Homalodisca vitripennis (glassy-winged sharpshooter): 124362161
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Entry
124362161 CDS
T09217
Name
(RefSeq) replication factor C subunit 1-like
KO
K10754
replication factor C subunit 1
Organism
hvi
Homalodisca vitripennis (glassy-winged sharpshooter)
Pathway
hvi03030
DNA replication
hvi03410
Base excision repair
hvi03420
Nucleotide excision repair
hvi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hvi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
124362161
03410 Base excision repair
124362161
03420 Nucleotide excision repair
124362161
03430 Mismatch repair
124362161
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hvi03032
]
124362161
03400 DNA repair and recombination proteins [BR:
hvi03400
]
124362161
DNA replication proteins [BR:
hvi03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
124362161
DNA repair and recombination proteins [BR:
hvi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
124362161
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
AAA
Rad17
AAA_22
AAA_30
AAA_18
AAA_14
RuvB_N
AAA_17
AAA_5
Zeta_toxin
RNA_helicase
nSTAND3
AAA_33
NTPase_1
AAA_16
AAA_28
AAA_assoc_2
SKI
Motif
Other DBs
NCBI-GeneID:
124362161
NCBI-ProteinID:
XP_046672365
LinkDB
All DBs
Position
5:complement(51000808..51055342)
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AA seq
914 aa
AA seq
DB search
MSRDIRSFFSVKKSSGNEKTQDVVKKPSQRKRVVVIDSDSDEETNRKSSKRSKTSVAVEN
PKEIKKEEDSKTKSKYFEPEKVNASDIFSSKPIKRDNARNIIKKAVPKEDKEFHIDKDLE
SELLNLDAVGLDILDKSTTDSHIISETDQDNSNSISLKSTDELNSVTNKQSPDLEKSTRA
EKQIDKTECDDIPRKKLKTKGDTFLSESINTFNKVKTSPVKTPETNNKYKSLSKLSLKSP
KKSPSENSLFKKSPSKKTLTSSTIPKTSPFKKSSSLDKPIHKNQNDKKELKKDSESNKAI
CSEPAVKSKDAKEKQHSTKHNEKAFSKTSQKDTNTLSKEKSVTSDMKLEEVSKLSSALSN
LWVEKYKPITTKQIIGQQGDKSCVNKLTTWLRNWHHNHSGQKKLVKPGPWVKNDDGAYFK
AALLSGPPGVGKTTTAHLVSRELGFDVVEFNASDTRSKKLLHQEVSELLSTNSLSPFFTG
KGDQVTKKHVLLMDEVDGMAGNEDRGGVQELIQLIKGARVPIICMCNDRNHPKIRSLSNY
CFDLRFSKPRTEQIKGAMMSLCYKEKLKLTPDALTEIIASANQDIRLIINHLSMLSMESS
GLANSTKHIKMGPWDVVRKIFSEEEHKSMSIHDKCDLFFHDYNVTPLFVQENYLNAVPHK
PEAKNKIKKIELFASAARSLSFGDLVEKNIRSHNAWSLLPVQAIFSSLVPGQVLEGHIGA
QINFPAWFGKNSRQTKMSRLLQELTVHSRLKISGNKEAMNLDYVVPLERSIVSPLVRDGS
AGIPQALSILSEYSLVREDLESLSELSSWPNTKTLFSEVESKVKAAFTRAYNKTSVPTPY
AAVPIKKGSKADFDSLDTVPEEEEDVPDVEEEEEDSLEVDSMIVVKKKTSAKKVDSAGPS
TSKGNKNSKRGRKK
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagggatatcagatcattttttagtgtgaaaaaatcttctggaaatgaaaagaca
caagatgttgtgaaaaagccaagccagagaaaaagagtagttgtgattgattctgattct
gatgaggaaactaacagaaaatcatctaagcgcagcaagacttctgtggctgttgaaaac
cctaaagaaattaaaaaggaagaagattctaaaaccaaatcaaaatattttgagccggaa
aaagttaacgcaagtgatatttttagctccaagccaataaaaagggacaatgcccgcaat
ataattaagaaagctgttcccaaggaggataaggaattccatattgataaagatttggaa
tcagaattgttgaatcttgatgccgttggacttgacatactggacaaaagtacgactgat
tctcacataatcagtgaaacagatcaggataatagtaattcaatcagtttaaaatcaacc
gatgaattaaattcagtaacaaataaacagagtcctgatcttgaaaaatccacacgtgca
gagaaacaaatagataaaactgaatgtgatgatataccaaggaaaaagcttaaaacaaag
ggggatacatttttgtctgaaagtattaatacatttaataaagttaaaactagtcctgtg
aaaacaccagaaactaataacaaatataagtctcttagtaaactatctctaaaatcgcca
aagaaatcaccatcagaaaattctttatttaagaaatctccttcaaagaagacattaacc
tcgagtaccattccaaagacatcaccgtttaaaaaaagttcgtctttagataagcctatc
cacaaaaatcaaaatgataaaaaggagttgaagaaagactcagaaagtaataaagctatt
tgctcagaacctgcagtaaaaagtaaagatgcaaaagaaaagcagcattctaccaaacac
aatgaaaaagccttttcaaaaacgtcacaaaaagatacaaatacattgtcgaaggagaaa
tctgtaacatctgacatgaaattagaagaagttagtaaattgtcaagtgctcttagtaat
ctgtgggtagagaaatacaagccaattacaacgaagcaaatcatcggccagcagggagac
aaaagttgtgtcaataaactgacgacttggcttagaaactggcaccataaccattcagga
caaaagaagttggtaaagcctggtccttgggtaaagaatgatgatggagcgtattttaaa
gctgctttactgtcaggtccacctggtgtggggaagacaactacggcccatcttgtttcc
agagagttggggttcgatgtggttgagttcaatgcttcagacactcggtcgaagaaactg
cttcaccaagaagtatcagagttgttgtcaactaattctttgtcgccatttttcacaggt
aaaggagatcaggtaaccaagaagcatgtgttgctgatggacgaggtagacggtatggct
ggcaacgaagaccgaggaggtgtacaagagctgatacagttgatcaagggtgcacgagtt
cctatcatttgtatgtgcaatgatcgcaaccatcccaagatacgcagcctctccaactac
tgctttgatttgcggttctctaaacccagaactgaacaaatcaagggtgcaatgatgtct
ctctgttataaggagaaattgaagctaactccagatgctttgacagaaattatagcgagt
gctaatcaagatataagattaataataaaccatctatccatgctttctatggaaagtagt
ggtttagcaaatagtacaaagcatataaagatggggccttgggatgttgtgaggaaaatt
ttctcagaggaagaacacaagtcaatgtctatacatgataaatgtgatttattcttccat
gactacaatgtaacgcctctctttgtgcaagagaactatttaaatgctgtccctcacaaa
ccggaggcgaaaaataaaattaagaaaatagagctgtttgcatcagcagcgaggagtttg
agctttggtgacttggtagagaaaaatattcgttctcataatgcttggagtcttctgcca
gtacaggcaatttttagttcattagttccagggcaagttttagagggccatataggggca
caaattaattttcctgcatggtttggaaaaaattcccgtcagacgaaaatgagtcgtctt
ctacaagagctgactgtacactccagactcaagatatcaggaaacaaagaagcgatgaat
ctggactacgtggtgcccctggagaggagcatagtttcaccactggtacgggatggttca
gctggtatcccccaagcactgtccatccttagcgagtacagtctggtccgagaggaccta
gagagtctgtcagaattgtcctcatggccaaacaccaagactttattttccgaagttgaa
agcaaggttaaagctgcattcaccagagcctacaacaaaaccagtgttccaacaccttac
gccgctgtaccaatcaagaagggcagtaaggcagattttgacagtttggacacagttcct
gaggaagaagaagatgtgccggatgtggaagaggaggaagaggatagcctggaagttgat
tcaatgatagtggttaagaagaagacgtcagcaaaaaaagttgacagtgccggaccttct
acctccaaagggaacaagaattccaaaagaggcaggaaaaaataa
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