Homalodisca vitripennis (glassy-winged sharpshooter): 124362253
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Entry
124362253 CDS
T09217
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
hvi
Homalodisca vitripennis (glassy-winged sharpshooter)
Pathway
hvi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hvi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
124362253
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hvi03021
]
124362253
Enzymes [BR:
hvi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
124362253
Transcription machinery [BR:
hvi03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
124362253
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
124362253
NCBI-ProteinID:
XP_046672556
LinkDB
All DBs
Position
5:57604064..57641373
Genome browser
AA seq
1121 aa
AA seq
DB search
MTGKTTLRNLTAPNYGKPSEAQNEFLKSLGEPHVASFNYILKEGIQQAIDNLTPAHFKVG
QKQVKLSIKSGYLLPAAVPPGTPGVRSPIIYPTECRQRGSTYKGTFHVILDWTVDGQPQP
SQDYAIGQIPIMVKSKACYLADMSPSQLINRKEHADEWGGYFIIKGHEKLIRMLLITRRN
YPIAVKRSSWKARGLLFSDLGIMIRCVREDHTSVNNVLHFVTDGTAKLMISHRRTLYYTP
IMLILRCLTDASDESVFKTIMAGYEDDLYFKGSVLNMLRSLHQQNIHTQEEAKFYLGKIF
RIRFSELPSWSTDEEICDFILKHCVCIHVDDYNDKFHCLIVMLQKLFSVVQEKSCVEGAD
AVMMQELLLGGHLYLQVLKDRLQGWLFMLRSIIQKKEQPGYELTKEELHSAVKKAGLVEQ
TMNNFLATGNIKTSSGLGLMQDKGLTIVAENINRMRYMSHFRAVHRGSFFQEMRTTEARQ
LLPDAWGFICPVHTPDGTPCGLLNHLTKYCQVTEPVDLEILHRLPEVLVSLGLQPLGSDS
GVPAADCYIAMLDGRLVGRVPHHSATRFVHKLRTLKIQGEKVPNTMEIAFVKEGGNQFPG
LFLFTGPARMVRPVYNLAAQQIELVGTFEQVYLDICITQKEAYPDITTHQELSKDSFLSN
LACLIPMPDCNQSPRNMYQCQMGKQTMGTACHTWDIQSETKLYRLQTPATPLFRPLHHDT
IALDDFPMGTNAIVAVISYTGYDMEDAMIINKASFERGFAHGSILKSEFIDLKSTSSYFG
LDPSKPELTQHLGIDGLPAPGTVLSGRVPYYCYYNALEAHYKVGMYSGQDPIVVDNVRLC
GSLPGSSDVPTRACITFRVPRNPSVGDKFASRAGQKGICSHKWPAEDLPFTESGLVPDIV
FNPHGFPSRMTIAMMIECMAGKSAAIHGLVHDASPFQFTEDDTAIDYFGKLLQAGGYNYY
GTERMYSGVDGREMTASIFFGVVHYQRLRHMVSDKWQVRSKGPVDVLTRQPVKGRRRGGG
VRFGEMERDALISHGASFLLQDRLFNCSDKYTAHICRTCGLLLSPVVSPSAREGHKTRLI
TCRICDNNGKIEEITIPYIFRFLVTQLASVNIKLQVNLSPS
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atgactggaaaaactacattaagaaacttaacagcaccaaactatggcaaaccatctgaa
gctcagaatgagtttttgaaatcgttgggtgaaccacatgtagcatcattcaattacatc
cttaaagaaggtatacaacaagctattgataatttgactccagctcattttaaggttgga
cagaaacaagtcaaactatcaattaagagtggataccttctcccagcagctgtcccaccc
ggcactccaggagtcagatctccaataatataccctacagagtgtaggcaaagaggcagc
acctacaagggcacatttcatgtgattctggattggactgtggacggccaacctcaacct
tctcaggactatgccatcggtcagattcccattatggtaaagtcaaaagcctgctacctg
gcagacatgagccccagccaactcatcaacaggaaagaacatgcagatgaatggggtgga
tactttataattaaaggacacgagaaactgatccgcatgcttcttataactagacgaaat
tacccgatagcggtgaaacgctcctcatggaaagcccgtggattgttgttctcagacctg
gggattatgatacgttgtgtaagggaggatcacacatctgttaacaatgttctacatttt
gtgacagacggtacagcaaagctcatgattagccatcgcaggactctgtactacacaccg
ataatgctgatcctccgatgtctcacagatgcatcagatgaatctgttttcaaaacaata
atggcaggctatgaggatgatttgtacttcaaagggtcggtgttgaacatgctgcgatct
cttcatcagcagaatattcatacacaagaagaagcaaaattctatttgggaaaaatattt
cgcattcgcttttcagaactacccagttggtctacagatgaagaaatttgtgactttatc
ctaaagcactgcgtgtgtatacatgttgatgactacaacgacaagttccactgtctcatc
gtgatgctccagaaactgttctctgtggtacaggagaaaagttgtgttgaaggtgccgat
gctgttatgatgcaagagttgttgcttggaggacacctttaccttcaggtgctgaaggac
agactccaaggttggctatttatgttgagatctattatacagaagaaagaacaaccagga
tatgaactgaccaaagaggaattacattcagctgtaaagaaagctggattggttgaacaa
accatgaataacttcctagccactggcaacatcaaaacttcctcaggtcttgggctcatg
caggataaaggcttgacaatagttgctgagaatatcaacagaatgcgctatatgtcacat
ttccgagcggttcatcgaggctccttcttccaagagatgcgaacgacagaagcgagacag
ttgttgcccgatgcttgggggtttatctgtccagtccacactcctgatggtactccctgt
ggtcttcttaaccacttgactaagtattgtcaggtgacagaaccagtggatctggaaata
ctacacagactaccggaagttctggtatcattaggtcttcagcccctaggctctgatagt
ggagtaccagctgcagactgctacatagccatgctggatggcaggctggtgggccgggta
ccgcatcactctgctactcggttcgtccacaaactgcgcaccctcaaaatacaaggagag
aaggtaccaaacacaatggaaattgcgtttgtgaaagaaggtggaaaccagtttccaggg
ttatttctgttcactggcccggctcgcatggtgaggccagtgtacaacttggcagctcaa
cagatcgaacttgtgggcacgttcgagcaggtttacttggacatttgtataacgcagaaa
gaggcctatcccgatatcacaacacaccaagaactgtccaaggatagcttcctgagcaat
ctggcctgcctaatccccatgcctgactgcaatcagagtcctcgcaacatgtaccagtgt
cagatgggaaagcaaaccatgggtacagcatgtcacacttgggacatccagagtgagacg
aagctgtacagactacagacgccagctacccctctcttccgacccttgcaccatgacacc
attgcgctcgatgactttcctatgggcaccaatgcgatagttgctgtcatatcgtatacc
ggctacgatatggaagatgcgatgatcattaacaaagcatcatttgaaagagggttcgct
catggttcaattctgaaatcagagttcatcgacttaaaatctacgagttcttactttggc
ttggacccctccaaacctgaactaacccaacacttgggaattgatggtctcccggcacca
ggaacagtgctcagcggaagggttccttactattgttattacaatgcgctggaagcccac
tataaggttgggatgtactcaggacaagatcccatagttgtggacaacgtgagactgtgt
ggctctctcccgggatcgtcagacgttcctaccagagcctgcatcaccttcagagtcccg
aggaacccgtcagttggagacaagtttgccagtcgagcaggacagaaagggatctgcagc
cacaaatggcctgcagaagacttgcctttcacagagagtggactcgtgcctgacatcgtg
ttcaacccgcacgggtttccttcacggatgacaatagccatgatgatcgagtgtatggca
ggtaaatctgcagcaatccatggcctcgttcatgatgcttcaccattccagttcactgaa
gatgacactgccatcgactatttcggcaagcttctccaggcaggtggctacaactactac
ggtacagagaggatgtacagtggtgtggatggcagagagatgacagcttccatcttcttt
ggggtggtccactatcagagactcagacacatggtgtcagacaagtggcaggttagaagt
aaaggtccagtggatgttttgacaagacagccagtcaagggtaggcgacgaggtggaggg
gtcaggttcggtgagatggaacgagatgctttgatatcgcatggggcatcatttctgctc
caagatcgactcttcaactgctctgacaagtacactgctcacatttgccgtacatgtgga
ctgttgctgagtccagtggtgtcaccatctgctcgggaaggtcacaagaccaggctcatt
acttgtcgtatctgtgataacaatggaaaaattgaagagatcaccattccctacatcttt
cgcttcttggtgacgcagctcgcatcggtcaacataaaactacaagtcaacctctctccc
agttga
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