Homalodisca vitripennis (glassy-winged sharpshooter): 124362292
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Entry
124362292 CDS
T09217
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
hvi
Homalodisca vitripennis (glassy-winged sharpshooter)
Pathway
hvi04136
Autophagy - other
hvi04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
hvi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124362292
04136 Autophagy - other
124362292
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hvi04131
]
124362292
03029 Mitochondrial biogenesis [BR:
hvi03029
]
124362292
Membrane trafficking [BR:
hvi04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
124362292
Others
Specific organelles associated proteins
Auto phagosome
124362292
Mitochondrial biogenesis [BR:
hvi03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
124362292
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
ATG16
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_WDR3_2nd
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_Aladin
Beta-prop_EML
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
NBCH_WD40
WD40_RFWD3
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_ACSF4
Tricorn_2nd
Beta-prop_VPS8
Beta-prop_SPT8
WD40_like
Beta-prop_SCAP
Cytochrom_D1
Beta-prop_Vps41
Frankia_peptide
Ribosomal_S30AE
Beta-prop_Nup120_160
Rod_CreS
Motif
Other DBs
NCBI-GeneID:
124362292
NCBI-ProteinID:
XP_046672619
LinkDB
All DBs
Position
5:complement(62162208..62397916)
Genome browser
AA seq
554 aa
AA seq
DB search
MFSMAVSGEVGSQTDWRNNLISQLQNRNRQQCKCFEDLILYHNQLFDTTLSLRNENLQLT
IQNEKLRQGSQSPSIYGGSDFSKISALEHKILSQQEELTELHKRRGENAQLLIDLNNKMQ
EKDKKIEVADKSLLENAKLITSLRAEIELYQRSNTELKALNQVLKDEHQALQLAFTHLEA
KLRKVQDENREIIDRLKQYKSKDAEKMNEENENFVRKKNAKMQKELEDAAKDMRGLSPDS
FSLNNVGPVLLCASVPTKPSLKFDAHESEISAVRWSPVDHVVATGGADRRVRLWDVSKGL
PESKGMLVGCNQGVMSVDFDSNCTHIICASNDFASRVWTVADQRLRHTLTGHSGKVMAAK
FLGESNKVVTGSHDRTLKIWDLRSKQCTQTNFVGSSCNDLVTSDGAGTTIISGHFDKTIR
FWDMRNEGSTNRIEVNGRVTSLDLSRDAKYLLSCVRDDTLRVLDLRMNQIVGTFGHDGFK
VGCDWSRAVFSSEGQYVAVGSVDGSIFIWEVATQKVQQILRDNHSSPVTAVAWHPYGNLL
ASVDRSRRTVVWSE
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgtttagcatggctgtgagtggtgaggttggttctcaaaccgattggagaaacaattta
atttctcagcttcaaaatcgtaatagacagcagtgcaaatgttttgaagatctcatatta
tatcataatcaactttttgataccacactgtctctgcgcaatgaaaacttgcagcttacc
attcaaaatgaaaaattaagacaaggcagccagtctccaagcatttatggtgggtcggac
ttcagtaagatatcggctttggaacataagattctaagtcaacaggaagagttaaccgaa
ttgcataaacgtagaggagagaatgcacaactactaattgatctcaacaataaaatgcaa
gagaaggataaaaaaattgaggttgctgataagagccttctggagaatgccaagctaata
accagtttacgagcggaaatagagctatatcaaaggagtaacacagaacttaaagcctta
aatcaggttctcaaagatgagcatcaggccttgcaattggcatttactcatctggaagct
aaattgagaaaagttcaggatgaaaatcgggagatcattgacagattaaaacaatataaa
tctaaagacgctgaaaaaatgaatgaggaaaatgagaattttgtgaggaaaaagaatgca
aagatgcagaaagaactagaagacgctgccaaggacatgaggggactgtccccagatagc
ttctcccttaacaacgttggtcctgtgttattgtgtgcctctgtacctaccaaaccttca
ctcaagtttgacgcacacgagagtgaaataagtgcagtgcggtggagccccgtggaccac
gtggtggcgacgggaggtgcagaccgccgtgtcagactctgggatgtttccaaaggactg
cctgagagcaagggaatgctggttggctgcaaccaaggtgtaatgtcagtggattttgac
tccaactgtactcacatcatctgtgcctccaatgactttgcctccagggtgtggaccgtt
gcagaccagcgactgaggcatacccttactggtcacagtggtaaggtgatggcagccaag
ttcctgggagagtccaacaaagtcgtcactggcagtcacgaccgtacacttaagatttgg
gacctcagaagtaaacagtgtacacagaccaactttgtagggtcgagctgtaacgatttg
gtgacatcagatggagctggcactacaatcatcagtggccacttcgataagactattcgc
ttctgggacatgagaaatgaagggtcgaccaataggatcgaggtcaatggcagggtaaca
tcactggatttatctagagatgcaaaatatttgctgagctgtgttcgagatgacaccttg
cgagttttggatctgaggatgaaccaaattgttggcacatttggtcatgatggattcaaa
gtgggctgtgattggtctcgagctgtgttcagttcggagggtcagtacgtcgccgtcggc
tctgttgatggctcaatcttcatatgggaagttgcaactcagaaagtacaacagatcctc
agagataatcactcgagtcctgtgaccgctgttgcatggcatccgtatggcaacctactg
gccagtgtggaccgttctaggcgcacagtggtctggtctgagtag
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integrated database retrieval system
