KEGG   Homalodisca vitripennis (glassy-winged sharpshooter): 124362476
Entry
124362476         CDS       T09217                                 
Name
(RefSeq) DNA repair endonuclease XPF isoform X1
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
hvi  Homalodisca vitripennis (glassy-winged sharpshooter)
Pathway
hvi03420  Nucleotide excision repair
hvi03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:hvi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    124362476
   03460 Fanconi anemia pathway
    124362476
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hvi03032]
    124362476
   03400 DNA repair and recombination proteins [BR:hvi03400]
    124362476
DNA replication proteins [BR:hvi03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    124362476
DNA repair and recombination proteins [BR:hvi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     124362476
SSDB
Motif
Pfam: ERCC4
Other DBs
NCBI-GeneID: 124362476
NCBI-ProteinID: XP_046672972
LinkDB
Position
1:complement(59132554..59183596)
AA seq 836 aa
MTAAEMLEYENQMFLDVLHENGLLVAARGLRLETVIMNLMKVYCDPGNLVLVLGTASREE
EYFVTELERQGVSPLPRVITSDVTNTERERVYLEGGVLMVSARILVVDLLKQRVPVAHIT
GFIVLRAHKILESCQEAFALRLYRQDNKTGFVKAFSSSPESFTVGFARIERIMRSLFVKN
LFLWPRFHATVNSSLDKRKAMVIELHVPFTPLMSTIQTAVLDLVHFCVKEIKRINPSLET
DSITVENALSKTFHKLLQLQLDPIWHQLSANTKQLVADLKILRSIITTLTQGHSVRLQAL
LLTLRSSDYAKRSSGWIMLDSAETLFVSAKKRLYNSKQEVAPEMNPKWQTLSEVLKEIHG
DSGGSSQTVLILVETLATCRQLKQYLTKGGPAMLQDLYKKLLGKKVTSNEPMQIDNVEEE
EEEGHVFTLTQTTSEDSESAKYTECTTQLDSASEPVVVLQQFKPDGEPLSLPSTLRSLKP
KYIVMYDVDVTAIRQIEVYQSSESECQIQVYFLIYGGSVEEQAYLTTLRREKEAFDFLIK
EKSTMVVAADQEGKGTDCSELSRDIGQSAVPSVNTRRGGNAEPNTRPRVIVDMREFRSEL
PALLHRRGIDIDPITLQIGDYILTPEMCVERKSISDLIGSLNSGRLYQQALAMCRHYVKP
MLLIEFDQNKPFALQGRYYLSSDLQSSDITAKLQLLTLHFPRLRLVWSPSPYATAQLFHE
LKEGKDEPVASVAAAVGLEGTTLEDDVHIEKYNTAIHDFVSKLPGVNTKNLVSLMNKGES
LDHLMTLSKEQLGDLISNSQNGVLLHDALHKPLKAPTEATSFRGRARGRGFRRRKT
NT seq 2511 nt   +upstreamnt  +downstreamnt
atgacggcagcagaaatgttggaatacgagaaccagatgtttctggatgttcttcacgaa
aacggattgcttgttgcagcaaggggtctgcgactggaaactgtgataatgaacctaatg
aaggtgtactgtgaccctggtaacctcgtgttggtcctcggcacagcctccagggaagaa
gagtactttgtaacggagctagagcgtcagggtgtctcgcctctgcctcgtgtcatcacg
tcagacgttaccaacacggaaagggagcgagtgtacctggaaggaggagtactgatggtc
tcagctcgtatactggtggtagacctgctgaaacagagagtacccgtggctcatatcacc
ggcttcatcgttctaagggcccacaagatcctagaatcttgtcaggaggcctttgctctt
cgattgtataggcaagataataaaacaggatttgtaaaagcgttttcatcttcccctgag
tcattcactgttggttttgctcgtattgaaagaatcatgaggtctctgtttgtgaagaat
ctctttctctggccacgattccacgccacagtcaactcgagtctggataagcgtaaggca
atggttattgaactgcatgtgcccttcacccctctgatgtccaccatccagactgctgtc
ctggaccttgtccacttctgtgtcaaagagattaagaggataaatccatctttggaaact
gactccatcacagtggagaacgctctgtcaaagaccttccacaagctgctgcagctgcaa
ctcgatccgatctggcaccagctaagtgccaacactaagcaattggttgctgacctcaag
atactgcgctctataatcactaccctcacccaaggccacagtgtgcgtctgcaggcattg
ctgttgactctacgcagcagtgactatgccaaacgaagctcaggctggattatgcttgac
tcagctgaaactctctttgtctctgccaagaagcgactgtacaatagtaagcaggaagtg
gctccagaaatgaaccccaaatggcagacactgtctgaggtgctgaaggagatccatggg
gattctggagggagcagccagacagttttaatactcgtggagactcttgccacatgtagg
caactcaagcagtatttaacaaaaggaggtccagcaatgctgcaggatctgtacaaaaaa
ctgttgggcaagaaagtaacttccaatgaaccgatgcagatagataatgtggaagaggaa
gaagaggaaggacatgtcttcactctgacccagactacttcagaggacagtgaaagtgcc
aagtacacagagtgcaccacacagctggactcagcatcggagccagtggtagtgctgcag
cagttcaaaccagatggagagcccctatcactgccttctacactgcgctcactcaagcct
aagtacatcgtcatgtatgacgttgacgtcacagctataaggcagatcgaggtgtaccag
agttcagagagtgagtgtcagatccaagtgtatttcctgatctacggaggctcggtggaa
gagcaggcatatctgacaactctcaggcgagagaaggaggcctttgacttcctcatcaag
gagaagtctacaatggtagtagcagctgaccaggagggcaagggaacggattgcagtgag
ctgagtcgggacatcggccagtcagcagttccctctgtcaacactcgcagaggtggcaat
gctgaacccaacaccaggcccagggtcattgtggatatgagggagttccgcagcgagttg
ccagccttgcttcatcggcggggcattgacattgacccaatcacattgcagatcggggac
tatatcctgacaccagagatgtgtgtggaacggaagagcatcagtgatctgattggttcc
ctcaactcaggccgattgtaccagcaggctctggccatgtgtcggcactacgtcaagccc
atgctgctcatagagttcgatcagaacaagccattcgccttgcagggccgttattacctg
agcagtgatctacagagcagtgacatcacagccaagctccaactgctgactctccacttc
cccaggctgcgactggtgtggtcccccagcccttatgccacagcacagctctttcatgag
ctcaaggaagggaaagatgagccagtggcatctgtggctgcagctgtgggacttgaaggc
accactctggaggatgatgtgcatattgagaaatacaacactgccatacatgactttgta
agcaaattgcctggagtgaacaccaagaaccttgtgtctctgatgaacaagggcgagtcc
ctagaccacctcatgacactgtctaaggaacagctgggagatctcatcagcaacagtcag
aacggggtgttgctccacgatgctctccacaagcccttgaaggctccgactgaggctacg
tctttccgaggacgggccagagggcgaggcttccggcgacggaagacctag

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