Homalodisca vitripennis (glassy-winged sharpshooter): 124362507
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Entry
124362507 CDS
T09217
Name
(RefSeq) nuclear pore complex protein Nup50
KO
K14295
nuclear pore complex protein Nup50
Organism
hvi
Homalodisca vitripennis (glassy-winged sharpshooter)
Pathway
hvi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hvi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124362507
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hvi03019
]
124362507
Messenger RNA biogenesis [BR:
hvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124362507
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUP50
Ran_BP1
Motif
Other DBs
NCBI-GeneID:
124362507
NCBI-ProteinID:
XP_046673026
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All DBs
Position
5:91908964..91936366
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AA seq
453 aa
AA seq
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MAKRTASSDINHDNWDAPFVPEEAGSFKIAAQAALQKRVIKTAKRRIKTSESSDAGKSLF
ASFGGFKPNAASQGSDTSKTFSFLSSGPVTTSSNTSMPTNGTKFVTPQPRFEMTNSNIPS
VNRPQQKYLSDLKELNQSVVAWIKKHVESDSHCILSPVFEDYNKHLTKIRAERDAAEKAS
SVVSSTPASSLSSFNFVSSSTSDNKFTINIPTTSVDSDETKIVLNSTMSSSDCKTSPSIF
GLKGESGKSPLLQGAETGTSKTPSIFSSFKDSSTTGSSLLAKPDPAALMVNPFTSTLTKP
FSFSNGSTPTSSSNNQQQEKEEEKEEEVEESDEPPKVVFTPVQEEGSVFSTRCKVFVKKD
NNYKDRGVGTLFIKKVGEEKYQLLVRAETVLGNVLVNVLLNNSIPTQRMGKNNVMLVCLP
TPQDLPPPTTILLRVKTDVEADDLLATIEQYKQ
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaagaactgcatcatctgacataaatcatgacaattgggatgctccttttgta
ccagaagaagccggatctttcaaaattgcggcccaagctgctctccaaaagcgagtgatc
aaaacagcgaaacgaagaattaaaacttctgaaagtagtgatgctggtaagtccttgttt
gcctctttcggtggattcaaaccaaatgctgccagccaaggttcggacaccagtaaaact
ttttcattcctgagcagtgggccagtgaccacgagttctaacaccagtatgcccactaac
ggcacaaagtttgttacaccccagccacgttttgaaatgaccaatagcaatataccaagt
gtgaacagaccgcaacagaagtacctgtctgatctgaaagaactgaaccagagtgtggtt
gcctggataaagaaacatgtagaatccgattcgcactgcattctcagtcccgtattcgaa
gattacaacaaacatttaactaaaatccgggcagagcgagatgctgcagagaaagcatct
tcagtagtctcgtctacaccagcttccagtctttcatcgttcaacttcgtgagtagcagc
acgagtgacaacaaattcactattaatatacccacgacgtcggtagacagtgatgaaact
aaaattgtgttaaactctacaatgagttcgtctgattgtaaaacaagtccgtcaatattt
ggattaaaaggagaatcaggaaagagcccacttctgcaaggagcggagacgggaacaagc
aagactccttcaatatttagttcattcaaggacagctcaacaacgggatcaagtttgctg
gccaaacctgatccggctgcgctcatggtgaaccccttcacctcaacgctcaccaaacct
ttctcattcagtaacggatctacaccaacaagttccagtaacaaccagcagcaagaaaag
gaagaggagaaggaggaagaggtagaggaatcagatgaaccacccaaggttgtgtttacg
ccagtgcaagaagagggttctgtgttttctacaaggtgtaaagtgttcgtaaagaaagac
aacaactataaggaccgaggggtggggacattgtttattaagaaggtgggggaagaaaag
taccagctgttggtgcgagcagagacagtgctggggaatgtgctggtaaatgtgctgctc
aataacagcattcctacacaacgaatgggtaagaataacgtgatgctggtatgtctgccg
acaccgcaagatttgccaccccccaccactattttgctacgtgttaaaactgatgttgaa
gctgatgacttgctggcaaccattgagcaatataaacaataa
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