Homalodisca vitripennis (glassy-winged sharpshooter): 124362519
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Entry
124362519 CDS
T09217
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
hvi
Homalodisca vitripennis (glassy-winged sharpshooter)
Pathway
hvi04080
Neuroactive ligand-receptor interaction
hvi04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
hvi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
124362519
04082 Neuroactive ligand signaling
124362519
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hvi04040
]
124362519
Ion channels [BR:
hvi04040
]
Ligand-gated channels
GABA-A
124362519
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Ortholog
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Gene cluster
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
EOS1
MscS_TM
Phage_Gp23
PIG-P
Motif
Other DBs
NCBI-GeneID:
124362519
NCBI-ProteinID:
XP_046673052
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All DBs
Position
5:complement(92629427..92650685)
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AA seq
558 aa
AA seq
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MSTSAAVAATRLGFLSLYLTLWGLACVHQVAGYNTGFTANVSRTLDNLLAGGRYDKRIRP
DMGGPPIVVAVNMHIKSFGPISETGQSYTMDVYFRQTWHDSRLRYSLQGLDEFSMSWLFL
DKVWKPDTYFMNGKTSHLHRITSPNKFLRLRQDGYIVYSMRLTISARCKMHLRKFPMDTQ
RCPLLIGSYGYSTNEIVYKWEPGVTVEPGLELSQYDLANISVVGHHKFIRNVGEFSMIKA
NFLLRRNLGYYVLQMYVPCCLIVCCSFVSFWINPDDVPGRVTLAAMTVLSITTLGFIGRA
ALPKVNYATALDWFVILCFVTVFAVLVEYAIINFIDKIRVDIKRLLEERKKQQELREAQK
EESGPEDEEEDEEEAILGKELDMDVEVTPIPLAVPKILMTYEMEDLEDEGHSSAGETEDL
DSLKVEHLAVPLAETKLKVTRSYSVPTMTRGEYRFDHPRLVQDTSIDILLDQHQEPLAAR
VTLRSTLLIPVNMLKRLHILPTEEEVAASTEPPDKFSAIDIYSRLIFPLTYITLLTCYYL
IYTYYMVDDKERYLDKYN
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgtccacctctgccgctgtcgctgctacccgtctcggcttcctgtccctgtacctgacg
ctgtgggggctggcatgtgtgcatcaggtggcagggtacaacacaggcttcactgcgaat
gtgtcgcggaccctggacaatctgctggcaggggggcgctatgacaaacggatccgcccc
gacatgggaggaccacccattgtagtagcggtaaacatgcacatcaaaagcttcgggcct
atttctgaaaccgggcagtcttacacgatggatgtgtactttcgtcagacctggcacgac
tcgcgacttcgctacagcctccagggtctggatgaattttccatgtcttggttgttcctg
gacaaggtctggaagccggatacttacttcatgaacgggaagacatcgcacctccacaga
atcacgtctcccaacaagtttctgaggcttagacaggatggatacatcgtctactcaatg
aggctcaccatctctgctcgctgtaaaatgcatctccgcaagtttcccatggacacacag
cgctgccccttactcatcggaagctatggatacagtactaacgagatcgtgtacaagtgg
gaacccggcgtgaccgtggaaccaggcctggaactatcacagtacgatttagccaacatt
tcggtcgttggtcaccacaagttcatcaggaatgttggtgagttttcaatgataaaggcg
aacttcctgcttcgaaggaatctaggttattacgttctacaaatgtatgtcccttgctgc
ctcatagtctgctgctccttcgtgtccttctggatcaaccctgacgacgtccctggaaga
gtcaccttagcggcgatgacagtgctgtccattactacgcttgggttcatcggcagagca
gctcttcccaaggtgaattacgctacggcactcgattggttcgttatcctctgtttcgtc
acggtgttcgctgttttggtggaatatgccatcattaacttcatagataaaatccgtgtg
gatatcaagcgactcctggaggaacgtaagaaacaacaagagctccgcgaggcccaaaag
gaagaatcagggcctgaggatgaggaggaagacgaagaggaagctatactgggtaaagaa
ctggacatggatgttgaggtgacccctattcctctggctgtgcctaagatcttaatgacg
tacgaaatggaagacttggaggacgaaggccacagctctgctggagagactgaagatttg
gactccttaaaagtggaacatctagcagttccactggctgagacgaagctgaaggtgacg
cgaagttactctgtcccgaccatgactaggggagagtatcgctttgaccaccccagactt
gtccaggacacatctatagatatcttgctagatcagcatcaggaaccgcttgctgccagg
gtgactcttcgtagcacgctgctgattcctgtcaacatgctgaagcgacttcacatcctg
cccacagaagaggaggttgcagcatccactgaacccccggacaagttttcggctatagac
atctacagcaggcttattttccctctaacttacattacgctgcttacctgctattacctg
atatacacatactacatggtggacgataaggaacgatacttagataaatacaactga
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