Homalodisca vitripennis (glassy-winged sharpshooter): 124362679
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Entry
124362679 CDS
T09217
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
hvi
Homalodisca vitripennis (glassy-winged sharpshooter)
Pathway
hvi04120
Ubiquitin mediated proteolysis
hvi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hvi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
124362679
04120 Ubiquitin mediated proteolysis
124362679
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hvi04121
]
124362679
Enzymes [BR:
hvi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124362679
Ubiquitin system [BR:
hvi04121
]
Ubiquitin ligases (E3)
U-box type E3
124362679
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
124362679
NCBI-ProteinID:
XP_046673336
LinkDB
All DBs
Position
5:complement(107325256..107366628)
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AA seq
1114 aa
AA seq
DB search
MSELSQEEIRRKRLARLEVNSASPGPSTSGSQPVSPSPSYNVSPFTPPVPPAPGDRGTPP
PQKSDSQSTDTSSQMEVEDYSQSEEKNNVVSNSQVDVDSGIENMEVEESKEVTQNRTSST
SDSTEDQVQATISRVLCVSWSQGNQSDSSIFLPETAAGMSQRKQEGDGTPDTQDLISQSL
MEVMCQIASGENPMPSPLTCSTPDDSNENIAEASSSQNNTSTVPPPSLATTGLTYLTDTY
ARVANEERNNPKRSSMPPLKEVLAEVRAQCVQHTSLMLQDVLVEEVDFTGRLGPLSSPLL
QPVLKQTLPRGFLLELLARTHSNPDTLNKVFSPLLQGLYRAMQGASVVGNSHRKPLEALS
DLVDMRVGPTASLRPICHLITHQVQFLPDIVTGAAGREIARTSFLGPFLSISVFAEDEPK
VADRFFSGNASNDKPLQSTLQQELENSRILLHKIFHDVLVNSSSREAMLAYIAALLRNNE
KRSQIRAEERALAGDGFMLNLLSVMQLLAVKVKLHTVDPLYPFHPSSMVDIKNDTRLKLT
STETSSWLDELNKSEQTVWKEPKFPTQCWFLTLHCHHLALMPTLQKYQRRLRALRDLQKL
VEEMQSSESHWKSLPFASRNKELIKRWKQQIKKLTRSKACADAGLLDDNLMRRALLFYTS
VAEFLLRILSDNPLNPSLPLPADTPQLFSAFPEWYVEDIAEFLLFALQFVPGVIATSMDH
SMITWLLVAVCSPHCIKNPYLVAKIIEVLFVLNPGIQAHTEDLYSRVMAHPISEHHLPSC
LMKFYTDVETTGSSSEFYDKFTIRYHISLILKGMWESTVHRQAIVNESKSGKQFVKFINM
LMNDTTFLLDESLESLKRIHEVQELMADSDAWNRIGMEQQQVRSRQLSADERQCRSYLTL
ARETVDMFHYLTVDIKEPFLRPELVGRLSAMLNFNLQQLCGPKCKNLKVRTPDKYGWEPR
RLLGQLVDIYLHLDCDQFAAAVASDERSFRKELFDDAALRMERALIKTPIELEKFRDLAK
KAAEIVVQNMKREVDFSDAPEEFRDPLMDTLMEDPVLLPSGKIMDRDTIIRHLLNSSTDP
FSRQPLSEDMLQPAPELKERIQSWKREKLKNQSS
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaacttagccaggaagaaattagaaggaaacggttagccagacttgaagtaaac
agtgcaagtcctggccccagcaccagcggcagccagccagtgtccccctcgccctcctac
aatgtcagccccttcactcctccagtgccaccagctccaggtgatagaggtacaccacca
ccccagaaaagtgattcacagagtacagatacatcgtcccaaatggaagtggaagattat
tctcagtcggaagagaaaaacaatgttgtgtcgaactctcaggtggatgtagactctggt
attgaaaacatggaagtagaagaatctaaagaagttacacaaaatagaacatcatcaaca
agtgattctacagaagaccaggtccaggcaacaatatccagagtcctttgtgtttcgtgg
tctcaaggcaatcagagtgactcgtctatattccttccagagactgcagctggcatgagt
cagagaaagcaagaaggagatggcactcctgatactcaggatctaattagccagtcatta
atggaggtgatgtgtcaaattgcttctggagaaaacccgatgccctccccgctcacttgt
tctacaccggacgatagcaatgagaacattgcagaagccagcagcagtcagaacaatacg
agcactgtaccgccgccatcactcgccactacaggtcttacctaccttacagatacttat
gccagggtcgccaatgaagagagaaacaatcctaagaggagtagtatgccgccactgaaa
gaggtgctagctgaagtacgagcccaatgtgttcaacacacgtctctgatgctgcaagat
gtgctggtagaagaggtagacttcacgggccgtctggggccactgtcctcacccctgctg
cagcctgtgctcaagcagactctgccacggggcttcctactggagctgctggctcgcacc
cactccaacccagacacacttaacaaggtgttcagtcccctgctgcagggcctgtatcga
gccatgcagggagcctcggttgtagggaacagtcaccgcaagccactggaagctctcagt
gacctggtagacatgagggtcggccccactgccagcctgcgacctatatgtcatcttatc
acacatcaggtgcagtttttaccggatatagtaacaggtgctgcgggccgagaaattgct
cgaacgtctttccttggtccatttctcagcatatcggtttttgcagaggatgaacctaaa
gttgcagatagattttttagtggaaatgcttccaatgacaaaccactccaatccacatta
caacaagaattggagaattctaggattctgctgcataaaatattccatgatgtactagta
aacagcagctcaagagaagccatgttggcgtacattgcagctcttctgcggaacaatgag
aagcggtcacagatacgagccgaggaaagagcgttagctggggacggcttcatgctcaac
ctgctgtcagtcatgcaactgttggctgtcaaggtcaagctgcacacagtcgacccactg
tatcccttccatccttctagcatggttgatatcaagaacgacactcgactcaagctaacc
tcaactgaaacttcctcgtggctagatgaactgaacaaatccgaacagaccgtgtggaaa
gagcccaagttccccactcaatgttggttcctgacattacactgccatcacttagcgctc
atgcccaccttgcagaagtaccagagacgtctcagagcactcagagatcttcagaaactg
gtagaggaaatgcagagtagcgaatcgcactggaagtctctgccttttgcctcaagaaac
aaagaactgatcaaacgatggaagcaacaaatcaagaaattgactcgcagtaaagcgtgt
gcggacgctggcctgttggatgacaacttgatgcgaagggcgctactgttctacacctca
gtggcagagtttctgctgaggatattgtcggacaatcctctcaaccccagccttccactg
cctgccgacacacctcagctgttctctgccttccctgagtggtatgtcgaagacatcgca
gagtttttgctgttcgctcttcagtttgtgcctggagttattgccacatccatggaccat
tcgatgatcacatggctgctggtggcagtctgttccccccactgtatcaagaacccatac
ctggtagctaagatcatagaggtgctgtttgtgcttaatcctggtatccaggctcacacc
gaggacctgtacagccgtgttatggcccaccccatctccgaacatcacctgccctcctgc
ctcatgaagttctacactgatgtagaaacaacagggtcgagctccgaattctatgacaag
ttcacaattcgttatcacatcagcttgattctgaaaggcatgtgggaaagcactgtccat
agacaggctattgttaatgagtccaaatcaggaaagcaatttgttaaatttatcaacatg
ctaatgaatgatacaacattcttgctggatgagagtttagaaagtttaaagcgtatacat
gaagttcaagagctgatggccgactcagatgcgtggaacaggatcggcatggagcagcag
caggttcgcagcagacagctgtcagcagatgagcggcagtgcagatcgtacttgacactg
gctagagagactgtggacatgttccactatctgacagttgatattaaggaaccatttctc
cgtcctgaacttgtgggcaggctctctgcaatgctcaacttcaaccttcaacagttgtgt
ggccccaaatgtaagaatctgaaagtgcgcacacctgacaagtacgggtgggaaccgaga
cggctgctgggtcaacttgttgatatctacctgcatctggactgtgaccagttcgctgct
gctgtagcttctgatgagaggtctttccgaaaggaactatttgatgatgcagctctaaga
atggaacgggctttgatcaagacaccgattgaattagagaaatttcgggacctagcaaaa
aaagctgcagagatagtggttcagaatatgaaacgagaagttgacttcagtgatgcccct
gaagaatttagagatcccctcatggataccttgatggaagacccagtactcttgcctagt
ggtaagattatggaccgagacacaatcataagacatctgctcaactcttccactgaccct
tttagcagacaacctctttcagaggacatgttgcagccagctcctgaattgaaagaacga
attcaatcgtggaaaagagaaaaactgaaaaaccagtcctcttga
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