Homalodisca vitripennis (glassy-winged sharpshooter): 124362728
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Entry
124362728 CDS
T09217
Name
(RefSeq) X-ray repair cross-complementing protein 5-like
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
hvi
Homalodisca vitripennis (glassy-winged sharpshooter)
Pathway
hvi03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
hvi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
124362728
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hvi03400
]
124362728
DNA repair and recombination proteins [BR:
hvi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
124362728
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_PK_bind
Ku_N
VWA
Sigma70_r1_1
Ku_C
Motif
Other DBs
NCBI-GeneID:
124362728
NCBI-ProteinID:
XP_046673417
LinkDB
All DBs
Position
5:complement(112945566..113011866)
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AA seq
685 aa
AA seq
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MSRKSKPMEAVVLLIDIGEPVSHEDKDGQSFLLKSKQCASRIIQRKIFSDATDQFSLIFV
GSSKTDNDLNYPHIEVKQKWFVPPNWDLLKAVDDMKATDVKSADWLDGLIVAVNLLKHET
EGRKFTSQKIVMLSNFATRLQSQDHVEEVIETLKDMQINLVVIGPDIDDDLSSEETKSNI
QQKGEVLIGRIVDEVDGVICGFAEAMLQLDHFQKCVGKAAPWHCNLDIGEEISIPITGYK
KFAPKKMLTWKKKSIENTPVVEETVFLLGDEEVDKADVIHGYLFGRTVVPISGEDKMSMA
IKTQKCFDVIGFTKKQNVPRHMFMGDSAHYIVPRKGIKGAQIAVTALVKALLEESMVAIV
RKVYSKNSAPKIGALIPTCEDEFYFFYYVQLPYAEDERRVKLPSLSKVQLSQDQFDAIGQ
LIDDMDLTQLDEDEDPYSQLINPAVEHLNNMVVFKALHPDSKLPSELSVNIKKMLQPKPE
ILEKASTSLDKIRTLFKLEEVEQKSYRKEAADLFKSSTSNGIEVEVKPEDLADSIVGLVR
STVTEIGTVDPEGDFLKLKELGEPFGKICDQMQNVIKKLIFLSSDTVGTRKPLAALTLLR
EHCKKLSPLAYNRFVASIKDDLIEIGHSEFWEKIVQDKLGLITSVENEESTVSPDEADTF
YQIKTCELQSEQDYELEAEDMLDML
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgagcagaaagtctaaacctatggaagctgttgtacttcttatcgatattggagagcct
gttagtcatgaagataaagatggtcagtcatttctactaaaaagtaagcagtgtgcttca
agaatcattcaacgcaagatattttcggatgctactgatcaattcagtctcatttttgtt
gggtcaagcaagacggataatgacctgaactacccccacatagaagtgaagcagaaatgg
tttgtgccacctaactgggatttgttgaaggccgttgatgacatgaaggctactgatgta
aaaagtgcggactggttagacggcttgattgttgctgtcaatcttctgaagcatgagacc
gagggcagaaaatttacgagccaaaaaattgtaatgctgtcaaattttgccacacgtttg
cagtcacaggatcacgttgaagaggttattgaaacattgaaagatatgcaaataaacttg
gtagtaataggtcctgacattgatgatgatctatctagtgaagaaacaaagtccaatatt
caacagaaaggagaagtcctcataggcaggattgtggatgaagtagatggagtaatatgt
ggatttgcagaagctatgttacaattagatcattttcaaaagtgtgttggaaaagcagca
ccctggcactgtaatttagacattggagaagaaatatctataccaattaccggatataag
aaatttgctcctaaaaaaatgcttacttggaagaaaaagagcattgaaaatacaccagta
gtagaggagacagtgttcctactaggagatgaagaggtagacaaggcagatgtcattcat
ggttacttatttggcagaactgttgttcctatatcaggagaggacaaaatgtcaatggca
ataaaaacacaaaagtgttttgatgtaattggctttacgaagaaacagaatgttccacgc
cacatgtttatgggtgactcagcacactacattgtaccaaggaaggggatcaagggagcc
caaatagcagttacagctttggtgaaagctcttctagaagaaagcatggttgctattgtc
cgtaaagtctatagcaagaacagtgcccctaaaataggagctttgataccaacttgtgag
gatgaattttatttcttttattatgtgcaactgccttatgctgaggatgagcgtagggtg
aaacttccttcgctgagtaaagttcagctctcacaagaccagtttgatgctattggccaa
cttatagacgatatggacctcacgcaactagatgaggatgaagatccttacagccagttg
ataaatcctgcagtggagcacttgaacaacatggtcgtctttaaagcactccatcctgat
tcaaagttaccatcagaattaagtgttaacataaagaaaatgctacaacccaagccagaa
attcttgaaaaagcctccacctctttagataaaattagaacactgtttaaacttgaagag
gtagagcagaaaagttaccggaaagaagcggcagatctctttaaaagttctacaagcaat
ggtatagaagttgaagttaaacctgaggatttggctgattcaattgtaggattagttcga
agcacagttactgaaataggaacggttgatcctgaaggtgattttctcaaattaaaggaa
cttggtgaaccttttgggaaaatctgtgatcaaatgcagaatgttatcaaaaaattgata
tttttgtcaagcgacactgttggaactcgtaaaccactcgcagctctcacattactacgt
gaacactgcaaaaagctgagccctttggcttacaatagatttgttgcgtcaatcaaagat
gacctgatagaaataggacacagtgagttttgggagaaaattgtacaagataaacttgga
ttgataacatctgtagaaaatgaagaaagcacagtaagccctgatgaggcagacacattt
tatcagataaagacatgtgaattacaaagtgaacaggattatgagttggaagctgaagac
atgctggatatgctgtaa
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