Homalodisca vitripennis (glassy-winged sharpshooter): 124362897
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Entry
124362897 CDS
T09217
Name
(RefSeq) pre-mRNA-processing factor 17
KO
K12816
pre-mRNA-processing factor 17
Organism
hvi
Homalodisca vitripennis (glassy-winged sharpshooter)
Pathway
hvi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hvi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124362897
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hvi03041
]
124362897
Spliceosome [BR:
hvi03041
]
Complex C
Other components
Step II factors
124362897
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
EIF3I
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_EML
WD40_RFWD3
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_SPT8
WDR90_beta-prop_4th
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_DCAF12
PQQ_2
Beta-prop_NWD2_C
Beta-prop_NOL10_N
Motif
Other DBs
NCBI-GeneID:
124362897
NCBI-ProteinID:
XP_046673728
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Position
5:complement(130901758..130918557)
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AA seq
565 aa
AA seq
DB search
MLQIQQYSDSGDSDPDENQTAHLKPLESGKSISTISLAVCAAPDVTPTGPSDSLQFVDIT
TKELTRNLKYEELFAPEVGPENPFLTQQQRAKKNMLAGFVEQAHISEFQFENQRRTFSSY
GYALDPTVDCESEGKTVVGATLAAADSAMKTVFEASTKRPLDKRKRNKNDDPSDIEGFLG
PWGCYEDEKRVMKPNEAEAEELEEYLAKKQKRGKQTDDKPLEEKTVLHIKDSVDYQGRSF
LHVPQDVGVNLKSETPPDRCFLPKSHVHTWQGHSKGISAIRWFPHSAHLLLSCSMDCRVK
LWEVYKERRCIRTYYGHRQAVRDIAFNNPGTQFLSAAYDRYIKMWDTETGECISRFTSRK
IPYCIKYHPDDDKQNLFVAGTSDKKIICWDIRSGEIVQEYDRHLGAVNTITFVDENRRFV
TTSDDKSLRVWEWDIPVDMKYIADPSMHSMPAVTPSPNHKWLACQSMDNKIVIFSALNRF
KLNRKKTFSGHMVAGYACSLDFSPDMSYIISGDADGKAYVWDWKTTKLFSKWQAHDNVCI
AVLWHPHEPSKVATAGWDGLIKYWD
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaaattcaacagtacagtgatagtggggattcagatcctgatgaaaaccaaact
gcccatttaaaacctcttgaaagtggaaagtctatttcaacaatttcgttagcagtttgt
gctgctcctgatgttactccaacgggaccatctgatagccttcagtttgttgacatcact
acaaaagagctgaccagaaatcttaaatatgaagaactattcgctcctgaagttggtccg
gaaaatccattcctgactcagcaacagagagcaaagaagaacatgcttgcaggatttgta
gaacaagcacatataagtgaatttcagtttgagaatcaacgaagaacattcagtagttat
ggatacgcactggacccaactgttgactgcgagagtgaaggcaagactgttgtcggagct
acattagcagctgcagattcagccatgaaaactgtgtttgaagcatctacgaagcggcca
cttgataaacggaaacggaataaaaacgatgatccttctgacattgagggttttcttggt
ccttggggttgttatgaagatgaaaaacgagtaatgaaaccaaatgaggctgaggctgaa
gagttagaggagtaccttgcaaagaaacagaaacggggtaaacagactgatgacaaacct
ttggaggaaaaaacagttttgcatatcaaagacagtgtggactatcagggacgatcattc
ctccatgtgccacaagacgttggtgtcaatctcaagtctgagacgccacctgaccgctgc
ttcctgcccaagtcacatgtccacacatggcaaggtcactctaagggtatctctgccatc
cggtggtttccgcactctgctcacctcctcttatcctgcagcatggattgtcgtgtcaag
ctttgggaagtgtacaaggagcgtcgctgcatcaggacgtactatggacatcggcaggct
gtgcgagacatcgccttcaacaatcccggcacacagtttctgtccgctgcgtatgaccgt
tacatcaagatgtgggacacagagacgggcgagtgtatatctcgattcaccagtcgcaaa
attccatattgtattaagtaccatccagacgatgacaaacagaacctctttgtggctggt
acttccgacaagaagattatatgttgggatatacgcagtggagagatcgtacaagaatat
gacagacatttgggtgctgtcaacactattacttttgtggacgagaataggagatttgtt
accacttctgacgacaaaagtctcagagtttgggaatgggatatccctgtggacatgaag
tatatagcagatcccagcatgcactccatgccagctgtaacaccgtcccctaaccacaag
tggctggcatgtcagagcatggacaacaagatagtcatcttttctgctctcaaccggttt
aaactgaaccgtaagaagacatttagcggtcacatggtcgccggctatgcctgttctctt
gacttttctccagatatgagctatataatctccggggatgcagatggcaaggcttatgtc
tgggattggaagactactaagctgttcagtaaatggcaggctcatgacaacgtctgtatc
gcagtcctctggcatccacacgagcccagtaaggtggccactgccgggtgggatggactc
atcaagtactgggactag
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