Homalodisca vitripennis (glassy-winged sharpshooter): 124362947
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Entry
124362947 CDS
T09217
Name
(RefSeq) ATP-dependent RNA helicase HAS1-like
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
hvi
Homalodisca vitripennis (glassy-winged sharpshooter)
Brite
KEGG Orthology (KO) [BR:
hvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hvi03041
]
124362947
03009 Ribosome biogenesis [BR:
hvi03009
]
124362947
Enzymes [BR:
hvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124362947
Spliceosome [BR:
hvi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
124362947
Ribosome biogenesis [BR:
hvi03009
]
Eukaryotic type
90S particles
Helicases
124362947
Pre-60S particles
124362947
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
AAA_30
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
124362947
NCBI-ProteinID:
XP_046673802
LinkDB
All DBs
Position
5:complement(142864513..142915113)
Genome browser
AA seq
654 aa
AA seq
DB search
MSIEKNSVMQKKRNKNKKKINANQDGPSNESPDKSNVQNGSVAGLSGPLIGQKRKLEGQK
MEVLNRKKKKKLRHVPETINEEEDEEENITSESSENTNIPEPVMKKKKQKKKTQLTETAE
NENSGKLNESSDSKENNTDVKEAQSNDVSIQLPGSNITLDLLLKDSSFSALEGRVSEETL
KAVEEMGFTKMTEIQAKAIPPLLEGRDVVASAKTGSGKTLAFLIPAIELVHKLQFMPRNG
VGCIIISPTRELSMQTFGVLKELMTHHHLTYGLIMGGASRSTEAQKLAKGINILVATPGR
LLDHLQNTPDFLYKNLQCLVIDEADRILQIGFEEDMKQIINLLPKKRQTMLFSATTTSKT
EALTRLALKKEPVYVGVDDKTEAATVDGLEQGYVICPSEKRFMLLFTFLKKNRKKKVMVF
FSSCLSVQFHHELLNFIDLHCMCIHGKQKQMKRTTTFFEFCNASEGILLCTDVAARGLDI
PDVDWIVQYDPPDDPKEYIHRVGRTARGANGKGHALLILRPEELGFLRYLKQARIPLNEF
EVASNKIADIQLQLEKLISKNYFLNKSAKEAFKSYVRAYDSHHLKLIFDVSTLDLAQVAK
SFGFTVPPAVDLQVTNSKNSRPRKRTGGGGFGFYKNINRESKPHQNIKYLQPKR
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgtctattgagaagaattctgtaatgcagaagaagagaaataaaaacaagaaaaagatt
aatgcaaatcaagatggaccaagtaatgagagccctgataaatcaaacgttcaaaacgga
tcagttgctggattgtctggcccattaataggacaaaagagaaaattggaaggacagaaa
atggaagtgttgaacaggaaaaagaaaaagaaacttagacatgttcccgaaaccattaat
gaagaggaagatgaggaagaaaacataacaagtgaatcctcagagaataccaacattcca
gagccagtcatgaaaaagaagaagcaaaagaagaaaacacagctaacagaaactgcagag
aatgaaaatagtggcaaattaaacgagagtagcgatagtaaagagaataatacagatgtc
aaagaagctcaaagcaatgacgtatccatccaattgcctggttccaatatcacattggat
ctgctgctgaaggactcctcgttctctgcgctggagggtcgggttagtgaggagactcta
aaggctgtagaggagatggggttcaccaagatgacagagatacaggccaaggccatccca
ccgctactagagggtcgagacgttgtggcttctgcaaagaccggctccggcaagaccctt
gccttcctgattcctgctatagaacttgtacacaagctacagttcatgcctagaaatgga
gttggatgtatcatcatctcccccaccagagaactgtccatgcagacgtttggcgtgttg
aaggagctgatgacccaccatcacctcacctatggccttataatgggtggtgccagcagg
tccaccgaggcacagaaactggctaaaggtatcaacatcttagtggccaccccaggacgc
ctgctggaccatcttcagaacactccagatttcctgtacaagaacctgcagtgcttggtg
attgacgaggctgacaggatcctgcagatcggctttgaggaagacatgaaacagatcatc
aaccttctacccaagaagcggcagactatgctgttcagtgctaccaccacttccaagaca
gaggccctgacaaggctagccctcaagaaggagcctgtgtacgtgggggtggacgacaaa
actgaggctgccacggtcgatggactggagcaaggctatgttatctgcccgtcggagaaa
aggtttatgctgctcttcacctttttgaagaagaaccgtaagaagaaggtgatggtcttc
ttcagctcatgtctctcagtgcagttccatcatgaactgctcaacttcatcgatctccat
tgcatgtgcattcacggtaaacaaaagcagatgaagcgtacaacaacgttctttgaattc
tgcaatgcatcggaaggcatcctgctttgtacagacgttgcagctcgagggttggacatc
cctgatgtggactggattgtgcagtatgatcctccagatgatcctaaggaatacattcac
cgagtggggaggacagccaggggggccaacggcaaaggccacgctctcctgatactgcga
ccagaagagctgggcttcctgcgctacttgaagcaggctcggatccctctcaatgagttt
gaggttgctagcaataagattgctgacatccaattacaattggagaagctgatatctaag
aactacttcctcaacaagtcagccaaggaggcgttcaagtcgtatgtgagggcttatgac
tctcaccacctgaagctaatcttcgatgtctctacactggatctcgctcaggtcgccaag
tccttcgggttcaccgtcccgcctgccgtcgacttgcaagtgactaacagcaagaactcg
aggcctcggaagcggacaggaggaggaggtttcggtttctacaagaatatcaaccgagag
agcaagccccatcagaacatcaagtacctgcagcctaagcgatga
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