Homalodisca vitripennis (glassy-winged sharpshooter): 124363037
Help
Entry
124363037 CDS
T09217
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36-like isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
hvi
Homalodisca vitripennis (glassy-winged sharpshooter)
Pathway
hvi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hvi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124363037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hvi03019
]
124363037
03012 Translation factors [BR:
hvi03012
]
124363037
Enzymes [BR:
hvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
124363037
Messenger RNA biogenesis [BR:
hvi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
124363037
Translation factors [BR:
hvi03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
124363037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_N
HA2_C
AAA_22
nSTAND3
NACHT
ATPase
AAA_14
NB-ARC
AAA_19
ATPase_2
Cas3-like_C_2
Sigma54_activat
ResIII
PhoH
ABC_tran
AAA_34
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
124363037
NCBI-ProteinID:
XP_046674056
LinkDB
All DBs
Position
5:152291329..152350337
Genome browser
AA seq
1136 aa
AA seq
DB search
MNSYIVITSIFVMITSLCDSYLSTSIAVAVQVVNLLLILCEPSGSWGKGRRGRRGRKGHF
GKHQDEGRGKGYIRGLMDTRNRIENLEYMDVASMEYYEFKRKLQRGRDREDDREKPPPGL
KGRALGMWYRDRSKREKRERKEDQREPCIELSLDRGKEMAIRQIVDSIGTPLTVPVQTHI
PERVIKRSRKNSRSRSRSRSKSPEEIRREIKKEPLEDEKPMTIGDKYKHLEESAFKRLFL
RSITGSMSKNVDNALQMKSKLSRERELDRELLEDLREKQSSEQYLEMQEFRRKLPAWEKR
EELLHMIENNQIIVISGETGCGKTTQVAQFILDNEIERGRGSMCHVVCTQPRRISAISVA
ERVADERNETVGDDGAVGYTIRLESHPPRKRGSILYCTTGVLLRMLEEDPALTAVSHLIL
DEIHERDTISDFAITILKDIIPKRPDLRLILMSATLNADHFSQYYNNCPTVNIPGFTFPV
QEFYLEDVLQMTRYIPKLKNNGRYQKFRGQNPKKWRMKPKEKEEMLLFRGMVHPYLRELT
SSKNYSAQVIDFLYNQDSEELSLELVTELIKYIDRTQGEGAILVFLPGWDKISTLNRMLT
QEGLSERAGYLVIPLHSMLSTVSQKSVFNRPPRGVRKIVIATNIAETSITIDDVVYVVDC
GRIKMKNFDLNFNVTTLKEEWVSLANARQRRGRAGRVREGVCYHLFTKAREQLLESYPVP
EMLRTRLEEVILQAKMLQLGSIKPFLSKVMNPPEPKAIDLSLKLLNDLNALDNDEHLTPL
GYHLAKLPMDPQTGKMILMGALFAVIDPVFSVAASLSFKDAFVVPIEEEKAFFRKKKELA
MGTKSDHLVLAEALTRWEAENQTNGGWRFTREYYLSPNTLSMLKDMKKQFAHHLHDMRFL
STSYVKDRESNRNSHNIGLIKAIICAGLYPNVAIVKNVKKTKKGDIRQKIFTPEDGPVSL
HIRSINSNEPFFEGRFLVYHLKMKTSKVFLHDTTMVFALALIFFGHNFELFKENGMVVIE
LSPKIRFTCATSTALLVKELRQRLDQLLEYKVAHPGVTDWDQSSDEGKLLRAIAELISHE
DEKLSMVDESDEDEDEDEDEDFPDYTEDRYSQGSSNSYRSDYGRASTSGVTPFPRF
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atgaacagttatatcgttatcactagcatatttgtaatgattacatcactatgtgattct
tatctctcgacatcaattgccgtcgctgtacaagtagtaaaccttcttctgatattatgt
gaaccatcaggaagttggggaaaaggtagaagaggcaggagaggaagaaagggtcatttt
ggaaaacaccaagatgaaggaagaggcaaaggatatatcagagggctgatggataccagg
aaccgaattgaaaacttggagtatatggatgtagcttcaatggagtattatgagttcaaa
aggaagctacaaagaggacgagaccgagaagatgacagggagaaacctcctccaggactc
aaggggagggctttaggtatgtggtatagagacagatcaaaaagggaaaagagggagaga
aaagaagaccaaagagagccgtgtatagagctgtcattggatcgtggtaaagagatggcg
atcaggcagatagtcgactctattggtactcctctaacggtgccagttcaaacgcacatc
cctgagagagtaattaagcggtcaagaaagaattctagatcaagatcacgttcaaggtca
aaatctcctgaagaaattcgtagagagataaaaaaagaaccattggaagatgagaagcca
atgacgattggtgacaagtataaacacctggaagagagtgctttcaagagactgtttctg
cgcagcatcactgggagcatgagtaaaaacgtggacaatgccctgcagatgaaatctaaa
ctgtcgagggaacgagagctggacagagagctgctggaagacctgagggagaagcagagc
agtgagcagtatctagagatgcaagagttccggagaaagttgccagcttgggagaaacga
gaggagctgctgcatatgatcgaaaacaaccagatcattgtcatcagtggtgaaactggt
tgtggtaagacaacgcaagtagctcagttcatccttgacaatgagatagagcgtgggcga
ggctccatgtgccatgtcgtctgtactcagcctcgacgtatatcagccatcagtgtggct
gagagggtggcggacgagcggaacgaaacagtgggcgatgatggggctgttggctacacc
atccggcttgagtcacatccacctcgtaaaagaggatccatattatactgcactacagga
gttctgctgcggatgctggaggaagatccagctctaaccgctgtatcccatctaatactg
gatgaaatccatgagagagacaccatcagtgactttgccataaccatattgaaagacatc
ataccaaagaggccagatctgaggctgatcttgatgagcgcgacactgaatgcggatcat
ttctctcagtactataacaactgtccgacagtaaatattcctgggttcactttcccagta
caggagttctacctagaggatgttctgcagatgaccaggtatattccaaaactgaagaat
aatggtagatatcagaagtttcgtggtcagaatccaaagaaatggagaatgaaacccaaa
gaaaaagaggaaatgcttctatttagaggcatggttcatccatacttgagagaattgaca
tccagcaagaactattccgcacaggtgattgatttcttgtacaaccaggattctgaggag
ttgagtttagaactggtgacagaactgataaagtatatagacaggacacaaggtgaagga
gctatacttgttttcctgcctggctgggataagatatcaactctcaataggatgttgacc
caggagggtttgtctgagcgagctggttacttggtgatacctctgcactccatgttgtct
acagtgtcccagaagtctgtgttcaaccgcccaccaagaggagtgagaaagatagtgata
gccacgaacatagcggagacatccatcaccatagacgacgtggtgtatgtggtcgactgt
ggaagaatcaagatgaagaactttgacttgaacttcaatgtgacaacactgaaagaggag
tgggtcagcctggctaacgccagacagaggagagggagagctggcagagtgcgtgaaggt
gtgtgctaccacctgttcaccaaagccagggagcagctgttggagtcatacccagtacct
gagatgttgaggaccaggctagaggaagtgatattgcaagccaagatgttacaattaggc
agcatcaagcctttcctctccaaagtaatgaatcctcccgagcctaaagccatagaccta
tctctaaagcttctgaacgacttgaacgccctggacaacgatgaacatctgacacccctc
ggctaccacctggccaaactgcccatggacccccagacaggcaagatgatcctgatggga
gctctgtttgctgtgatagaccctgtgttctctgtggctgctagtctcagcttcaaagac
gcttttgtagttcctatcgaagaagagaaggcattcttcagaaaaaagaaggaattggcc
atgggcaccaagagtgatcacttggtgttagccgaggccctcacacgctgggaggcagag
aaccagaccaacggtggctggaggttcaccagagaatactacctcagtcctaacaccctc
tccatgctcaaagatatgaagaagcagtttgcccaccacttacatgacatgcgattcctg
tccacaagttacgtcaaggacagagaaagcaaccgaaactcccataacattggactcatc
aaagccattatctgtgctggtctctacccgaatgttgccatcgtcaaaaatgtcaagaaa
acaaagaaaggtgatatacggcagaagatatttacaccagaagatggtcctgtaagcttg
cacatacgctcaataaacagcaacgagccgttcttcgagggacggttcctggtgtaccat
ctcaaaatgaagacctccaaggtgttcctgcacgataccaccatggtgttcgccttggct
ctcatcttctttgggcacaactttgagctgttcaaggagaatgggatggtggtcatagag
ctgtctcccaaaatacgcttcacctgtgcaacctccactgctctcttggtgaaggagttg
aggcagagattagaccagctgctggagtacaaggtagcacacccgggcgtaacggactgg
gaccagagctctgacgaggggaagctgctccgggcaatagctgaactgatatctcacgag
gatgagaagctaagtatggtagatgagagtgatgaggacgaggacgaggatgaggatgaa
gatttcccagactacacagaggaccgatactctcagggttcatccaacagttaccgcagt
gactacggtcgtgccagtacctctggggtcaccccattccctcggttttga
DBGET
integrated database retrieval system
