Homalodisca vitripennis (glassy-winged sharpshooter): 124363087
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Entry
124363087 CDS
T09217
Name
(RefSeq) endoribonuclease ZC3H12A-like isoform X1
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
hvi
Homalodisca vitripennis (glassy-winged sharpshooter)
Brite
KEGG Orthology (KO) [BR:
hvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hvi03019
]
124363087
Messenger RNA biogenesis [BR:
hvi03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
124363087
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_4
zf-CCCH_2
zf-CCCH
RuvA_C
KH_N4BP1_1st
Motif
Other DBs
NCBI-GeneID:
124363087
NCBI-ProteinID:
XP_046674144
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Position
5:163096629..163164476
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AA seq
665 aa
AA seq
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MDELNKSQLLIRVKRKKVRLVEEKLDEIRNVFSVRLNKQSKETSNPRFVWFIIEQDRRLE
DITEELLVAKVQNFVDTLCEGETEGDDGEGEDSSYDSDQDNELPRHQDVSRTASDTLGAE
FAEYVSLPPQGYLAKVEFGLKLGYTERHVQAALQKLGPNPGQNDLLAELIKLGAQTPPRL
GSGSSVEGVDEADFELLTPADDAYRLRPVVIDGSNVAMSHGNKVVFSCRGIKICVDWFKA
RGHKEITVFVPLWRKESSRPDNPITDQEILNELEREKILVFTPSRHCNGKRIQCYDDRYI
LKLAAEMDGIVVSNDNYRDLIPENPEYRKVIEERLLMYSFVNDRFMPPDDPLGRSGPTLD
KFLRIQPRRGDPPPPCPYGKKCTYGNKCKFHHPERGPLPHKSVTERLAENAQRHLQARGR
DSSPGNQLKGKSLSLPLQSSEGNMKTPLKKTPLSRTKSTISPDVASSLPGKSQSVDNIDG
SCFRSPPPSYATPPPPLWGPKPWPDESENLHRKLQRQLTLNPSCDPRLYHIQRQHQAVTR
VMSCEPPAYSPPSHQHVTRIASAPPAHPPAQMCSRPLSSASDPQLNLSTPPPALPSSWSI
PPPTTPHPSSFHPPPKVDEVRQRLLYHLASIFPEEQVQTALRYYPNETNPQKICAAILSM
FPPKP
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggatgaattgaataaatcacaattacttattcgtgttaaacgtaaaaaggtacgttta
gtcgaagaaaaattagatgaaatacggaatgttttttcagtgcgacttaacaaacaatca
aaagagacttctaacccccgtttcgtatggtttattatagaacaagatagaagactagaa
gatataactgaagagcttcttgtagccaaagtacagaatttcgtagacaccttgtgtgag
ggagagacggagggcgatgatggcgagggggaggactcgagttacgactctgaccaggac
aatgagctcccgcgacaccaggacgtgtctcgcacagcatcggacactctgggagccgag
tttgccgagtacgtgtcgctcccaccacagggatacttggccaaagtagagttcgggctc
aaactcggctacaccgaacgacatgtccaagctgccctacagaagctgggacccaatcct
ggccagaacgacttacttgccgagctgataaagctgggagcccagacacctcctcggctg
ggctcaggatccagtgtggagggtgtagacgaggcagactttgagctgctcacccctgca
gatgacgcctacagactcaggcctgttgttattgatggaagcaatgtcgccatgagccat
ggaaacaaggttgtattttcatgccgaggaatcaaaatctgtgttgattggtttaaagca
agaggacacaaggaaatcactgtgtttgttccattgtggagaaaggagtcatctcgtcct
gataatccaatcacagatcaagagattctaaacgaattggagcgtgaaaagatcttagtt
ttcacaccttctcgccattgtaatgggaaaaggattcagtgctatgacgatcgttacatc
ctgaaattagcagcggaaatggatgggattgtggtgtctaacgataactaccgagatctg
ataccagaaaacccagagtatcgaaaagtcatcgaggaaaggctgctcatgtattctttt
gtcaatgatagattcatgcctcccgatgatccgttggggaggtctggccctactcttgac
aaattcttaaggatacagcctcgcagaggagaccctcctccaccgtgtccatatggcaag
aagtgtacctatggtaataagtgcaagttccaccatcctgagcgggggcctttgccccac
aagtctgtaaccgagcgactggcagagaatgcccagagacacttgcaagctcgtggcaga
gattctagtccaggaaatcagttgaaaggaaaatcgcttagtcttccattgcagtcaagt
gaagggaatatgaaaacacctttgaagaaaacaccactttcaagaacaaaatcaaccatt
tcaccggatgtagcaagcagtttaccaggaaagagccaaagcgtagacaacattgatggc
tcttgtttccgatctcctcctcccagctatgctacaccacctccacccctctggggaccc
aaaccttggcctgacgaaagcgagaatctccatcgaaaacttcagagacagctcactctg
aaccccagctgtgatccgaggttgtatcacatccagcgacaacatcaggctgtgactcgt
gtcatgagttgcgaaccacccgcgtactctcctccatctcaccagcacgtgactcgcatt
gcttctgcaccccctgcccatcccccggctcagatgtgttcccgaccattgtcctccgct
tcggacccccagctgaacctgtccactcctccccctgcactcccctcttcatggtcgatt
cctccccccactacgcctcacccgtcgtctttccatcctcccccgaaggtggacgaggtt
agacaaagacttctctatcatttggcatccatttttcctgaagaacaagtgcagacggct
ctacgatattatcctaacgagaccaaccctcaaaagatatgtgctgcaattttgtccatg
tttcctccaaaaccgtga
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