Homalodisca vitripennis (glassy-winged sharpshooter): 124363163
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Entry
124363163 CDS
T09217
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
hvi
Homalodisca vitripennis (glassy-winged sharpshooter)
Pathway
hvi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hvi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124363163
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hvi03021
]
124363163
03036 Chromosome and associated proteins [BR:
hvi03036
]
124363163
Transcription machinery [BR:
hvi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
124363163
Coactivators
SAGA/TFTC/STAGA complex
124363163
Chromosome and associated proteins [BR:
hvi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
124363163
STAGA complex
124363163
TFTC complex
124363163
SAGA complex
124363163
SLIK complex
124363163
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
TFIID_NTD2
WDR55
Beta-prop_EML
Beta-prop_SCAP
NBCH_WD40
ANAPC4_WD40
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_Vps41
Beta-prop_Nup120_160
Beta-prop_HPS5
Beta-prop_DCAF4
Beta-prop_DCAF12
Beta-prop_WDR35_TULP_N
WDR54
WD40_RFWD3
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
124363163
NCBI-ProteinID:
XP_046674262
LinkDB
All DBs
Position
5:complement(171384999..171407667)
Genome browser
AA seq
591 aa
AA seq
DB search
MNCTVVNVCDNDFKKRSGSDMVKSAVNSYLRRRHYMETDHFRKSDLVLSQTCKQMTVAAT
VDKDVSRLNSIIFSTISNDIALAEQQFTKLKSWILELPEGKCRHELHAMLFPLLCHLYLE
ILRGGLDRQATSKFLKRHQELFLGHENHRDIIEELSLVFTTQDIDSKPLIKAFRSCKYEL
KISSSTMAALQKYLATQSHVILLQVLQTWFDIEVLSSDSVFESEDYVLEDYVDETADYLE
SLYQQTHDDKEMRHLQEMIRQVRASPTPPPPLLLYSLNNSESVCCAKVSRSGKLMASGYS
SSQLKLWSLSESKIGPAAGHYSTVNLATNTPLQTLTIPEQRYSNLRGHCGPVTGIEFLYD
AEVLLSVSHDTTMRAWRMADYSPAAIYRGHNYPVWSVAVSSLGVYIATGSQDCTARLWNL
DRTYPLRIFAGHCQDVNCVQFHPNSSYLATGSADRSIRLWSVTDGSLVRVYGNSGSVLAL
AFSPNGQHLASGGDDRRVRVWDLATGGVLAELKGHSAPITALDWSKDSSTLSSASLDGTV
FVWNSALHFKPPTSETTENPAKYTTNCSTMLSLQCLPRGNLVAVGTQGPVS
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgaattgtactgtagttaatgtttgtgataatgatttcaaaaaacgctcaggaagtgat
atggtaaaaagtgcagtcaattcatacttgcggcgcagacattatatggaaacagatcac
ttcaggaaatcagatttggttttaagtcaaacatgtaagcagatgacagttgcagcaaca
gtggacaaagatgtttctagactaaactcaataatatttagcacaataagtaacgacatt
gccttagctgaacaacagtttaccaaattaaagtcatggatcttggaacttccagaagga
aagtgtcgccacgagttgcatgccatgttgttccccttactctgtcacttgtacctggaa
atattacgcggaggtttagacagacaggcaacgtccaagtttctcaaacgtcaccaagag
ttatttttgggtcatgaaaatcacagagacatcattgaagaattgtccttggtattcacc
acccaggacattgacagcaaaccacttatcaaagcttttaggtcatgtaaatacgaatta
aagatcagttcgtcaacaatggctgcactgcaaaagtatctagcaactcaaagtcatgtt
atattgcttcaggttcttcaaacgtggtttgatattgaagtgttatccagtgacagtgtt
tttgagagcgaagattatgtgctggaggattatgtagacgaaacagcagactacctagag
tccctgtatcaacaaacacatgacgataaggaaatgcgtcatttacaagagatgatcaga
caggtccgagcaagtcccactccacctccgcctctgttgctgtactccttgaataattct
gaaagcgtgtgctgtgcgaaggtgtcgcgctcaggcaagctgatggcgtctgggtactcg
tcatcacaactcaagctctggtctctgtcagagtccaagatcggtccagcggctggccac
tactccactgtcaatctggccaccaacacacctcttcagaccctcacaataccagaacag
agatacagcaatcttcgaggacactgtggacctgtcacagggattgagttcttgtacgat
gctgaagtcctgctgtctgtttctcacgacaccaccatgagagcctggaggatggcggat
tattcaccggctgctatttacagaggtcacaactaccctgtctggtcagtggctgtcagc
tcgctgggggtctacatagcaacaggttcacaagactgtacagctcgactgtggaacctc
gatcgtacctatcccctgcgcatctttgctggtcactgccaggatgtcaattgcgtacaa
ttccatcccaacagcagttacctggcaactggctcagcggaccggtccatccgcctgtgg
tccgtcacagatggcagcctggtgcgagtttacggcaactccggcagcgtgctcgccctt
gccttcagtcctaatggccaacatcttgcttctggtggagacgaccgcagagtgagggtg
tgggatctggccacaggaggagtgctggcagagttgaagggtcactctgcaccaatcaca
gccctcgactggagtaaagacagtagcactctgtcctcagcatctctggacggcaccgtg
ttcgtgtggaactctgcacttcacttcaagccccctaccagtgaaactacggagaaccca
gccaagtatactacaaactgttcgacgatgctcagtctgcaatgtctacctcgagggaac
ttggtggcagttgggacccaggggcctgtctcataa
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