KEGG   Homalodisca vitripennis (glassy-winged sharpshooter): 124363163
Entry
124363163         CDS       T09217                                 
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
hvi  Homalodisca vitripennis (glassy-winged sharpshooter)
Pathway
hvi03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:hvi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    124363163
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hvi03021]
    124363163
   03036 Chromosome and associated proteins [BR:hvi03036]
    124363163
Transcription machinery [BR:hvi03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     124363163
   Coactivators
    SAGA/TFTC/STAGA complex
     124363163
Chromosome and associated proteins [BR:hvi03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     124363163
    STAGA complex
     124363163
    TFTC complex
     124363163
    SAGA complex
     124363163
    SLIK complex
     124363163
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR3_2nd WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WD40_Gbeta EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd TFIID_NTD2 WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_WDR36-Utp21_1st Beta-prop_SCAP NBCH_WD40 ANAPC4_WD40 Beta-prop_Aladin WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_WDR75_1st Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_TEP1_C Beta-prop_RIG_2nd Beta-prop_VPS8 Beta-prop_WDR41 Beta-prop_WDR19_1st Beta-prop_SPT8 Beta-prop_Vps41 Beta-prop_Nup120_160 Beta-prop_HPS5 Beta-prop_DCAF4 Beta-prop_DCAF12 Beta-prop_ACSF4 Tricorn_2nd Beta-prop_WDR35_TULP_N WDR54 Beta-prop_RIG_1st
Other DBs
NCBI-GeneID: 124363163
NCBI-ProteinID: XP_046674262
LinkDB
Position
5:complement(171384999..171407667)
AA seq 591 aa
MNCTVVNVCDNDFKKRSGSDMVKSAVNSYLRRRHYMETDHFRKSDLVLSQTCKQMTVAAT
VDKDVSRLNSIIFSTISNDIALAEQQFTKLKSWILELPEGKCRHELHAMLFPLLCHLYLE
ILRGGLDRQATSKFLKRHQELFLGHENHRDIIEELSLVFTTQDIDSKPLIKAFRSCKYEL
KISSSTMAALQKYLATQSHVILLQVLQTWFDIEVLSSDSVFESEDYVLEDYVDETADYLE
SLYQQTHDDKEMRHLQEMIRQVRASPTPPPPLLLYSLNNSESVCCAKVSRSGKLMASGYS
SSQLKLWSLSESKIGPAAGHYSTVNLATNTPLQTLTIPEQRYSNLRGHCGPVTGIEFLYD
AEVLLSVSHDTTMRAWRMADYSPAAIYRGHNYPVWSVAVSSLGVYIATGSQDCTARLWNL
DRTYPLRIFAGHCQDVNCVQFHPNSSYLATGSADRSIRLWSVTDGSLVRVYGNSGSVLAL
AFSPNGQHLASGGDDRRVRVWDLATGGVLAELKGHSAPITALDWSKDSSTLSSASLDGTV
FVWNSALHFKPPTSETTENPAKYTTNCSTMLSLQCLPRGNLVAVGTQGPVS
NT seq 1776 nt   +upstreamnt  +downstreamnt
atgaattgtactgtagttaatgtttgtgataatgatttcaaaaaacgctcaggaagtgat
atggtaaaaagtgcagtcaattcatacttgcggcgcagacattatatggaaacagatcac
ttcaggaaatcagatttggttttaagtcaaacatgtaagcagatgacagttgcagcaaca
gtggacaaagatgtttctagactaaactcaataatatttagcacaataagtaacgacatt
gccttagctgaacaacagtttaccaaattaaagtcatggatcttggaacttccagaagga
aagtgtcgccacgagttgcatgccatgttgttccccttactctgtcacttgtacctggaa
atattacgcggaggtttagacagacaggcaacgtccaagtttctcaaacgtcaccaagag
ttatttttgggtcatgaaaatcacagagacatcattgaagaattgtccttggtattcacc
acccaggacattgacagcaaaccacttatcaaagcttttaggtcatgtaaatacgaatta
aagatcagttcgtcaacaatggctgcactgcaaaagtatctagcaactcaaagtcatgtt
atattgcttcaggttcttcaaacgtggtttgatattgaagtgttatccagtgacagtgtt
tttgagagcgaagattatgtgctggaggattatgtagacgaaacagcagactacctagag
tccctgtatcaacaaacacatgacgataaggaaatgcgtcatttacaagagatgatcaga
caggtccgagcaagtcccactccacctccgcctctgttgctgtactccttgaataattct
gaaagcgtgtgctgtgcgaaggtgtcgcgctcaggcaagctgatggcgtctgggtactcg
tcatcacaactcaagctctggtctctgtcagagtccaagatcggtccagcggctggccac
tactccactgtcaatctggccaccaacacacctcttcagaccctcacaataccagaacag
agatacagcaatcttcgaggacactgtggacctgtcacagggattgagttcttgtacgat
gctgaagtcctgctgtctgtttctcacgacaccaccatgagagcctggaggatggcggat
tattcaccggctgctatttacagaggtcacaactaccctgtctggtcagtggctgtcagc
tcgctgggggtctacatagcaacaggttcacaagactgtacagctcgactgtggaacctc
gatcgtacctatcccctgcgcatctttgctggtcactgccaggatgtcaattgcgtacaa
ttccatcccaacagcagttacctggcaactggctcagcggaccggtccatccgcctgtgg
tccgtcacagatggcagcctggtgcgagtttacggcaactccggcagcgtgctcgccctt
gccttcagtcctaatggccaacatcttgcttctggtggagacgaccgcagagtgagggtg
tgggatctggccacaggaggagtgctggcagagttgaagggtcactctgcaccaatcaca
gccctcgactggagtaaagacagtagcactctgtcctcagcatctctggacggcaccgtg
ttcgtgtggaactctgcacttcacttcaagccccctaccagtgaaactacggagaaccca
gccaagtatactacaaactgttcgacgatgctcagtctgcaatgtctacctcgagggaac
ttggtggcagttgggacccaggggcctgtctcataa

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