Homalodisca vitripennis (glassy-winged sharpshooter): 124363285
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Entry
124363285 CDS
T09217
Name
(RefSeq) nucleoporin NDC1
KO
K14315
nucleoporin NDC1
Organism
hvi
Homalodisca vitripennis (glassy-winged sharpshooter)
Pathway
hvi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hvi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124363285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hvi03019
]
124363285
Messenger RNA biogenesis [BR:
hvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124363285
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
124363285
NCBI-ProteinID:
XP_046674459
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Position
5:182225216..182231471
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AA seq
594 aa
AA seq
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MLNTMKQIQETAVISSMRPENSKNPETHVWRMRMAVLWSLAMQFILLFVFILFTNLDIFH
PFTWIANCFRTFISLSIWLKLLTLVVVIYIQGEVCKKDYVTGPIYHSTRFQKICKVFSVR
NLLLLLLHMVIGATIFWIYITISGKSYESLTKQCYESTMNKNSETCLVERKFFLMLGGIW
LGMYYFANDYMFGSRALTFPLIQQYKFYRMKAALKQNIQKSVKESILPTVTFLILYYLYG
GYVRNKFIELTLYRLDSEPIDSITGLMNINLVLSLWLFSSIFIVALQMMELLFNVYLTEH
CSFPITLATSPSQNCMSLIDALKKSNIPIVHHLGYLDLFILSAKCQQKREEIFTLSHPGG
HPHSWNGIFLECTNLVKQFTSDLNQTLKEATSTEKEVAKPLAEEVTNFHFHSHNMRKLAS
PMGNTDIVNVKPKEYQSGVEIAFLHVQNWLITKLQQLYKKPYVAYFFLESPTSRINYLLC
QCQPVIWAVESLAFLAAASLTEDRYGIVQQDLSEIITLIITLKQVLDKLFKQNLIVKKSF
PNDPLDVQMKYLLRSSVKRSLYRISVNFGPYIRDLKLPVDVEVQMNHFIAFKEV
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgctaaataccatgaaacagattcaagaaactgcagttattagttcaatgaggccggag
aatagtaagaatcctgaaactcatgtttggagaatgagaatggcagtattatggagccta
gctatgcaattcattttactgtttgtttttattcttttcacgaatttagatatattccat
ccttttacttggattgcaaattgtttccgaactttcatttcattaagtatttggttgaaa
ctcctaactctagtcgttgttatttacattcaaggggaggtatgcaaaaaggactacgta
actggcccaatttaccactcaacacgattccaaaagatatgtaaagtgttttctgttaga
aatttgttgttgttgttattacacatggttattggtgctactatattttggatctatatt
accatatcaggaaaatcttacgaatcccttacaaaacagtgttatgaaagtacgatgaat
aaaaactctgaaacttgcctggtagagagaaaattcttcttgatgttgggaggaatttgg
ctaggaatgtattactttgcaaatgactatatgtttggatcaagagctttaacatttcca
ttaattcaacagtataaattctacagaatgaaggctgcattgaaacaaaacattcaaaag
tctgtgaaagagtcaattttacctactgttacatttctaattttgtactatttatatgga
ggttatgttcgaaataagttcattgaattgactttgtataggctggacagtgaacctatt
gattcaattacgggcctaatgaatattaatcttgtactttcactgtggctgttttcttca
attttcatcgtagcactacaaatgatggagttgcttttcaatgtttacttaactgaacac
tgtagctttcctattaccttggccacgtcaccttcacaaaactgtatgagcttgatagat
gctttgaaaaaatcaaacatccccatagtgcaccatcttggttatctggatttgtttata
ctatcagcaaaatgccagcagaaaagagaagaaatttttactttaagtcacccaggtggt
catccacattcgtggaatggtattttcctggagtgtacaaatttagtaaaacagtttaca
agtgatcttaaccaaacattgaaggaagcaacaagtactgaaaaagaagtagccaaacca
ctcgctgaagaagtcacaaattttcattttcattcccataatatgaggaaacttgcttct
cccatggggaacacggacattgtcaatgtaaagccaaaagaatatcaaagtggtgttgaa
atcgcattccttcatgtccaaaattggttgattaccaagttgcagcaactgtacaagaaa
ccttatgtagcctatttctttttggaatcgccaacgtctcgtataaactacctgttgtgt
cagtgccaaccagtgatctgggcagtggagagtttagcatttcttgctgctgcgtctctg
actgaagaccggtatggaattgtacagcaagacttatcagaaataattaccttaattatt
accctaaaacaagttctcgacaaactttttaaacaaaatcttattgttaagaagtcattt
ccaaatgatccactagatgttcaaatgaaatacctcttaaggtcgtctgtaaagagaagt
ttatataggatttctgtcaattttggtccctatatcagagaccttaaattaccagttgat
gtcgaagttcaaatgaaccatttcatagcattcaaggaggtatga
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