Homalodisca vitripennis (glassy-winged sharpshooter): 124363301
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Entry
124363301 CDS
T09217
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
hvi
Homalodisca vitripennis (glassy-winged sharpshooter)
Pathway
hvi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hvi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124363301
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hvi03041
]
124363301
Spliceosome [BR:
hvi03041
]
Complex B
Other components
Prp19-related factors
124363301
Complex C
124363301
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
zf_CCCH_4
Torus
RRM_YTH1
zf-CCCH_2
RRM_occluded
zf-CCCH_4
zf-CCCH
Nup35_RRM_2
SpdB
RRM_3
zf-CCCH_10
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
124363301
NCBI-ProteinID:
XP_046674485
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All DBs
Position
5:183004501..183013629
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AA seq
451 aa
AA seq
DB search
MATSKSANTYNRQNWEDAEFPILCQTCLGDNPYIRMTKEKYGKECKICSRPFTVFRWCPG
ARMRFKKTEVCQTCSRLKNVCQTCLLDLEYGLPIQVRDTALRIKDDLPRSEVNKEYYIQN
MDNELGKVDSTTPAGTIGKTQAASDMLMKLARTTPYYKRNRPHICSFWVKGECRRGEECP
YRHEKPTDPDDPLADQNIKDRYYGVNDPVAEKLMRRASAMPKLEVPEDKSITTLYIGNLG
ERIGEKELRDHFYQYGEIRSITHVARQQCAFIQFTQRSAAELAAERTFNKLILGGRRMNI
KWGRSQGRQNSSSSAADNAEILEPVPGLPGALPPPPTDLQDNFFNLAQSEIIPHPPPPPF
LPPPMLPLPPMPRPPTGLRPAGPPPPFFFPPHMRLPLRAPIFAPQPPLCPPGTAPPLPPE
PTPLAPPGTIPIHYPSQDPSRLGAPQKSSVE
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggctacctcaaagtcagctaacacctacaacagacagaattgggaagatgcagaattc
ccaattctgtgccagacatgtcttggagataatccgtacatcagaatgaccaaagaaaaa
tatggcaaggaatgcaagatttgttcaagaccttttacagtttttcgatggtgtccaggt
gcaaggatgcgctttaaaaagaccgaagtctgtcagacatgttctcgattaaaaaatgtt
tgccagacttgtcttttggatctggagtatggactgcccatacaagtgcgtgacacagcg
ctgcgcatcaaggatgatctcccgaggtctgaggtcaacaaggagtattacatacaaaac
atggataatgagctgggcaaggttgatagtacaaccccggccggcactattggaaagacg
caggctgccagtgacatgctgatgaagttggctcggaccactccgtactacaagcgtaac
aggcctcacatctgttccttctgggtaaagggcgagtgtcggagaggagaagagtgtcct
tatcgtcacgagaagcctacagatcctgacgatcccctggctgaccagaacatcaaggac
agatattacggagtaaatgatccagtggctgaaaaacttatgaggagagcttctgctatg
cctaagctagaggttccggaagacaaaagtatcacaaccctttatatcggtaacctagga
gaaagaattggagaaaaagaattaagggatcacttttatcaatacggagagataaggagt
ataactcacgttgcccgccagcaatgtgccttcattcagttcacacagcggtcggcagct
gagttagctgcagagagaacttttaacaaactgattctgggcggacgtcgcatgaacatc
aagtggggacgctcacaagggcgacagaactcttcgtcttctgctgcggacaatgcagag
atcctggaaccagttcctgggctgccgggtgccttaccccctccaccgaccgatttacaa
gacaattttttcaatttggcccaatcggaaatcattcctcaccctccccctccacctttt
ctcccccctccgatgcttccccttcctccgatgccccgtcctcccactgggttacgtcct
gcagggccaccccctcctttcttcttccctcctcatatgcgtttaccgcttcgggctcct
atatttgccccacagccgccgctctgcccgcctgggacggcaccgccccttccgcctgag
ccgactcctctggcccctcctggcacgatacctatacactatccatctcaggatccatcc
cgcctgggagcgcctcagaagagttccgttgaatag
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