Homalodisca vitripennis (glassy-winged sharpshooter): 124363739
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Entry
124363739 CDS
T09217
Name
(RefSeq) low-density lipoprotein receptor-related protein 6
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
hvi
Homalodisca vitripennis (glassy-winged sharpshooter)
Pathway
hvi04150
mTOR signaling pathway
hvi04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
hvi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
124363739
04150 mTOR signaling pathway
124363739
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hvi04131
]
124363739
Membrane trafficking [BR:
hvi04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
124363739
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
EGF_LRP2
SGL
Vgb_lyase
DUF5050
cEGF
DUF6923
PEP5_VPS11_N
PRKCSH-like
Motif
Other DBs
NCBI-GeneID:
124363739
NCBI-ProteinID:
XP_046674956
LinkDB
All DBs
Position
5:173924711..173957697
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AA seq
1583 aa
AA seq
DB search
MAGAVGPCAIQTLNSRPEVAPSPPHIASSVIDTLRGDGDSAFPKLLFVTNKDIRIANVSR
PSKVVTIVKDIEEGAAVDYYYAGSRICWTDRGLEMIQCVTYNGSEAYNRVEVVTSGLITP
DGLACDWLTKKLYWTDGETNRVEVATLDGKLRKVLFWDDIDQPRAIAVVPMDSLVFWTDW
GEVPKIERAGMNGDPTTRKVIVNSNIFWPNGLTVDYDQRRIYWLDGRLHFIEVMDYDGRN
RKHLAEKGVIYPFALALFQDKLYWTDWKTWSVHVFDRTSGGSPKEMLHSNYVPMDIRVWD
PRRQPYKWTPCEHNNGGCSHLCLLAPYAPGFTCACPTGIKLINNFTCANGAQELLLIVQR
TDISRISLDSPDHTNLVLPLTGVKHSIAIDYDPIDGYIYWTDDDVQAIRRARMNGSGQED
LITTEVEHPDGIAVDWIARNMYWTDTGTDRIEVARLDGRARKVLINEDLVEPRAVAVAPE
HGWLFWSDWNEKRPKIERAALDGSERVVLVREGLGWPNGIALDYGTSKLYWCDAKTDKIE
VINMDGSDRREVISDNLLHIFGLTLLGDYLYWTDWQRRSVDRADKVTGNRRELIMDQLPN
LMGIKAVGVGQGGGWNPCKEHNGGCSHLCLNRPGNHSVCACQIGYELATDGHTCVVPEAF
LLFARRENIGRISIENADNDAIIPVTGVKDASALDFDMTDSRIYWTDVKVKAITRAFING
SQVERIVEFGLDSPEGLAVDWVAHNIYWADTGSKRIEVARLDGTSRKVLLWKSIEEPRSI
ALDPSECYMYWSDWGGQGSVERATMDGTSHLVILAKVGRANGLTVDYTERRLYWSQLHGT
PAIEVADLDGKHRSTVISKDIGRPFALTQYQDYIYWADWNSGSIERVEKHYGANRTLLHR
QLDHVTDLQVFHTSRQLGWNLCAGDNGGCSHLCLARPGDSSRHCACPTHYTLHNKTCQAP
TAFLLYSQRNSINRLIWETDDCPDVPLPIQNLKNVRAIEFDPVKQFLYWIDGRTQSIRRS
QDTGSSVGIVVAGGGAVHQHPYDLAIDPYTRLLYWSCAVGDTINVTRLSNGSALGVVVRG
ANGEKPRNIALHPDKGFLFWTDVGVKSRVLRSRLDGQKRLVIAEEKDQVTALAVDKDHDL
IFWSTKQRINVADLTGKNMRTVVSSQLSQVSGLAVLGNYLYWMDKDQQLIERVDKNTGLS
REVIMSKVAHLTDLVAITNIKNANHPCGPLTNHGGCTHLCLPLPHGSTECSCPQGLILHE
DRATCSALPACGVDHFTCGAPSADCIPSAWRCDGQSDCPDSSDEMGCPECTQHQFRCHSG
QCIDVSWLCDGNSQCPDGSDEISCCTTSSPSLFPCKLGGPCVSITEVCDGWSNCPDGSDE
SPLACQTHPPPRFVSNPPQGHVTLYILISISCLASFAAALYRCKKRFAPASPGLPCEDSA
ADPLSPKPLRVVPKTGPTIPKPAPAVRMTAINGTSSSSYDRSHVTGASSSASLLCYPLNP
PPSPATTAQREEYCCPRYRPPPPTPCSTDVCDESDSNYRCDSDPFPPPPTPRSHSSGPPS
PSSSTYFHPLPPPPSPNSRCPNC
NT seq
4752 nt
NT seq
+upstream
nt +downstream
nt
atggctggcgctgtcggaccctgtgctatacaaaccctgaatagtcgaccggaagtcgcc
ccctcaccccctcacatcgcatcgtccgtcatcgatactcttcgtggagacggagattca
gctttcccaaaactgctgttcgtcaccaataaggatatcaggattgccaatgtttctcga
ccatcaaaagttgttactattgttaaggatattgaggaaggggccgcagtggactactat
tatgccggatctcggatctgctggacagatcggggactggagatgatccagtgtgttacg
tacaatggctcagaagcgtacaatagggtcgaggtggtaacgtctggactgataactcct
gatggtctggcgtgcgactggctcaccaagaaattgtactggacggatggggaaaccaac
agggtggaggtggcaacactggacggcaaactacgcaaggtgctgttctgggacgacatc
gaccaaccacgggccattgctgtcgtccccatggacagcctagtgttctggactgactgg
ggagaggtgccaaagatcgagagggcagggatgaacggagatcctaccacaaggaaagtc
attgtcaacagcaacatattctggcccaacggactgacagttgattacgaccaaaggcgg
atctattggctcgacggaaggctacatttcattgaggtaatggattacgatggaagaaac
aggaagcatttagctgagaaaggcgtgatctatccttttgctttagcactgttccaagat
aagctgtactggactgattggaaaacttggtcagtgcatgtgtttgaccgcaccagcgga
ggctcacccaaggagatgctgcacagcaactatgtgccgatggacatcagagtgtgggac
ccacggagacaaccctacaagtggacgccctgcgagcacaacaacggcggctgctctcat
ctgtgcttgctagctccgtacgctcctggcttcacatgtgcctgccccaccggcatcaaa
ctcatcaacaactttacttgtgcaaacggagcccaagaactgctgttgatagtgcagaga
actgacatcagcaggatatccctggactctccagaccacaccaaccttgtgttgccgctc
actggagtcaagcattccatagccatagactacgatcctatcgatggctacatctactgg
accgatgacgatgttcaggcgatcaggagagcgcggatgaatggtagtggacaagaggat
ttgataacaacagaggtggaacatccagacgggatagcagtagactggatagcccgcaac
atgtactggacagacactggcactgacaggatagaggtggccaggctagatggacgtgcc
agaaaggtgctgatcaacgaggacctggtggagcctagagctgtggcagtagcaccggaa
cacggctggctgttttggtccgactggaatgagaagcggcccaagatcgagcgagcggct
ctggatggctcggagagagttgtgctggtccgagaagggttgggttggcccaacggtatt
gccctggactacggcactagcaagctctactggtgcgatgctaagacagacaaaattgag
gttatcaacatggacgggagtgacagacgcgaggtgatcagtgacaacttgctgcacatc
ttcggcctgacgctgctgggggactatctgtactggacggactggcaacggcgcagtgtg
gaccgcgcagacaaagtgacgggcaaccggcgcgagctcatcatggatcagctgcccaat
ctgatgggcatcaaggctgtaggggtggggcagggtgggggctggaacccttgcaaggag
cacaatgggggctgctctcacctctgtctcaaccggccaggcaaccactccgtctgtgcc
tgtcagataggttacgagttggctacagacggacacacctgtgtggttcctgaagctttc
ctgttgtttgctagacgagaaaacatcggaaggataagcattgagaatgctgacaatgat
gccatcattccagtgactggagtaaaggatgcaagtgctctcgatttcgacatgactgac
agccgaatctactggaccgacgtgaaagtgaaggcaatcacgagagctttcatcaacgga
tcgcaggtcgaacgcatcgtggagtttggtctggactccccagaagggctcgctgtggac
tgggtggcacacaacatctactgggctgacactgggagtaaacgtatcgaagtcgccaga
ttggacggtaccagccggaaagtacttctatggaagagcatcgaggagcctaggagtatc
gctttggatcctagcgaatgttacatgtactggagcgactggggaggtcagggcagtgtg
gagcgtgccaccatggatggaacctctcacttagtcatattggcgaaggtgggacgagcc
aacggtctgaccgtggactacacggagagacgcctctactggtcccaactgcacggcaca
cccgccatcgaggtggctgacttggacggcaagcaccgttccaccgtcatttccaaggac
atcggcagaccgtttgcacttactcagtaccaggactacatctactgggccgactggaac
agcggtagtatcgaacgggtggagaaacactacggcgccaaccgcacactgcttcaccgc
cagctggaccacgtgacggacctacaagtgttccatactagtagacagctggggtggaat
ctgtgcgcgggagacaacggaggctgcagtcacctgtgcctggcacggccgggggacagt
agtcgacactgtgcttgtcccacacactacacgctgcacaacaagacttgccaagcacca
acagcattcctgctatattctcaacgaaacagtatcaatagactaatatgggaaacggat
gactgccctgatgttcctttaccaatccaaaatttgaaaaatgtacgagccattgaattt
gacccagtgaaacagtttctatattggattgacggtcgcacgcagtctatcaggcgatcc
caagacaccggatcttcagtagggatcgttgtggcggggggtggggcggtccaccaacat
ccctacgacctcgccatcgacccctacacccgcctgctgtactggagctgtgctgtgggc
gacacaatcaacgtaacacgactcagcaatggttcggctctgggagtcgtagtgcgaggt
gccaacggggagaaaccgaggaacattgcactgcaccccgacaaagggttcctgttctgg
acggacgtcggtgtcaagtcccgagtgctgcggtcacggctggacggccagaagagactg
gtgattgctgaagagaaggaccaggtgacagctctggctgtagacaaggaccatgatctt
atcttctggtccacaaaacagcgtatcaacgttgctgatctcacaggaaaaaacatgcga
acagtggtgtcgagtcagctgagccaggtgtcaggtctggcggtgctgggaaactacctg
tactggatggacaaggatcaacagctgattgagcgagtggacaagaacacgggactgtcc
cgggaggttatcatgtccaaagtggcccaccttaccgacctggtggccatcacaaacatt
aaaaatgcaaaccatccgtgtgggccattgacgaatcacggaggctgtactcacctgtgc
ctgccgctgccccacggatccacagagtgcagttgtccccaggggttaatactacacgag
gaccgtgccacctgctcagccttacctgcctgtggagtcgatcacttcacctgcggcgca
ccctcggctgactgcatcccctctgcatggcgctgcgatggccagagcgactgtcctgac
agcagcgatgagatgggctgccccgagtgtacccagcatcagttccgatgtcactcagga
cagtgtattgatgtgagctggctttgtgacggcaactcgcagtgccctgatggctcagac
gagatctcttgctgtacgacctcgtccccctcactgttcccgtgtaagctgggtgggccc
tgtgtgtcgataacagaagtttgtgatggctggtccaactgtcctgatggttcagacgag
agccctctagcctgccagacacaccccccacccaggttcgtcagcaacccaccccagggc
cacgtcacactctacatcctcatctccatctcctgcctggcatccttcgctgccgctctc
taccgatgcaagaaaaggttcgccccggccagtccagggctgccttgtgaggactctgca
gcggaccctctgtcccccaagccgttacgggtggtgcccaaaaccggacctaccataccg
aagcctgccccggctgtcaggatgacggcgattaacggaaccagtagctccagctatgac
cgtagccacgtcactggagcctccagctcggcctcattgctgtgctatcctctgaaccct
ccaccgtcccccgccactacggcacagcgcgaggagtattgctgtccccgttacaggccc
ccgcccccgacgccctgcagtacagacgtctgtgacgagagtgactccaactatcggtgc
gatagtgacccctttccaccaccccccaccccccggtcccactcgtcggggccaccctct
ccctcatcctccacatacttccatcccctccctcccccaccctcacccaacagcaggtgt
cccaactgctga
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