Homalodisca vitripennis (glassy-winged sharpshooter): 124364211
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Entry
124364211 CDS
T09217
Name
(RefSeq) RB1-inducible coiled-coil protein 1-like isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
hvi
Homalodisca vitripennis (glassy-winged sharpshooter)
Pathway
hvi04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
hvi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124364211
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hvi01009
]
124364211
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hvi04131
]
124364211
03029 Mitochondrial biogenesis [BR:
hvi03029
]
124364211
Protein phosphatases and associated proteins [BR:
hvi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124364211
Membrane trafficking [BR:
hvi04131
]
Autophagy
Autophagosome formation proteins
ULK complex
124364211
Mitochondrial biogenesis [BR:
hvi03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
124364211
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG17_like
ATG11
TBK1_ULD
PKcGMP_CC
Baculo_PEP_C
DUF5623
FANCI_S2
Kinesin_assoc
Motif
Other DBs
NCBI-GeneID:
124364211
NCBI-ProteinID:
XP_046675479
LinkDB
All DBs
Position
6:complement(31855131..31941572)
Genome browser
AA seq
1115 aa
AA seq
DB search
MLYMFDVDAGTMMTFDMSLSMDLVSVLQEHIQKVLKIPIVNQVLLVSGGIALSPSQRVCA
FSAGTDTNPIFLYNKQYYLHPGNVAPLDQMVFDAGPDLPDMQAEVDASLMLPDTINSVMI
RSQLAHRFCEMAQTEMQACERLVHEQHLQHQGFMAVIANMDDTVPSVKNSTEQFLNMFQE
FLENKPHYLQLSETVQDVAATLATIPLLPSLVEQVPQDPMTSITSCKDIEGQRDNMSLLD
WLQLRSSNDSFHQLSQICTRGLQQYTEEMVSNIQILLTNMLTSFTDENLRSIKGLPERFS
GLEKLLKDARVIVQEQGDLAQAIHQNSTRASNLGDNSILPDLCASHRRQLILMQTNHKRI
KDVHRRVVIAKTELIQTIYIRLKWAYGVECQMSILSERIHMISSGLKTLKDELNILQQTH
SVPHLYLTAVAEVVRRRTFSHAFLMWANDLACQLCAVHSEEVARRQNFQTQFEGHILSNL
FPGLGDVPPPFATQAPKSFDTKLPKLGVDDIRMLQDKVADFALSVSLPDLNAITQFFVSK
SITNPMKPKEVERLVEEVTAMEQPLESQAAGSGYLATVLPIMDRGFESETDTEEFEKVGQ
SPTDMALDTEKRADSAQEQKVSQLHQTKEEVQKSIVTIRNDLSSLKEWLQSEHNHVHSFL
QQLTTAYRSEVDLKDQHIYQLRQEMANREEEIEELRKRLTLSLQAETRERELREQVEAAR
DLAVREATEQLLQDHRREMEAVRSRFRLMATATSMERSPSELSLERMDHQRMSLESEEVV
AQVRAELVQERDRAVAEERQRWQSKLDHEIHQLKIRADAEKQIWFNEAMRRVLVEKDRQL
ESLRLHSLHIESECQKHRETIQRLTGTSGSVGSESSLLERVEALEAAKVRLEAELAEARS
SPTPHGTPSHQDMSTSIALCDGDGGLRDAATSPDPARKTQLKEKLSKSTTTLIQQGRVSV
GSCNIGDAVLVVWEENYHSYMILQESSTLYFLHPDSLAAMSLFPSSDGSPRQIYYCTAEV
VEKEYCHARKNLDAANFSRLVKRIENISIRETPETSQPTPQQSACESLDETNTGLVTPQP
VNRYNVAKGTKFYRVKVKPLTVLTHHSQSSSGCSA
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atgttgtacatgtttgatgttgatgctgggaccatgatgacctttgatatgagcctgagt
atggacctagtgtccgtactgcaggaacatatccagaaggttctcaagatccccatcgtt
aatcaagtattgctcgtgagtggggggatagcactctcgccaagccaaagagtgtgcgca
ttctccgccggcacggataccaacccgatcttcctgtacaacaaacaatactaccttcat
cccggaaatgtagctccactggatcagatggtctttgatgctggcccagacttgccggac
atgcaggcggaggtggacgcgagtttgatgctgcctgacactataaacagtgttatgatc
cggtcccagctggcccaccgtttctgtgagatggcacagacagaaatgcaagcatgcgag
cgtttggtgcatgaacagcatcttcagcatcagggttttatggctgtaatcgccaacatg
gatgatacagtgcctagtgtcaagaacagtacagaacagtttctgaacatgttccaggag
tttctggagaacaagccgcactatttacaactttcagaaactgtacaagacgtggcagca
acgttggccaccatccctctgctgccgagcttagtggagcaagtacctcaggaccctatg
acctccatcaccagctgcaaggacattgaggggcagcgggacaacatgtcactactcgac
tggctgcagctgcggagttccaatgacagcttccaccaactgtcgcagatttgtaccagg
ggcttacaacagtacactgaggagatggtctccaatatccagattttgctcacaaatatg
ctgactagctttacggatgagaacttgagatcaatcaaaggcctcccagagaggttctcc
ggtctggagaaactgctgaaggatgcccgtgtaattgtgcaggaacagggtgacctcgct
caggctatccatcagaactctacgcgagcgagtaatctgggcgataactccatactgccg
gacctctgcgccagccatcggcgtcagttgattctgatgcagacaaaccataagagaatc
aaggatgtccaccggcgcgtagtaatcgcgaagacagagcttatccagaccatctatata
cggttgaagtgggcgtatggagttgagtgccagatgtcaatattgtcagagcgcattcac
atgatttcctccgggttgaagacattgaaggacgagttgaacattcttcagcagacccac
agtgttccacatctctacttgacagctgtggctgaggtggtgcgcaggcgtaccttctct
catgcgtttcttatgtgggccaatgaccttgcctgccaactgtgcgcagttcactctgaa
gaggttgccagacgccagaacttccagacccaattcgagggccacatcttgagcaacctt
tttcctggactgggcgatgtgcccccaccatttgcaacccaggcgccaaagtcttttgat
accaagctgcccaagttgggtgtggatgatatacggatgctgcaagataaggttgccgat
tttgctttgtcagtttcattgcctgatctcaacgcaatcactcagttctttgtgtcaaaa
tctattacgaaccccatgaaaccgaaggaggtggagcgattggtggaagaagtgacagcg
atggaacagcccttagagagccaagccgctgggtctgggtatttagcgacagtcttgccg
atcatggacagggggtttgagtcagaaactgacacagaagaatttgagaaggtcggtcaa
agtcctaccgatatggccttggacacggagaagagggcagatagtgctcaagagcagaag
gtgagtcaactgcaccagacgaaggaggaagtgcagaaatccatagttaccataaggaat
gatctcagttcgttgaaggaatggcttcagagtgagcacaatcacgtccacagcttcctg
cagcagttgaccactgcctaccgcagtgaggtcgacctcaaggatcaacacatctatcag
ctgcgacaggagatggccaatcgcgaggaggagattgaagaactgcggaagcgtctgacg
ctgagcctgcaggcggaaacaagggagagggagctgagagagcaggtggaggccgcaagg
gacctagcggtgcgtgaggccacagaacagctgctccaggatcatcgtcgggagatggag
gcagtccgcagtcgcttccgtctcatggccacagccacatcgatggagcgcagtccttcc
gagctcagtctggagaggatggaccaccagagaatgagcctggagagcgaggaggtggtg
gcgcaggtgcgggccgagctggtgcaggagcgtgaccgcgcagtagcagaagaacgtcag
cgctggcagagcaagctggaccatgagatacaccagctcaagatacgggcggacgcagaa
aagcagatctggttcaacgaggcaatgcgccgggtactggtggagaaagacagacaactg
gagagtctacgactgcacagcctccatattgagtcagagtgccagaaacaccgagagacc
attcaacgacttaccggcaccagtgggagtgtgggcagtgagagttcacttctggagagg
gtggaggcactggaggcggccaaggtgagactggaggctgagctggcggaggctcggagc
tcccccaccccccacggcaccccctctcatcaggacatgagcacatccattgcactgtgc
gatggtgatggagggttgcgagatgctgcaaccagtccagatcctgcccggaaaactcaa
ctgaaagagaagctgtcaaaaagtacaacaacactaattcagcagggaagagtcagcgtt
ggctcgtgtaacattggagacgcagtcctggtcgtatgggaggagaactaccacagctat
atgatcctgcaggagagctccacactttatttcctgcatccagacagcttggctgctatg
tcgctctttccatcttcagatggcagtccgaggcagatctactactgtacggctgaagtc
gtggaaaaagaatactgccatgccagaaagaatcttgatgctgctaacttcagtcgtctg
gtaaaacgaatagagaatatttccatccgggaaacacctgaaacgagtcaaccaacacct
caacagtctgcgtgtgaaagtctagatgaaacaaacactgggcttgttacacctcagccg
gtgaatcgttacaacgtggccaaaggtaccaagttctacagagtgaaggtgaagcctctc
actgtcctgacccaccactcccagtccagcagcggctgcagcgcctag
DBGET
integrated database retrieval system
