Homalodisca vitripennis (glassy-winged sharpshooter): 124364461
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Entry
124364461 CDS
T09217
Name
(RefSeq) LOW QUALITY PROTEIN: transient receptor potential cation channel subfamily A member 1-like
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
hvi
Homalodisca vitripennis (glassy-winged sharpshooter)
Brite
KEGG Orthology (KO) [BR:
hvi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hvi04040
]
124364461
Ion channels [BR:
hvi04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
124364461
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ion_trans
Motif
Other DBs
NCBI-GeneID:
124364461
NCBI-ProteinID:
XP_046675927
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Position
1:complement(72562431..72710038)
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AA seq
1224 aa
AA seq
DB search
MPANNKWLCSAQVLGWINSHTDRVNNERECECKPPWDKGKGSTEMHIMVGEEKAAVVPLL
PQGVGRVEGEVCLLTDSPYRILRAAESGNLEDFNRLFLAEPARLGVRDSKGRAAAHQAAA
RGKLNILQFIYSHGGDLNIQDHTGNTPLHIAVEHNSLEVVDYLLQMGVDTSVLNHKKQAA
LHLATELNRVSVLERMTRYKGIIDTKQGGEHGRTALHIAAILDHDECARILITQLGACPR
RSCNNGYYPIHEAAKNASSRTMEVFLQWSESIGCTREEMISFYDAEGNVPLHSAVHSGDF
KAVELCLKSGAKISTQQHDLSTPVHLACAQGAIDIVKLMFGLQPTEKSLSLASCDIQKMT
PLHCAAMFDRVEIVHFLIQEGADINPLDKERRSPLLLAASRGGWRTVLALIRLGADIHLK
DSNHRNVLHLVVMNGGRLEEFAQEVIKAQSTSSLQQLLNEKDNTGCSPLHYASREGHIRS
LENLIRLGACINLKNNNNESPLHFAARYGRFNTVKQLLDSEKGSFIINETDGEGLTPLHI
ASQQGHTKVVQLLLNRGALLHRDHNGRNPLHLAAMSGYTQTMELLQSVHSHLLDQVDKDG
NTALHLATMENKPNSIALLLSMNCKLQYNNIDLSAIDYAIYYKFPEAALAMVTHDTRAQE
VMSLRSDKHPCVTLALIASMPRVFESVQDKCITKANCKKDSKSFYIKYSFSCLQCPRLYA
QMDQKTGEALTISKAIPLPALNIKYSFDYYQPSPAKLAVQRKALNNVKWRPDPLEVVNAM
VSHGRVELLAHPLSQKYLQMKWNSYGKYFHLAHLLFYLIFLCFVTTFSSLLTDSSKVSVT
TNSTSITMDEEGDELVGTPVMYTCSTAIVMYVVVNMVREGLQLYQQRWQYLLDPTNLVSW
MLYISTIIMILPVYHGNVNEIQVSCASITVFLSWFTLLLNLQRFDMVGIYVVMFLEILQT
LIKVLVVFSILIIAFGLAFYILLSRGEHLSFKTVPMSLVRTFSMMLGEIDFLGTYVQPYY
LRDEEGRTLPFPIPAFLILALFMVFMPILLMNLLIGLAVGDIESVRRNAQLKRLAMQVVL
HTELERKLPQVLLEKVDKMELIEYPNDKCKLGFLDQMLRKWLCNPFSDDGLEMVLENNED
YVTTEMDKMKSKLRNISKALDTQQQLLRLIVQKMEIKTEADEMDEGVSPKELQPMPGVGC
KWTSPRVRNKLRTALSFSKAHPPK
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgccggcaaacaataagtggctatgcagtgcccaggtgctgggatggatcaactctcat
actgacagagtcaacaatgaacgtgagtgtgagtgcaagccaccgtgggacaaggggaag
ggaagcacggagatgcacatcatggttggggaggagaaggctgccgtggtacctctgcta
ccccagggagtgggccgagtggagggcgaggtctgcctactcactgacagtccataccgc
attcttagggcagccgagagcgggaacttggaagacttcaaccgtctgttcttggcggaa
ccggcgcgcttgggtgtccgagactccaaggggcgggctgctgcacatcaggcggcggct
cgcggtaaactgaacattctgcagttcatctacagccatggtggtgatctcaatatacaa
gaccacacgggcaacacgccgctgcacattgcggttgaacacaattctctagaggtcgtg
gactaccttctgcaaatgggcgtagacacgagcgtgctgaaccacaagaagcaggctgct
ctgcacctggccacggagctcaacagggtgtcagtgctggaacggatgacccgatacaag
ggcatcatcgatacgaaacaaggaggggaacacgggcgcacggccctccacatcgctgct
atactggaccacgacgagtgtgcccgtattctgataactcagctgggtgcatgccctaga
aggtcctgcaacaatggatactacccaatacatgaggctgccaagaatgcttcatctcgc
accatggaagtcttcctgcagtggagtgaatccatcggctgcacgagggaagagatgatc
tctttctacgatgctgagggcaatgtacctctacattcagcagtacacagtggggacttt
aaggcagtggaattatgcctcaagtccggagccaagatctcgactcagcagcatgacctt
tccacccctgtccacttggcttgtgcacagggagccattgacattgtaaaactcatgttt
ggactgcagcccacagagaagtctctctccctagcttcttgcgacatacagaagatgact
cccctacactgtgctgctatgtttgacagggtggagattgttcatttcctcattcaagag
ggagccgatattaaccccttggataaggagaggcgctcaccccttctgctggcggcatca
cgaggtggttggcgtactgtactggctctcatccgactgggtgcggacatccacctcaaa
gactcaaaccacagaaatgtgctgcacctggttgtcatgaatggtggcagactggaggag
tttgctcaagaagttatcaaggcgcagtcaacgagtagtctgcaacagttgctgaatgag
aaggataatacaggatgttcgccccttcactatgccagccgtgagggtcacatccgcagt
ctagagaacctcatcaggctcggtgcctgcatcaacctcaagaacaacaacaacgagagc
cctctgcactttgctgctagatatggacgtttcaacacagtaaagcaactgctggattca
gagaaaggttcttttatcattaacgaaacagatggtgaggggttaacccctcttcacatt
gcttcacaacaaggtcatactaaagtggtccaactgttgctgaaccgaggagccctgctg
caccgagaccacaatggtcgtaaccccctccacttggccgccatgagtggctacacccaa
accatggaactgctgcagtctgttcactctcacctgctagaccaggtggacaaggacggg
aacactgctctccacctggccaccatggagaacaagcccaactcaattgcactgctgttg
tcaatgaactgtaagctccaatataataatattgacctgagtgctatagactacgctatc
tactacaagttccctgaggctgccctggccatggtcacccacgacaccagagcccaagag
gtcatgtctctaagatcggacaaacacccttgtgtcacactagcactgattgcatccatg
ccacgagtattcgagtcagtccaggacaagtgcatcaccaaggcaaactgcaaaaaagac
tccaaatccttctatatcaaatacagcttctcttgtctgcaatgccctcgcctgtacgct
cagatggaccagaagacaggggaagccctcactatttctaaagccattcctcttccagct
ttaaatatcaaatactcgtttgactactaccagccatctccggccaagctggcggtgcag
cgaaaggctctaaacaacgtaaagtggaggcctgaccctcttgaggtggtcaatgctatg
gtgtctcatggacgggtggagcttctggctcatcctctgagccagaaatacctacaaatg
aagtggaattcttatggcaaatacttccatctggctcacctgctcttctacctcattttc
ctgtgttttgtgactacgttctcctccctgcttacggacagttccaaggtttctgtgact
accaacagcactagcatcactatggatgaagaaggtgatgagctagtggggacccctgtg
atgtacacatgttccactgccatcgtaatgtatgtggtggtgaacatggtgagagagggc
ttgcagctctatcagcaacgctggcaatatcttcttgatcccaccaacttggtcagctgg
atgctctacatcagcacaatcatcatgattctccctgtctaccacggcaatgtcaatgag
atccaggtctcttgtgcctccatcaccgtctttctcagctggttcactctgctcctgaac
ctgcaaaggtttgacatggttggaatatatgtggtgatgttcttggaaattctgcagacc
ctaataaaggtgcttgtggtgttctccatacttatcatagcatttggtttggcattttac
atccttctttccaggggtgaacacctttctttcaaaactgttccaatgtcactggtcagg
acattctcaatgatgttgggtgagattgacttcctaggaacttatgtccagccgtactac
ttgagagatgaagaggggcgcactctaccattccctatcccagcattcttgatacttgct
ctcttcatggttttcatgcctattctactgatgaacctcctcatcggtttggctgtcgga
gatattgagtctgtcagaagaaatgctcaactgaaaagacttgctatgcaggtggttctc
cacacggagctggagcgcaagctaccacaggtgctactggagaaggtggacaagatggaa
ctcatcgagtaccccaatgacaagtgcaagttgggttttcttgatcagatgttgcgaaag
tggctttgcaaccccttctctgatgatggtcttgaaatggtattggaaaacaatgaggat
tacgtaactacagaaatggacaaaatgaaatcgaaactgagaaatatttctaaggctctg
gatacacagcaacagctcctaagacttatcgttcagaaaatggagataaagacagaagca
gatgagatggatgaaggagtgtcaccgaaggagctacagccgatgccaggggttggctgc
aagtggacaagtccccgtgtgcgcaacaagctgcggacagctcttagcttctcgaaggca
cacccgcccaagtag
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