Homalodisca vitripennis (glassy-winged sharpshooter): 124364480
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Entry
124364480 CDS
T09217
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein U-like protein 1 isoform X1
KO
K15047
heterogeneous nuclear ribonucleoprotein U-like protein 1
Organism
hvi
Homalodisca vitripennis (glassy-winged sharpshooter)
Brite
KEGG Orthology (KO) [BR:
hvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hvi03041
]
124364480
03400 DNA repair and recombination proteins [BR:
hvi03400
]
124364480
Spliceosome [BR:
hvi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
124364480
DNA repair and recombination proteins [BR:
hvi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
124364480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_33
SAP
AAA_18
AAA_17
Zeta_toxin
Rad17
AAA_22
AAA
nSTAND3
Motif
Other DBs
NCBI-GeneID:
124364480
NCBI-ProteinID:
XP_046675962
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All DBs
Position
6:84318460..84403415
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AA seq
1153 aa
AA seq
DB search
MDPAKLKVVELRAELSARGLDTKGVKAVLVDRLKQALKEETGQEVPDTSIVDTSTEDFGT
VEEKTSQSEPEQTSETEQTSEAEQERVPTPDQERVPTPEPERVPSPEPERVPSPEPERVP
SPEQERVPTPEPEREPTPDPEKKEEEHSKSEEQISEEPTSAEVVEEKNEKENITEDTKME
EVSVKKEPEYEDFKQNFEEKPNFGDYQQGYDDENKEHYEADVKMEPGTEIKEEDQEQDRK
RKRSRWSPQQQKQGWGQSTGWTKKDDEPELDDKAVVLGWYDSDLNLVIEKSDFLEAAPLS
SQGFGYVWAGCRATFGFNQGKVCFEVKLLENLDVSHLEDEPSPHVLRVGWSVLSASLMLG
EEPMSFGYGGTAKASTNCKFNNYGTTFVVGDTVTAYLDYGSRVKISYAVNGKYLGEAFNI
PSSQINEQPLFPHLLSKNIKFRVNFGQTETEFPIEAGYTWAANVAEDQRVAGPRRPERRE
DCEMLMMCGLPGCGKTTWANAFVKEHPDKYYNILGTNSLIEKMKIQGLARKRNYHGRWDV
LIDKCTKCLNKLLEMAAGRRRNYILDQTNVYPSAQKRKMRNFGGFVRRAIVIVPTDEEFQ
RRCAKREAEEGKDIPDSAVLEMKANFRLPEQGEFFDEVRYIELNEEESRPLVEQYNKEGR
AAGFGQQAPFSNQGSGGGSGGKRFRGAPPRGGSGGGGFRGGNRGGGGFGGVLDRRGDRPG
GDRGGGGGFRSGGMDRGGRGGWQPRGGGGDRGGRGGWRDRSPGGGGGYDRDMDNRGPGGG
PWRNNRNNDHRDRPYDRNQRGGRGGRGGGGFDRNNFRDNEGGYGGRGGGGFRDNDYNRGG
SGSGGSGSGYDRDDYNNRGGGGGGYNQRDSGYNNRDGGFRDGGGRGRGGGGGGRGSFDRD
QRGGGRGGFDRNRGGYNDRRGGGGGNRDGGYDRNRGGPDRGPRDNKGGNSGNQNNQGGGG
GGGGQGWGNQGYNSGWGQGGGGYNNQQQQQPQGYNQGSGGGYNQGGGGGGFNQGGGGGGG
YNQQGNQPPATGWGQQAWANKGGYGTGANQQQPAQAPPTGATPTATPAATGYNTTGGYTP
QQTGYNQAQYPQGYWGQYGYGQGWTQNADGTYSYPQGWQQYGYNYGQAGAAAAMATPAAA
VGNPAAATQPAAK
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atggatccagctaaacttaaagttgtagaattgcgcgcggaattatctgcaagaggactt
gacacgaaaggagtaaaagcggttttagttgatcggctgaagcaagccctcaaagaagaa
accggacaagaggtaccagatacctcaatcgttgacacatctacagaggattttggaaca
gtagaggagaaaacatcccaatctgaaccagaacagacatctgagacagaacagacatct
gaagcagaacaagagagagtacccacacctgatcaagagagagtacccacaccagaacca
gagagagtaccctcaccagaaccagagagagtaccctcaccagaaccagagagagtaccc
tcaccagaacaagagagagtacccacaccagaaccagaaagggaaccaactcctgatcct
gaaaaaaaagaggaagagcattcaaaatcagaggaacaaatatcagaagagcccacttct
gcagaagtggtagaggaaaagaacgagaaggaaaacattactgaagatacaaagatggag
gaagtttcagtaaaaaaagaacccgaatatgaagatttcaaacaaaattttgaagaaaag
ccaaattttggtgactatcagcagggctatgatgatgagaataaagaacattatgaagct
gatgtcaagatggagccgggtacagagattaaagaagaagaccaagaacaggatagaaag
agaaagcgttcaagatggagcccacagcaacagaagcaaggctggggccagagtacaggc
tggaccaagaaggatgatgagcctgagttggatgacaaagctgttgttctcggctggtat
gactcggatttgaacttggtgatagagaagtctgatttcttggaagctgctcccttgagt
agccaaggatttggttatgtctgggccggctgtagagccacttttggttttaaccagggc
aaagtgtgctttgaggtcaagctactggaaaatcttgatgtcagccatctggaggacgag
ccaagtcctcatgtcttgcgagtcggctggtcggtcctgtctgcgtccttgatgcttggt
gaggaaccaatgtcctttggctatggtggcactgcgaaagcttccacaaactgtaagttc
aacaactatggaacaacatttgttgttggcgacacagtcacagcgtatttggattatggg
agccgtgtgaagatatcttatgctgtgaatggcaagtacctgggagaggcctttaatatc
ccatcatcccagataaacgagcagcctctgtttccccatcttctctccaaaaacatcaag
ttccgggtgaattttggccagacagagacagagtttccaatagaggcaggatacacctgg
gctgccaatgtggctgaggatcagagagttgctggcccacgccgccctgagaggagagag
gattgcgagatgctgatgatgtgcggcctgcctggttgtggaaaaaccacctgggccaat
gccttcgtcaaagagcatccggataagtactataacatcctgggcaccaacagcctcatc
gagaagatgaagatacaaggactggcgcgcaaacgcaactaccatggtcgttgggacgtg
ctcattgacaagtgcaccaagtgtctcaacaaactgctggagatggcagcaggccgtcgt
cgcaactacatcctcgatcagacgaatgtatacccgagcgcacaaaaacgcaaaatgcgc
aactttggtggcttcgttcgtcgagcgatcgttatagtgcccactgacgaagaattccag
cgcagatgtgccaaacgagaggcagaagaaggaaaagacattcctgactcagctgtactg
gagatgaaagccaacttccggctgccagaacaaggagagttctttgacgaggtgagatac
atagagctgaacgaagaggagagtcgaccactagtggagcagtacaacaaggagggtcgg
gctgctggcttcgggcaacaagctccgtttagcaaccagggcagtggtggaggcagcggc
ggcaagcggttccggggagcacctcctcgaggcggtagcggtggcggtggcttccgtggt
ggcaaccgtggtggaggaggtttcggaggggtcttggaccggcgaggagacagacctgga
ggtgacagaggaggtggtggtggattcagaagtggaggcatggatcgaggagggagagga
ggttggcagccaagaggaggaggaggagaccgaggtggcagaggtggttggagagacagg
agtcctggtggaggaggtggttatgacagagatatggataacaggggaccgggaggtggg
ccctggagaaataaccgcaacaatgatcaccgtgaccgcccatatgatcgcaatcaacgt
gggggtcgaggaggacgaggtggtggtggctttgatcgcaacaacttcagggacaatgaa
ggtggttatggtggtagagggggtggtggcttccgagacaatgactataatcgtggtggt
agtggtagtggcggcagtggcagtggctatgatagagatgactacaacaatcgtggtggt
ggcggcggcggctacaatcagcgagatagtggctacaataacagagatggaggatttaga
gatggaggtggccgtggcagaggcggtggtggaggaggtagaggcagctttgatcgtgat
caaaggggaggcggcagaggtggctttgataggaacagaggtggctacaatgacaggcga
ggaggtggtggaggaaacagagacggaggctatgatcgcaacagagggggaccggacagg
ggacctcgagataacaagggcggtaactctggaaaccaaaacaaccaaggaggtggagga
ggaggagggggtcaaggttggggcaaccagggctacaactctggctggggtcaaggagga
ggtggctacaataaccagcagcaacagcaaccacagggctacaaccagggcagtggcggt
ggctacaatcagggtggtgggggtggtggtttcaaccagggtgggggtggaggtggcggc
tacaaccagcagggcaaccagccacctgctacaggctggggtcagcaggcctgggcaaat
aaaggtggctatgggacaggtgcaaatcaacaacagcctgcccaagcccccccaactggt
gcaactccaacagcaacacctgcagcaactggttacaacactactggtggttacacacca
cagcagaccggttacaaccaggcacagtaccctcagggctattggggccagtacggctac
ggccagggctggactcagaatgcagacgggacctactcctacccgcaaggctggcaacaa
tacggttataactacggacaggctggagccgcggcagccatggcgacacctgcagccgca
gttggcaaccctgcagctgccacgcagccagctgccaagtga
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