KEGG T09217: 124364512

Homalodisca vitripennis (glassy-winged sharpshooter): 124364512

Entry

124364512         CDS       T09217

Name

(RefSeq) roquin-1 isoform X1

K15690

RING finger and CCCH-type zinc finger domain-containing protein

Organism

hvi Homalodisca vitripennis (glassy-winged sharpshooter)

Brite

KEGG Orthology (KO) [BR:hvi00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:hvi03000]
    124364512
   04121 Ubiquitin system [BR:hvi04121]
    124364512
Transcription factors [BR:hvi03000]
Eukaryotic type
  Zinc finger
   Cys3His zinc factors
    124364512
Ubiquitin system [BR:hvi04121]
Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    124364512

SSDB

Motif

Pfam:

Roquin_1_2-like_ROQ ROQ_II zf-CCCH zf-RING_5 zf-RING_UBOX zf_CCCH_4 zf-RING_2 zf-C3HC4 zf-C3HC4_4 DUF2443 zf-CCCH_4 zf-C3HC4_2 Vesi_VP2 zf-CCCH_12 PaaA_PaaC zf-CCCH_DUS3L zf-CCCH_UNK Prok-RING_4 zf-RING_6

Other DBs

NCBI-GeneID:

124364512

NCBI-ProteinID:

XP_046676015

LinkDB

Position

1:complement(72904582..72981296)

AA seq 880 aa
MPIQAPQWTEFLSCPVCCNEFDATLRSPVSLACAHTVCKTCLVNLHRKQCPFDQTPITTE
LEKLPVNTALLQLVGSSVTNCESPPPSHLGKDDTHSYLQAKKCIEELALYLKPFSSGSGT
GVLSRPMQRKLVTLINCQLMEEEGRSRAMRAARSLGERTVTELILQHQNPQQLSANLWAA
VRARGCQFLGPAMQEEVLKLVLLALEDGSALSRKVLVMFVVQRLEPHFPQASKTSIGHVV
QLLYRASCFKVSKREGDSSLMQLKEEFRTYEALRREHDAQIVQIATEAGLRIAPDQWSAL
LYGDTAHKSHMQSIIDKLQTPQSFAQSVQELVIALQRTGDPGSLSILRPHLELLAAIDPS
PESSVCSWPEVWQGVEAARLVVAGLVEFIRVHGARKPPLGEGGSLATPHAHNAKYKISLC
RDLGLRGTCPRGVNCTFAHSEDELEKYRSKSRKVVARPGCKEEDFLADSLFSHGDEVIFN
SQQHKAFNSNTGVRVNELNNSLFPIKSPAPAHSTYQPRQQQMFAPTPGTYTPDIYSAAPH
NMVLSSGGQLYAPQPDYGSTAPPQTDHRPIEPAHTQAWLSHLPPPPPSKMQRYNNKNLML
LQQRKQEIVTQLERNKCNTPLRSDTQTCTSTYSMWNSGGILHTTSGPNSQVSLASSYRPV
LYRSDSVLTDDEFIPFEPPIVSKYGPISRAAAAAAKALMRPQAVQSSAVFGEATISTPGL
RRPVPAPSPVAPAWPPQFNGYQQQALVSPATGSLSDYITIGHGIIDSPQIVHRPPLEQNK
ECLIVQLKNLEKQINKIKQQQKQEILEKEKEWRISQLVSSHGGVGALAWSNDGWSSTGYH
SDDEDSFDIAHNMRELELTLQGELEEDDGKMWPHVDEANK

NT seq 2643 nt +upstreamnt +downstreamnt
atgcccattcaggcaccacagtggacggagtttctgtcatgtccggtctgttgtaatgag
tttgatgcaacactccgaagtcctgtcagcttggcttgtgcacacaccgtctgtaaaact
tgtcttgtcaatttgcatcgcaagcaatgcccgttcgatcagacacctatcacaacggaa
ctagagaagttgccagtaaacacggcgctgctgcaactggtcggctcctcggtgaccaac
tgcgagagtcctccacccagccaccttggcaaggacgacacccacagttatttacaggcc
aagaaatgtatcgaggaacttgcgctctacctgaagcccttctcctccggcagtgggact
ggagtgttgtctcggcctatgcagcgcaagttggtaacactgatcaactgccaattaatg
gaggaagaggggaggtcccgtgcgatgcgtgccgcacgttccctgggcgagagaacagtt
accgaactgattttgcagcaccaaaacccgcagcagctgtcggccaacctgtgggcagca
gtgcgtgcacgcggttgtcaatttttgggaccagcaatgcaagaggaggtgttgaagttg
gtcctgttggcactggaggacggttctgcactttctcggaaggtcctggttatgtttgta
gtgcagcggcttgagccacatttcccacaggcctctaagaccagtataggtcatgtggtc
cagctgctgtacagggcatcttgctttaaggtgtcaaagagagaaggagactcatcactc
atgcagttaaaggaagagttccgtacatacgaggctctgcgacgtgaacatgatgcccaa
atcgtgcagattgccacagaggcaggattacgcattgcaccagaccaatggtcggccctg
ctttacggagacactgcacataagtcccacatgcagagtatcatcgacaagctgcagaca
ccacagagcttcgcacagagtgtgcaagagctggtgatagcactgcagcgaacaggtgac
cctggcagcctcagcatcctgcgcccccacttggagttgttggcggctattgatcccagt
cctgagtcgtcggtgtgtagttggcctgaggtgtggcagggtgtggaagctgcaaggctt
gtagtggccggcctggtggagtttataagggtgcatggtgcacgcaagcctccactgggc
gagggaggatcactggccacaccacatgcccataatgctaagtacaagatcagcctgtgt
cgtgacctcggactccggggcacctgtccccgtggtgtcaactgcacctttgcccattct
gaagacgaactcgagaagtaccgctccaagagtcgcaaggtcgtggcaagacctggctgc
aaggaggaagattttctggcagactcactgtttagtcatggagatgaagtgatctttaac
agccagcaacacaaagccttcaatagcaatacaggagtaagggtcaatgagttgaacaac
agtttgttcccgatcaagagtccggctccagctcactcaacttatcagcctcgacaacag
cagatgtttgcacccactccaggcacctacactcctgacatctacagtgctgcaccacac
aatatggtgctgagcagtggcggacagttgtatgcaccacagcctgactacggatctact
gccccgccacagacagaccaccgtcccatagaacctgcccacacccaggcgtggctctcc
catcttcctcctcctccaccttccaagatgcagagatacaataataagaacttgatgttg
ttgcaacaacggaaacaagagatagttacccagctggagcgaaataaatgtaacactcct
ctacgctcagatacgcaaacttgcacatcaacatattccatgtggaactctggaggtatc
ctgcacacaacttcaggtcccaactcgcaagtgagtctggccagctcgtatcgtcctgtc
ctctacagatctgattctgtgctgacggacgatgagttcatcccattcgaaccaccaata
gtgagcaagtatggaccaatatcgcgggcagcggcagctgcagccaaggcactgatgagg
ccccaggctgttcagagctcagcagtgtttggtgaggctactatctccacccctggactc
cgtcgacccgtccctgcccccagccctgtcgcccccgcctggccccctcagttcaatggg
taccagcagcaggctttggtgagcccggcaactggcagtctcagtgactacatcaccatc
ggccacggcatcattgactctccgcaaatcgtccacaggcctcccctcgagcagaataaa
gagtgtttaatcgttcagctgaagaatctagagaagcaaataaataaaattaagcagcag
cagaagcaagaaatccttgaaaaagagaaagaatggagaatatcccagctggtttcgagt
cacgggggagtaggggctctagcctggagtaatgatggctggtcgagcacaggctatcac
agtgatgatgaggattcttttgacatcgcccacaacatgcgggagctggaactgactctg
caaggggagttggaagaagacgatgggaaaatgtggccacacgtcgatgaagccaacaag
taa

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