Homalodisca vitripennis (glassy-winged sharpshooter): 124364990
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Entry
124364990 CDS
T09217
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
hvi
Homalodisca vitripennis (glassy-winged sharpshooter)
Brite
KEGG Orthology (KO) [BR:
hvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hvi03041
]
124364990
Enzymes [BR:
hvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
124364990
Spliceosome [BR:
hvi03041
]
Complex C
Other components
Complex C specific factors
124364990
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_N
HA2_C
DEAD
AAA_22
nSTAND3
AAA_19
ABC_tran
AAA_7
Crinivirus_P26
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
124364990
NCBI-ProteinID:
XP_046676818
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All DBs
Position
6:complement(146538425..146569782)
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AA seq
691 aa
AA seq
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MKTAKPIFLRPGDSSSWEEDKSDVEALSGTRFVYNPNISLALDHQRRKLPIFQNRNHILY
LLEEYQTLVLVGDTGCGKSTQIPQYLVEAGWCEGEKMVGVTEPRRVAATTLATRVADENG
TMLGQTVGYSIRFDNCCQHGVTKIKYMTEGILMREMMADPLLRSYSVIMLDEVHERTLFT
DILMGLLKKILRKQKKLRLIVTSATMDAEHLCNFFNQSTEKDKKSAVIMSVEGKLHPVQV
HFLKDPVPDYVTSTVDTAVKIHKYEPPGDVLCFLTGQEEVDRTVSLLRDHASSNPRRDLE
LVALPMYGSLPNADQLRVFQSTPKGQRKVVVATNIAETSVTIPGIVYVVDCGFVKMQWYN
VSTSSDSLVLVPVSKASAEQRAGRAGRVRPGKVYRLYCEKDYTTLHNATPPEMQRMELSG
AVLQLKALGIDNVLRFAFPSPPPARHLASALELLHGLGAIDNSGALTSPLGLHMAEFPLP
PLHSKALLVSGEFGCSEEMASILSLLQVQSVFTKPGGGAAAVKARVERRKFEVAEGDLLT
MLNVYTAYRSSVARQESSSRAWCHKHFINHKAMKRVSEIRTHMLSLLEKLGVPAVSSNGD
SGKVRRCITAGFFPNAAYLHHSGVYKTLRGDMVLHVHPTSVLYTLEQPQWVLFCEILQTD
RTYMRELTVIEPEWLEELAPHFYQKSFENER
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgaagacggctaaaccaatttttcttagaccaggtgattcctcgagttgggaagaggac
aagtcggatgtggaagctttgtctggaaccagatttgtgtataacccaaacatttctctg
gcgttggatcaccaacgacggaaactgccaatttttcaaaaccgtaaccatatattgtat
ttgctggaagaatatcaaactttagttctggttggggacacaggttgcggaaaaagcaca
caaattccacaatacctggttgaagctggttggtgcgagggagagaagatggtgggtgtg
acggaaccgagacgggtagcagccactactcttgccactagagtcgcagatgagaatggt
acgatgctgggtcaaactgtggggtacagcatccgcttcgacaactgctgtcagcatggt
gtcaccaagataaagtacatgactgaggggatcctcatgagagagatgatggcagacccc
ctgctacgcagctactctgtcatcatgctggatgaagttcatgagaggactctcttcact
gacatcctcatggggcttctcaagaaaatcctcaggaaacagaagaagttgcgactaatt
gttacatcagcaacaatggatgcagaacatctatgtaacttcttcaaccagagcacagag
aaagataagaaatcagctgttataatgagtgttgaaggcaaactacatccagtacaggtc
catttcctgaaagatccagtgccagactatgtgactagcacagtggatacagctgtcaaa
atacataagtatgaaccacctggggatgtattgtgcttcttgacaggtcaagaggaagtt
gatcggacagtgagcctgttgagagaccacgcttcttccaaccctcgcagggacttagag
ttggtggcattgccgatgtacggttcattgcctaatgcagaccagctccgagtgttccag
agtactcctaaaggtcagcgcaaggttgtggtcgccaccaatatagcagagacctcagtc
accatccccggcattgtctatgtggtggactgtgggtttgtcaaaatgcaatggtacaac
gtgagcacgtccagtgacagtttggtgttggtgccggtttccaaagcctctgcagagcag
agggctggacgtgcaggtagagtcaggccgggtaaggtttacagactttactgtgagaaa
gactacaccactctacacaacgcgacgcctcccgagatgcagcgaatggaactgtcaggg
gcagtgttgcagctgaaggcactcggtatagacaacgttctgaggttcgcattcccctcg
ccgccaccagcccgccacctcgcctctgctttagaactgctgcacggtctcggtgcgata
gataacagcggggctctcacctcgcccctcggtctgcacatggcagagttccctctccct
ccactgcacagcaaggctcttcttgtctctggagaatttggatgttccgaggagatggcc
agtatcctgtccctgttgcaggtgcagagtgtgttcaccaagccaggtggtggtgccgcg
gcagttaaagctcgtgtggagagacgcaagtttgaggtagcagagggtgacctgcttacg
atgctgaacgtgtacacagcgtataggagtagtgtagcgcgacaggaaagctccagccgg
gcctggtgtcacaaacacttcatcaaccacaaggccatgaagagagtctccgagatacgg
acacacatgttgagcctgctggaaaagcttggtgttcctgccgtatcttctaatggagac
agcggtaaagtgcgccgatgcatcactgccggattcttcccgaacgcagcgtacctgcac
cactccggagtgtacaagactctgcgtggggatatggtgctacatgtgcatcccacatct
gtgctctacaccctcgagcagccacaatgggtgctgttctgtgagattctccagactgat
cggacctacatgagggagttgaccgttatcgagccagagtggttggaagagcttgcccct
catttttaccaaaaatcatttgaaaatgagagatag
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