Homalodisca vitripennis (glassy-winged sharpshooter): 124365902
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Entry
124365902 CDS
T09217
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
hvi
Homalodisca vitripennis (glassy-winged sharpshooter)
Pathway
hvi03022
Basal transcription factors
hvi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hvi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124365902
09124 Replication and repair
03420 Nucleotide excision repair
124365902
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hvi03021
]
124365902
03400 DNA repair and recombination proteins [BR:
hvi03400
]
124365902
Enzymes [BR:
hvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
124365902
Transcription machinery [BR:
hvi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
124365902
DNA repair and recombination proteins [BR:
hvi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
124365902
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_34
CSTF_C
SWI2_SNF2
TniB
Terminase_5
Motif
Other DBs
NCBI-GeneID:
124365902
NCBI-ProteinID:
XP_046677976
LinkDB
All DBs
Position
7:complement(60675137..60720009)
Genome browser
AA seq
793 aa
AA seq
DB search
MAGPKRNKKDTDRKWKKRKKDEEEDSNNIDDPGEGNDEDGVPGAAKKNAEAADQGVKEDE
FGAKDYRGQMSLKSDHASRPLWVAPNGHIFLESFSPVYKHAHDFLIAISEPVCRPEHIHE
YKLTAYSLYAAVSVGLETHDIVEYIKRLSKTTVPDGIVEFIKLCTLSYGKVKLVLKHNKY
FVESPFPEVLQKLLKDPVIQECRLRRAVDKEKETTLIPQVLENKGLPLFRSSQPVQTELP
PPTDDEIKEVVPEDITDFYDKMDKADEDDDEEANLKTVSFEVNQEKIEVIQKRCIELEHP
LLAEYDFRNDTVNPDINIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVG
VTACCTVRKRALVLCNSGVSVEQWKQQFKMWSTADDSMICRFTSEAKDKPMGCGILVTTY
SMITHTQKRSWEADQTMKWLQEQEWGIMVLDEVHTIPAKMFRRVLTIVQSHCKLGLTATL
LREDDKIADLNFLIGPKLYEANWLELQKKGFIARVQCAEVWCPMTPEFYREYLLCRTSKK
LLLYVMNPNKFRACQFLIRYHERRGDKTIVFSDNVFALKHYAIKMNKPYIYGPTSQSERI
QILQNFKFNPKVNTIFVSKVADTSFDLPEANVLIQISSHGGSRRQEAQRLGRILRAKKGA
IAEEYNAFFYTLVSQDTMEMGYSRKRQRFLVNQGYSYKVITKLAGMDEEPDMMYKTRDEQ
AQLLQQVLAASETDADEERIPGEGGGARAGPSGANRRQGSLSSMSGADDAVYMEYRRQYL
ANIKHPLFKKFRG
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggcagggccaaaaagaaacaaaaaagacacagatcgtaaatggaaaaaaaggaagaag
gatgaagaggaggattcaaacaatatagatgatcctggtgaaggaaacgatgaagatgga
gtgcctggagctgcaaagaagaacgcagaggcagctgatcagggagttaaggaggatgag
tttggagccaaagactacaggggtcaaatgtccttaaagtccgatcatgcttcccggccg
ctgtgggttgctccaaatggacacatatttctcgagtcgttctcacctgtgtacaagcat
gctcatgacttcctcatcgccatatctgaacctgtttgccgtcctgaacacatccacgaa
tacaagctgactgcctactctctatatgcagctgtcagtgtggggctagagactcatgac
atcgttgagtacatcaagcggctgagtaagaccactgtaccggacggcatcgttgagttc
atcaaattgtgtactctttcttacggcaaggtgaaactagtcctgaagcacaacaagtat
tttgtggaatctccattcccagaggtactccagaagctcctcaaggatcctgtgatacag
gagtgtcgtctgcggcgggccgtggataaggagaaggaaacaacactcattcctcaagtt
ctggagaacaaggggttacctctgttccgaagtagccagccagtacagacagaacttccg
cccccaacggatgatgagatcaaagaggtggtccctgaagatataactgatttctacgac
aagatggacaaggcggatgaagacgatgatgaagaagctaacctgaagacagtgtctttt
gaagtcaatcaggaaaaaatagaagtcatacagaagcgatgcatagagttggaacatcca
ctactagcggagtatgactttcgcaatgacactgtcaatcctgacattaatattgacctg
aaaccatcagctgtgctgaggccgtaccaggaaaaaagtctcaggaaaatgtttggcaac
ggtcgagctcgttctggtgtcattgttctgccctgcggagcgggtaaaagtctggtgggt
gtgacggcatgttgtaccgtgcgcaaacgcgctctagtcctgtgtaactccggtgtctca
gtggaacaatggaaacaacaattcaaaatgtggtccacagcggacgacagcatgatctgc
cggttcacgtcagaggccaaggacaagccgatgggctgtgggatcctggtaactacttat
tccatgattacccatacacagaaaagatcgtgggaagcggatcagaccatgaagtggctg
caggagcaggagtggggcatcatggtgcttgatgaggtacatacgatcccagccaagatg
ttccgtcgtgttctcaccatcgtgcagtctcattgcaagcttggtctcactgccacgctg
ctgcgagaggacgacaagatcgcagatctcaacttcctcattggtcccaagctgtatgag
gccaactggttggagttgcagaagaaagggtttattgcacgtgtccagtgtgcggaggtc
tggtgtcccatgacgcctgaattttaccgggaatatcttctctgtcggaccagtaaaaaa
ttgctcctatatgtgatgaatcccaacaagttccgagcatgtcagttcctgattcgctac
cacgaaagacgaggagacaaaacaattgtgttttctgacaacgtgtttgctctcaaacac
tatgccatcaagatgaataagccctacatctatggcccgacctcacagagtgagagaatt
cagattctgcaaaacttcaagtttaacccaaaagtgaacacgatttttgtgagtaaagtg
gctgacacttcgtttgatctgccagaggctaacgtgttgatccagatttcctcgcatggc
ggctctcgaagacaagaggcccaacgactcggtcgaattcttcgagctaaaaaaggtgcg
attgcggaggaatacaatgcctttttctacactctggtgtcacaggacaccatggaaatg
ggatattcacgcaagagacagcggtttctagtcaaccaaggctacagctacaaggtcatt
accaagcttgctggcatggacgaggagccagacatgatgtacaagacgagagatgagcag
gctcaactgctgcaacaagtcttggctgccagtgagacagatgcagatgaggagaggatc
ccaggtgagggaggcggagctcgtgctggaccatccggtgcaaaccgacgccaaggcagt
ctatcatctatgtccggtgctgacgatgcagtgtacatggaataccggcgccaatacctt
gccaacatcaagcatcccttgtttaagaagttccgaggctaa
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