Homalodisca vitripennis (glassy-winged sharpshooter): 124366272
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Entry
124366272 CDS
T09217
Name
(RefSeq) transcription elongation factor SPT5
KO
K15172
transcription elongation factor SPT5
Organism
hvi
Homalodisca vitripennis (glassy-winged sharpshooter)
Pathway
hvi03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
hvi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
124366272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hvi03021
]
124366272
03019 Messenger RNA biogenesis [BR:
hvi03019
]
124366272
Transcription machinery [BR:
hvi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
124366272
RNA polymerase I system
124366272
Messenger RNA biogenesis [BR:
hvi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
124366272
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KOW4_SPT5
KOW6_SPT5
KOW
Spt5-NGN
KOW5_SPT5
KOW7_SPT5
KOW2_Spt5
KOWx_SPT5
Spt5_N
KOW1_SPT5
CTD
GPKOW_C
DUF3912
CoV_nucleocap
Motif
Other DBs
NCBI-GeneID:
124366272
NCBI-ProteinID:
XP_046678637
LinkDB
All DBs
Position
1:89135362..89186893
Genome browser
AA seq
1123 aa
AA seq
DB search
MSDAEDFDSEAGSEAGSGSYQGSEPGSPRGSEPGSPPASNRGSDVGSARGSDSEPEDVEV
RSRSVSRSRSRSRSRSGSRSRSASRSRSRSRSRSRSPSGSEAEEVNRNKSGSEVEDEEEP
EGEDLNSEDEYDEEEDEDDDRPRKKKKKNDRFGGFIIDEAEVDDEVEEDDDWEDGAQEIG
IVANEMEELGPTAREIEGRRRGNTLWDSQKEDEIEEYLRKKYADESGAARHFGDGGEDMS
DEITQQTLLPGVKDPNLWMVRCRIGEEKNTALLLMRKFITYQNSEDPLQIKSVVAPEGVK
GYIYIEAYKQPHVKQAIDNVGNLRMGIWKQQMVPIKEMIDVLRVVKVQTGLRPKQWVRLK
RGLYKDDIAQVDYVDLAQNQVHLKLLPRVDYTRPRGALRNNQTENEANKRKKKRRPPAKP
FDPEAIRAIGGEVTSDGDFLIFEGNRYSRKGFLYKNFTMSAIIADGVKPTLSELEKFEEA
PEGIDIELPTGGKDDGPGHSFSAGDNVEVCQGELMNLQGKILAIDGQLITILPKHEDLHE
PLEFQATELRKLFRTGDHVKVLAGRYEGETGLIVRVEDNRVVLFSDLTMHELEVLPRDLQ
LCSDMATGVDSLGQFQWGDLVQLDPQNVGVIVRLERENFHVLSMQGKVVEAKPQALHKKK
EVRNTLSLDSEQNTIQKRDIVNVIDGPHSGRDGEIKHLYRNFAFLYSRMYLDNGGIFVCK
TRHLHLAGGSKNQNNAGLMPGFMSPRISSPMHPSGGGGGGGGAGAGAGRGRGRGGGNVRR
DRDLIGQIIKITRGPYKGNVGMVKDATESTARVELHSSCQTISVDRSHIATVGMPNKDGS
ISSYNRTPGYGGAATPMYGRDGSKTPMHGSQTPLYEAGSRTPHYGSMTPSHDGSRTPGAW
DPSITNTPARSDADNYSLDEFGAHPSNGPYTPQTPGGMYGSDQSYSPYQGSPSPTGYHSG
SSAYVPTPSPSSAVNVGAYGTPSPMSYSPLTPGGAPSPYNSHSTGMDPMMQDWHTTDIEV
RVRESHDDNDLVGQVGTIRSISGGMCSVFLPDEDRTVSISCEQLEPVIPAWPNPVKVILG
EDKERTGDLLSIDNQEGVVKLDGDDVKMLQLRYLCKYNRPGQD
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatgcagaggactttgatagcgaggcagggagtgaagcaggttctgggagctat
caaggcagtgagccaggcagtccaagaggtagtgaacctgggagtccgccagccagtaat
cgtggtagtgatgtaggaagtgctcgaggcagtgattctgaaccagaggatgtagaggtc
cgtagtcgcagtgtgagtcgaagcagaagtagaagtcgcagccgcagtggaagtcgaagc
agaagtgcaagccgttcccgcagtagatctcgtagtcgaagtagaagccccagtggatct
gaagctgaagaagtcaacaggaacaaatcaggaagtgaagttgaggatgaagaagaacca
gagggcgaagacctcaattctgaagatgagtacgacgaggaagaagatgaggatgatgac
agaccgcgcaagaagaagaagaagaatgacagatttggggggttcatcattgatgaagca
gaagtggacgatgaggtagaggaagatgatgactgggaggatggagcacaagaaattggc
attgtcgcaaatgagatggaggagctcgggccgaccgctcgtgagatagaaggtcggagg
agaggcaataccttatgggattctcaaaaggaagatgagatagaggaatatttgcgaaag
aagtatgcagatgagtctggtgctgctcgtcactttggagatgggggtgaagacatgtct
gatgaaattactcagcagacccttcttccaggagtcaaggacccaaatctatggatggtt
cgttgtcgtattggagaggagaaaaacactgctctcttgctgatgcgtaagtttattacc
tatcaaaactctgaggatcctctacagatcaagagtgtggtggctccagaaggtgtcaaa
ggctacatatatatagaagcatacaagcaaccacatgtcaaacaggccatagacaatgtc
ggtaatctgcggatgggcatctggaaacaacagatggtgcctattaaggagatgatagat
gttttaagagtggtgaaggtgcagaccggtttaaggcccaaacagtgggtcaggcttaaa
agaggattgtacaaagatgacattgctcaagtggactatgtggacttggcccagaaccag
gttcatctgaaactgctgccccgtgtggattacacacggcccagaggagctctccgtaat
aaccagactgaaaatgaggcaaacaagcggaagaagaagaggcgacctccggcaaaacca
tttgaccctgaggctattcgagctattggaggtgaagtgacgagtgatggagactttttg
atctttgagggtaatcgatacagccgaaagggcttcctatacaagaacttcacaatgagt
gccatcatagcagatggagttaaacctacactttctgaattggaaaagtttgaggaggct
cctgagggtatcgacatcgagctgccgacaggaggcaaagacgatggtccaggccattcc
tttagtgctggagacaacgtggaagtgtgtcagggagagttgatgaacctgcagggtaag
attctcgctatcgacggacaactgatcaccatcctcccaaagcacgaggacctccatgag
cctctagagttccaggcaacagagttacgtaagttgttccgaacaggagaccacgtcaag
gtgttggccggccgctatgaaggtgagaccggactgatagtgcgtgttgaggacaaccgt
gtagtgctgttctctgatctcactatgcatgagctagaggtcctgccacgtgacttgcag
ctgtgctcagacatggccaccggtgtggatagcctcggccagttccagtggggtgacctt
gtacagctcgatccacaaaacgtgggagtcatcgtgagactggagagagagaacttccac
gtgctcagtatgcaaggcaaggtggtggaggctaaaccgcaggctctgcataagaagaag
gaagtcaggaacactctatctttggactctgaacagaataccattcagaaacgagatatt
gtcaatgtcattgatggaccacattccggcagagatggagagataaagcatctgtaccgc
aactttgctttcttatattcccgcatgtatttggataatggaggcatattcgtgtgcaag
actcgccatcttcatctcgctggtggttctaaaaatcagaacaatgctggcttgatgcca
gggttcatgtctccacgcatctcatctccaatgcaccccagtggtggaggtggaggtgga
ggaggtgcaggtgcaggtgcaggtagaggtcgtggcaggggaggaggaaatgtgcgacga
gacagagatctcatcggccagatcatcaagatcactcgcggaccttataaaggtaatgtg
ggaatggtaaaggatgctacagagtccacagcaagagtcgagctgcactcctcgtgtcag
acaatatctgtcgacagatctcacattgcaactgtcggaatgccaaacaaggacggatcc
atttccagttacaaccgcacaccaggctatggaggtgctgccactcctatgtatggcagg
gatggcagcaagacacctatgcatggatcacagacacctctatacgaagctggttcgcgc
acaccacactatggtagcatgacacctagccatgacggttcacgtacacctggagcttgg
gatccgtcaatcaccaacactcctgcccgatccgatgctgacaattactcactggatgag
tttggagcgcacccctccaatgggccctacactcctcagactcctggtggcatgtacggc
tcagatcagagctactctccctaccaaggatccccttcaccaactggataccacagtggc
agttctgcgtatgtgcctactccgagcccgagcagtgccgtgaacgttggagcctacggc
accccctcgcctatgagctatagtcccctgactcccggaggagccccctctccctacaac
tcgcactccacaggcatggacccaatgatgcaagattggcatacaacggacattgaggtt
cgagtaagggagagtcatgatgataatgatcttgttggccaagtcggcaccatccgcagc
atatctggtggcatgtgttcggtgttcctaccagatgaggaccgtactgtcagtatcagt
tgtgaacagctagagccagtaataccggcatggccaaaccctgtgaaagtgatcttaggg
gaggacaaggagcgaactggtgacttgctgtccatagacaaccaggagggggtggtcaag
ctggacggagacgatgtcaagatgctccaactgcgttacttgtgtaaatacaacagaccc
ggtcaagactag
DBGET
integrated database retrieval system
