Homalodisca vitripennis (glassy-winged sharpshooter): 124367918
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Entry
124367918 CDS
T09217
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase alpha catalytic subunit
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
hvi
Homalodisca vitripennis (glassy-winged sharpshooter)
Pathway
hvi03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
hvi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
124367918
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hvi03032
]
124367918
Enzymes [BR:
hvi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
124367918
DNA replication proteins [BR:
hvi03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
124367918
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
DUF1744
PP2
DUF2153
Motif
Other DBs
NCBI-GeneID:
124367918
NCBI-ProteinID:
XP_046681080
LinkDB
All DBs
Position
8:complement(113247656..113310588)
Genome browser
AA seq
1478 aa
AA seq
DB search
MDDSSMSGGRSRRQKADKASKFEKLKQLKGSKHKYEIQEVENVYEEVDEDTYAERVLERQ
EDDWIVDDDGAGYVEDGREIFDDDLDDDSLSRSKKTEGQGRKRGRPKTEKPEVARPAGGN
IRSMFANMPAKRRKESAVKLEDDDILGDLIQEIDSTPSSDRRGTPLSVKQEVTSRDYLKS
FSTVTPRPKPVKASLVPKPIITPKPVVLKRKVEAENDHNGCDDVPVIEEDFSQDVIPSSE
TMETDEFHVEIKKEPEDVKPMIEDFDSNDGFSEMAFQQVDKVIEEFESQVTEPQVKVKQE
VMEEVKDSKTEMEEKLLSGALWDEVESSAGGGESASTVNVDLSQLPLTTNDKGEKVFRFF
YWDAYEDVFKQPGVVYLFGKVFVASADTYVSCCVVMRNIERTIFLLPREEFVDLSSGNST
GRPVTLNDVYDEFNSKIAVKYKINPFRSRPVLKNYAFEIDNVPKSCEYVEVKYSPSMAQL
PKDLKGETIAHVFGTNSSFLELLLLQRKIKGPCWLDLIDPAPATNPVSFCKVEVLGGHIH
NLSVCGGGSLPPPPPLVVASLSLRTALHPRTSQTEIVLASVVVHNSYSVDKQVGKQLFHQ
HFCALTRPSDAMFPVDLRDRLRSEGRLHVERCDSERALLCYLLAKLSKLDPDLVVGHGLL
GGDLDVLVHRLAHLKIPNWSRIGRLKRANIPPPGKARFQVERYPMCGRLVCDVKLSAKEL
IRARSYELGTLCQSVLHVNVERLEVTPDEVKAKYSSSSSLVELVRATMVDSVYVLRLMYE
LNVIPLALQITNIAGNVMSRTLMGGRAERNEFLLLHAFTEKDYIVPDKQYGKKPIKHMDM
EELLVEGVPNKKGGRKKPAYSGGLVLDPKVGFYDKLILLMDFNSLYPSIIHEYNICFTTV
RKIIMISNEGEVVSAEPPDTDEELGILPTEIRKLVESRRDVKKMMKASGLPADLKLQYDI
RQMALKLTANSMYGCLGFSNSRFYAKPLAALITAKGREILMNTKDLVQKLSYEVIYGDTD
SIMINTNILEYEQVFKIGNKIKAEVNKMYKHVELDIDGVFKYMLLLKKKKYAAVSVTKLP
NGELVCSQEVKGLDMVRRDWSQLAAEAGRFVLTQILSDLEPDERIQNIHAQLTKVGNDLR
EGKVPLSLMTITKQLTKAPDEYSDKKSQPHVQVALRLNAKGARLKGGDTVHYVICEDGTS
NPATQRAYHVDELKTSDTLRLDVKYYLSQQIHPVVSRLIEPVEGTDSAQVAECLGLDPTQ
FKEKPKPTDDFGAGEAILLKDTERFKNCDKFVFKCVNPECCCEIAVEGPVRKTDTSSQTQ
LVLERCSNPECKVQPLQYLADIRNSLTLAMRSYIVKYYQGWLICEDPGCPQRTRRLPLHF
ENKYPVCTHCGKNNMYREYSEKQLYTQLSYFQHVFDINKPPYSEMSINIDTFNAYCALKE
HVARTLACSGYSVISLTKLFSGLFPEPIKIKKEPVDDR
NT seq
4437 nt
NT seq
+upstream
nt +downstream
nt
atggatgattcttcaatgtcaggaggccggtcgagacgccaaaaagctgataaggcctca
aagtttgagaagctgaagcagctgaaagggagtaaacacaagtacgagattcaggaagtt
gagaacgtctacgaggaggttgatgaggacacatatgctgaaagagttctcgaaaggcaa
gaagacgattggattgttgatgatgatggtgcgggatatgtggaagatggacgggagatt
ttcgacgatgatctcgatgatgactcgctctcccgtagcaagaagacagagggtcaagga
aggaagcgtggccgacccaaaacagagaagcctgaggtggcgaggcctgccggtggcaac
atcaggagcatgttcgccaacatgcctgccaaacggaggaaagagtcggcagtgaagcta
gaagatgatgatatcctgggagatctgatccaagaaatagactcaactcccagcagtgat
cgtaggggaacccccttgagtgtgaagcaagaagtcacttccagggactacctgaagtcg
ttttcaacagtgacccctaggcctaagccagtgaaagcctcgctggttcctaaaccaatc
atcactccgaaaccagttgtcctaaaacgcaaggttgaggctgagaacgatcacaatggt
tgcgatgatgtcccagtgattgaggaggacttttcacaggatgtgatcccatcatcagaa
actatggagacagatgaatttcatgttgagattaaaaaagagcctgaggatgtaaaacca
atgattgaagatttcgactccaatgatgggttctcagaaatggcttttcaacaggtggat
aaagtgattgaagagtttgagtcacaagtaacggaaccacaagtcaaagtgaagcaagag
gttatggaagaagttaaggacagtaaaacagagatggaggagaagctactcagtggggca
ttgtgggatgaggtagagagctcggctggtggcggggaatcggcttccactgtcaacgtg
gatctttcccagttacctctgaccactaacgataaaggagagaaggtgttcagattcttc
tactgggatgcgtacgaggatgttttcaagcagccaggagtggtttacctattcgggaaa
gtatttgtagcatcggccgatacctacgttagttgctgtgtagtgatgcgcaacatcgag
cgcaccattttcctgttgcccagggaagagtttgttgatcttagctctgggaattctacg
ggacggccagtaacactcaacgacgtttacgacgagttcaattcgaaaatcgctgtgaag
tacaagataaatccgttcagatcccgacctgtcctgaagaactatgcttttgagatagac
aatgtgcctaaatcttgtgaatatgtagaggtgaaatactcgcccagtatggcccagctg
ccaaaagacttaaagggagaaacgattgctcacgtttttggcacaaactcctctttcctc
gagttgctcttactgcagcggaagatcaaaggaccttgctggctggatctgatcgaccct
gcccctgctaccaaccctgttagtttctgcaaagtcgaggtattaggtggtcatatccac
aacctgtcggtgtgtggtggaggatccctccctccacctcctccactggtggtggcctcc
ctctctctccgcacggcgcttcatccccgcactagtcagacggagatagtgctggccagc
gtggtggtacacaacagttacagtgtggacaagcaagtgggcaaacagctgttccaccaa
catttctgtgcgttgacgaggccgtcggatgcgatgttcccggtggacctgcgcgaccgg
ctgcgcagtgagggacgtctccacgtagaacgctgtgacagcgaacgcgccctgctgtgt
tacctgctggccaagctcagcaagctggacccggacttggtggtgggtcacgggctactg
gggggagacctggatgttcttgtacaccggctggcgcatctcaagatccccaactggtcg
aggatcggacggcttaagcgagccaatatcccacctccagggaaggcacgattccaagta
gagagatatccaatgtgcggacgactcgtttgtgacgtaaaactctcggctaaggagctc
atcagagccaggagctacgagctgggcaccctctgtcagtctgtgttacatgtgaatgta
gagaggctggaagtgaccccagacgaggtgaaagccaagtacagctccagcagtagtcta
gtggagctggttagagcgacaatggtagactctgtgtacgtgctgcgactcatgtatgag
ctgaacgtcatccctctggcactgcagatcaccaacattgcgggaaatgtgatgtcccgg
actctgatgggtggaagagcggaaagaaacgagttcctgttgctgcacgctttcacggag
aaggactacatcgtgcctgacaagcagtatggcaagaagccaataaagcacatggacatg
gaggagctgttggtggagggagtacccaacaagaagggaggacgtaagaaaccagcatac
tccggaggtctggtgttggaccccaaagttggcttctacgacaagctgatcctgctgatg
gactttaactcactgtacccgagcatcatccatgagtacaacatctgcttcactacagtg
aggaagatcatcatgataagtaatgagggggaggtggtgtcggcagaacctccggacaca
gacgaggagttgggtatcttgcccactgaaatccggaagctggtggagagtcgaagggat
gttaagaaaatgatgaaggcctccggtcttcctgcagatctcaaattacagtatgatatt
agacagatggccttgaaactgacggctaacagcatgtatgggtgtctgggcttctccaac
tcacggttctacgctaaacctcttgcagctcttatcacagctaaaggcagagagatactg
atgaacacaaaggatcttgtgcagaaattgagctacgaagtgatctacggagacactgac
tctatcatgatcaacaccaacattctggagtatgagcaggtcttcaagatcggcaacaag
atcaaagcggaggtgaacaagatgtacaagcacgtggagctggacattgacggtgtgttc
aagtacatgctgctgttgaagaagaagaagtacgcagcggtctcggtgacaaagttaccc
aatggggagctggtgtgctctcaggaggtcaaagggctggacatggtgagacgagactgg
tcacaactagccgcagaggccggcaggtttgtactgactcagattctgtctgatctggag
ccagatgaacgtatccagaatatccatgctcagctgacgaaggtgggcaacgacctgagg
gagggcaaggttcctctgtcgcttatgaccatcaccaaacagctgaccaaggctcccgac
gagtactcggacaagaagagtcaaccacatgttcaggtggccttgagactgaatgcgaaa
ggagcgagactgaagggcggagacactgtgcactacgtgatctgcgaggacggcaccagc
aacccagccactcaacgagcctaccatgtggacgagctgaagacatcagacaccctccga
ctggacgtcaagtactacctgagccagcagatacaccccgtggtcagtcggctgatagag
ccggtagaaggcacagacagcgcgcaggtcgccgaatgtcttggccttgatccaactcag
ttcaaagagaagccaaagccaaccgacgatttcggagcgggtgaagccattcttctgaaa
gacacagaaaggttcaagaattgtgataaatttgtattcaagtgtgtgaatcctgagtgc
tgttgtgagattgcggtcgaaggtccggtcagaaaaactgacacgagcagtcagacacag
ttggtgttggagagatgttccaacccggagtgtaaggtgcagcctctccagtacttggct
gacatacgcaactccctcacgctggccatgaggtcgtacatcgtcaagtactatcagggg
tggctgatatgtgaggatcctggctgcccccagagaactcgcagactccccctccacttt
gagaacaagtatccagtctgtacccactgcggcaagaacaacatgtaccgggagtactcg
gagaagcagttgtacacccagctgagttatttccagcacgtgtttgacatcaacaagccg
ccctacagtgaaatgagcataaacatagacactttcaatgcgtactgtgcgctcaaggaa
cacgtggcacgcacgttggcgtgcagcggctattcagtcatcagtctcaccaagctcttc
agtggactcttcccagaaccgatcaaaataaagaaagaaccggtggatgaccgatga
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integrated database retrieval system
