Homalodisca vitripennis (glassy-winged sharpshooter): 124367994
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Entry
124367994 CDS
T09217
Name
(RefSeq) replication factor C subunit 5-like
KO
K10756
replication factor C subunit 3/5
Organism
hvi
Homalodisca vitripennis (glassy-winged sharpshooter)
Pathway
hvi03030
DNA replication
hvi03410
Base excision repair
hvi03420
Nucleotide excision repair
hvi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hvi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
124367994
03410 Base excision repair
124367994
03420 Nucleotide excision repair
124367994
03430 Mismatch repair
124367994
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hvi03032
]
124367994
03036 Chromosome and associated proteins [BR:
hvi03036
]
124367994
03400 DNA repair and recombination proteins [BR:
hvi03400
]
124367994
DNA replication proteins [BR:
hvi03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
124367994
DNA Replication Termination Factors
ELG1-RFC complex
124367994
Chromosome and associated proteins [BR:
hvi03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
124367994
DNA repair and recombination proteins [BR:
hvi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
124367994
Check point factors
HRAD17(Rad24)-RFC complex
124367994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_lid_RFC1
AAA_assoc_2
AAA_22
AAA_11
RCF1-5-like_lid
RuvB_N
AAA_14
ResIII
DEAD
AAA_16
DUF815
AAA_24
AAA_7
AAA_30
AAA_5
PhoH
AAA_19
Thioredoxin_6
nSTAND_NTPase5
Mg_chelatase
TIP49
DNAX_ATPase_lid
BrkDBD
HTH_TbsP_C
Glyco_hydro_57
ATPase_2
bpMoxR
Motif
Other DBs
NCBI-GeneID:
124367994
NCBI-ProteinID:
XP_046681215
LinkDB
All DBs
Position
8:119631240..119684542
Genome browser
AA seq
338 aa
AA seq
DB search
MSQTSKKDQKVNLPWVEKYRPSTLEDLISHEDIIRTINHFIKEDQLPHLLFYGPPGTGKT
STILACAKQLYSPNQFSSMVLELNASDDRGIGIVRGQILNFASTRTIFKSGFKLIILDEA
DAMTNDAQNALRRIIEKFTDNVRFCLICNYLSKIIPALQSRCTRFRFGPLATEQILPRLD
YVVEQENVKITDDGKKALVDLAQGDMRKVLNILQSAATAFSEVNEVTVYTCVGHPLKSDI
MDIVRWLLNLDFSTTYKNIQNLKVVKGIALQDILSEVHLFLHRVELPSEVLTELLIKLAD
IEYRLTSGTPENLQLSALVGAFHLARTRIELTEDIATY
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaaacatcgaaaaaggaccagaaagtgaatttgccatgggtcgagaaatatcgt
cccagtacactagaagatttaatatcacatgaagacatcatacgaacgataaaccacttc
atcaaagaggaccaattgccgcatctactgttctacggtccacccggaaccggcaagacc
agcaccatacttgcttgtgcaaaacagctctactcgccaaaccagttcagctccatggtc
ttggagctaaacgcgtctgatgacagaggtattggaattgttcggggacagatactcaac
tttgctagcactcgcacgatcttcaagtctggattcaagctgatcattctggatgaagct
gacgcgatgacaaatgatgcccaaaacgccttgaggagaatcatagagaagttcacggat
aatgtgcggttctgtttgatctgcaactacctcagcaaaatcattccggcgttgcagtct
cgatgtactcggttccggtttggtccactcgctaccgagcagatcctcccccgactagac
tacgttgtggaacaagagaatgttaaaataacagatgatggaaagaaagcattagtggat
ttggcccaaggagacatgagaaaggtactgaacattctacagagtgcagcaacggctttc
tccgaggtcaatgaagtgacggtctacacctgcgtgggtcacccactcaagtctgacatc
atggacattgtcagatggctcctcaacctagacttttccaccacctacaaaaatatccag
aacttgaaagtagtgaaaggtattgcccttcaagatatattgtcagaagttcatcttttc
ttacatagagttgaattaccgtcggaagttctgaccgagctgctgatcaagctggcagac
atagagtacagactgacttctgggacgccagagaacctccagctgagtgctttagttggc
gcgtttcatcttgcacggactcgtatagaattgacagaggacatcgctacttattga
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