Homalodisca vitripennis (glassy-winged sharpshooter): 124368221
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Entry
124368221 CDS
T09217
Name
(RefSeq) exosome complex component RRP41
KO
K11600
exosome complex component RRP41
Organism
hvi
Homalodisca vitripennis (glassy-winged sharpshooter)
Pathway
hvi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hvi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124368221
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hvi03019
]
124368221
Messenger RNA biogenesis [BR:
hvi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
124368221
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
124368221
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
124368221
NCBI-ProteinID:
XP_046681456
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All DBs
Position
1:complement(103193586..103219309)
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AA seq
266 aa
AA seq
DB search
MDLLSDQGLRLDGRRANELRKIRCKLGVFEQPDGSAYLEQGNTKVLAAVYGPHQVRGRGQ
KAIHDAVLVNCQYSMATFSTGERKRRPRGDRKSQEMTMHLRQALTAAIRTELYPRSQIDI
FLEVLQADGGNYCACVNAATLALIDAGIPIREFVVACTASLAGGDNCMPLVDISHLEETS
GGSNLTVAAMPISGQVVLMDMSQRFHLDHLKKVMDCAMQGCRDVYEILDRALREYLTEVG
SSSAWGSVDISTQRILQVVEPNTEDT
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atggatctgttgtccgaccaaggattaaggctggatggaaggagggccaatgaattgcgg
aaaattaggtgtaaattaggagtatttgaacagccagatggcagtgcttatttagaacaa
ggaaatacaaaagttttagctgctgtatacgggccacaccaggtaagaggaagaggtcag
aaggcgattcacgatgctgtgctagtcaactgtcagtacagcatggccacattcagcact
ggggagaggaagcggcgaccacgtggggatcgcaaatctcaggaaatgaccatgcacttg
aggcaagcccttactgcagcaattcgtactgaactctacccaagatcacagatagacatc
tttctagaggtgctacaagcagatggcggtaactattgtgcatgtgtcaatgctgccacc
ttggctctaatagatgcagggataccaatacgagagtttgtggtcgcttgtacagcatcg
ctcgctggtggagacaactgcatgccgctggtagacatcagtcacctggaggaaacttcc
ggaggttctaacctcaccgtggctgccatgcccatatctggccaggtagtgctgatggac
atgtcccagcgatttcatctggatcacctcaagaaggtgatggattgtgcaatgcagggc
tgccgggacgtctatgaaatcctagaccgtgcattacgcgagtatctgacagaggtgggc
agttcatcagcctggggttctgttgacatcagcactcagcgtatcctacaggttgtggaa
cccaacaccgaggacacgtag
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