Homalodisca vitripennis (glassy-winged sharpshooter): 124368877
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Entry
124368877 CDS
T09217
Name
(RefSeq) contactin isoform X1
Organism
hvi
Homalodisca vitripennis (glassy-winged sharpshooter)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
fn3
ig
V-set
Pur_ac_phosph_N
UL45
Ig_5
Lectin_C
FANCA_interact
Motif
Other DBs
NCBI-GeneID:
124368877
NCBI-ProteinID:
XP_046682307
EnsemblRapid:
LOC124368877
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Position
X:complement(30811473..30871356)
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AA seq
1229 aa
AA seq
DB search
MLLTSIRNFQAMWRLLLIAPLICLSSTQEEASWRCPQYWIQFQSSCYRFIKSPLHTRNDA
RKNCQAYESDLVSVNSVEEHGFLLYNLLWQDPQHRRWYTGSHQQSPGYWVNEDGTPLPDM
ESAFLPEPAEPQPNKDYMVYSFSNSLKKWGLEKVTGEELLLYICEAPLTKLHYVMADDRT
YQYGIDIEDPLKIPIGPYFINQPIDVVFDLSKRKITNDVSLSCLAGGYPAPTYEWFKEDY
QGDKLVSIKIDPLKDSRFTISGGTLIIHEPRKEEDRGLYHCKASNDYGTIISETVKLTFG
FIGEFNLKRSEEKGEENWGKTVYCDPPQSFPGVKYYWARDYFPNFVEEDKRVFVSFDGAL
YFSALENIDRGNYSCNVQSRVSDTGRNGPFFPLNVHPHSNHQQLKFPNNFPKAFPEAPVA
GKEVRLECVAFGYPVPSYNWTRRGSALPRQAIFASYNRVLLIPNVQVEDQGEYICRATND
RASIHNSVVLSIQAEPNFTIPLTDKHMDNKGELTWTCEAFGIPDVSYAWMRNGELLEVDK
LPEEDRARYVIQDNVLTIRYLNPERDPAMYQCRARNDLRTKYSSAQLRVLSLKPSFKKRP
LETETYAAEGGNVTIICSPEAAPRPKFTWKKDSLVIGSGGRRQIKENGNLIISPVSRDDE
GMYLCIAQNQYGTDESYGRLIVLRGPMLVEQLNPRVVTSVQRDVYLRCQAASEDILDIAY
IWTHNGLRIPHSEYANTNIKIDGGSLVIYNITLAEGGDYECIVKSAVGRIASRTSVFVEG
PPGPPGGVSVVDVSRYSATVQWTDGATNGRPIVSYIISGRTSWNKTWVNISDNVVAKEVN
RYTGRKEALLDNILRPWSTYEFRVAAANVLGYGFPSAPSPMYNTPPDKPHRAPSNVGGGG
GKIGDLTIAWTPLPPEDQAGPGVYYKVFWRRSEHDSEFQSLELKDLGNIGVTVVRIQQDF
YYTKYDVKVQAFNSIGAGPESEIVTIFSAEDMPQVAPQQVAARAFNSTSLNVSWVPIDQT
REKIRGKLIGHRLKYWNEKNREEDAVYFLSRTTRPWSLLIGLQPNTYYYVKVMAYNAAGE
GPESERFLEKTFRKAPQKPPSSVFVKALNPTTVRVVWRYVTPSQEEEPLIGYKVRVWEVD
QDMSTANDTFIALGNDLEAIVSDLSPGKTYNLRVLAFSNGGDGRMSSPTYVFQMGEPAAF
RSGSSRASGAAGVLSCLVALISCITRWSM
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
atgttattaacgtccattagaaactttcaagcaatgtggaggttactgttgattgcgccg
cttatctgcctgtcctcgacacaggaagaagcctcctggagatgtcctcaatattggatc
cagttccagtcctcatgttataggtttataaagtcacctttacacactcgcaatgatgct
agaaaaaattgtcaggcatacgagtcggacctggtgagtgtgaactcggtggaggagcat
ggattcctgctctacaatctgctgtggcaggacccacaacaccgtcgatggtataccggc
agtcaccagcagagtcctggctactgggtcaatgaggacggcactccgctgcctgacatg
gaatctgcattcctacctgagcctgctgagccccagcccaacaaagactacatggtttac
agtttctcaaactcgctgaagaagtggggactggagaaagtgaccggagaggagctgttg
ttgtatatctgcgaggcacctctgacgaaactccactacgtcatggctgatgacagaacc
tatcagtacggcatcgacattgaagacccactcaagatacccatcgggccttacttcatc
aaccaacccattgatgtagtgttcgacctttccaagcgaaaaatcacaaacgatgtttca
ctaagctgtctggcaggaggctaccctgcaccgacctacgaatggtttaaggaagactat
cagggggacaaactggtctccatcaagatcgaccctctcaaggactctcgcttcaccatc
agtgggggcactctcattatccatgaacctagaaaggaggaagaccgtggcttatatcat
tgtaaagccagcaatgactacggcaccatcatttccgaaactgtgaaacttacttttgga
ttcattggtgaattcaacctcaagcgatcggaagagaagggagaagagaattgggggaaa
acagtatattgtgatccacctcagtcctttccaggtgtgaagtattactgggccagagac
tactttccaaatttcgtagaagaggacaagcgagtatttgtgtcattcgatggtgctctg
tacttctcggccctggagaacatcgacagaggcaactacagctgtaatgtgcaaagtcga
gtgtccgacactggacgcaacgggccattcttccccctcaatgtccaccctcattcaaac
catcaacagctcaaatttccaaataattttccaaaagcatttccggaggctccagttgct
gggaaagaagtcagattggaatgtgtggcatttggatacccagttccgtcgtacaactgg
acgcggcggggctccgccttacctcggcaggccatcttcgcctcgtacaatcgcgtgttg
ctcatccccaatgtgcaggtggaggaccaaggggagtacatttgtcgagccactaatgac
agagccagcatccacaactcagtcgtgctgtctatacaagccgaaccgaactttacgatc
ccgttgaccgacaagcacatggacaacaaaggagagttgacgtggacgtgtgaggcgttt
gggatccctgacgtgagttatgcttggatgcgaaacggagagctgctggaggtggacaag
ttgccagaagaagacagggccagatatgtgatacaggataatgtgctgactatccgctat
ctaaacccagagcgagacccggccatgtatcagtgtcgtgctcgcaacgatctcaggacc
aagtattcatcggctcaactacgagtcttgtcactcaaaccgtcattcaaaaagcgtccc
ttggaaacggaaacttatgctgcagaagggggaaacgtaaccatcatttgtagtcctgaa
gctgcgcccagaccaaagttcacttggaagaaggactcccttgtaattggatccggtgga
aggaggcaaattaaggagaatggcaacctgatcatcagcccagtgtcgagggatgacgaa
gggatgtacctctgcatcgcacagaaccagtacggaacagatgagagttatggcagacta
atcgtactccgtgggcccatgctggttgaacagctgaatccaagggtggtgacatctgtt
caaagggacgtttatctccgatgtcaagctgcgtctgaggacatccttgacattgcttac
atctggacgcacaacggcctgcggatccctcacagcgaatacgccaacacaaatattaaa
attgatggtggttcattggttatttataacataactctggcggaaggaggagattacgag
tgcattgtcaagagtgctgtcggcaggatagcctccaggacctcagtctttgtagaaggc
ccacctggacctccaggtggtgtatctgttgtggacgtatcgaggtactcggcaacagtg
cagtggacagacggcgcaaccaacggccgcccaatcgtttcctacatcatttctggccga
acaagctggaacaaaacttgggttaacatatctgacaatgtggttgccaaggaggtgaac
cggtatacaggacgcaaggaggctcttttagataacatcctgcgcccctggtccacgtac
gagtttcgtgtggcagcagccaatgtgctgggatacggattcccctcagcaccctccccc
atgtacaacaccccaccagacaagccccatagggctcccagcaatgttggaggtggagga
ggaaaaattggagacttgactatcgcttggacaccattacctccagaagatcaggctggg
ccgggagtgtattacaaggtgttttggaggcgatctgagcatgacagcgaattccagagt
ttggaactcaaagacctcggcaacattggggtgactgtcgttagaatccagcaggatttc
tattacacgaaatatgatgtcaaagttcaggcattcaatagcatcggagccgggccagaa
tcggagatcgtaaccatcttcagtgctgaagacatgccccaggtggctccacagcaggtc
gcagctcgtgcgttcaactccacctccctcaacgtcagctgggtgcccatcgatcagacc
agggagaagatcagaggaaaactcatcggccacaggcttaagtactggaacgagaagaac
agagaggaggacgctgtgtacttcttgagtcgtactacaagaccctggtctctactcatc
gggttgcagcctaacacttactactacgtcaaagtgatggcgtacaatgctgccggagag
gggcctgagagtgaacggttcctagagaaaacattccgtaaggctcctcagaagccacca
tcttcagtgtttgtgaaagctctgaaccccacaactgtgagagttgtgtggagatacgtc
actccaagtcaggaggaggagcccctcattggttataaggtgcgagtgtgggaggtggac
caagatatgagtaccgccaacgacacgttcatcgctttaggcaatgaccttgaggctata
gtctcggacttgtctccagggaaaacatacaatctcagagtcctggcattttccaacgga
ggagatgggcgaatgtcttccccaacatatgttttccaaatgggtgaaccagcagctttc
cgtagtggtagcagtcgagcttcgggagctgcaggtgtcttgtcatgtctcgtagcgctg
atcagctgtatcacacgctggagcatgtaa
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