Homalodisca vitripennis (glassy-winged sharpshooter): 124369044
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Entry
124369044 CDS
T09217
Name
(RefSeq) Fanconi anemia group J protein homolog isoform X1
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
hvi
Homalodisca vitripennis (glassy-winged sharpshooter)
Pathway
hvi03440
Homologous recombination
hvi03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
hvi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
124369044
03460 Fanconi anemia pathway
124369044
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hvi03400
]
124369044
Enzymes [BR:
hvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
124369044
DNA repair and recombination proteins [BR:
hvi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
124369044
FA (Fanconi anemia) pathway
Downstream FA components
124369044
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
ResIII
DEAD
HBB
nSTAND3
Motif
Other DBs
NCBI-GeneID:
124369044
NCBI-ProteinID:
XP_046682685
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All DBs
Position
X:58404234..58484704
Genome browser
AA seq
1008 aa
AA seq
DB search
MDKFKMDKSISPEKYNRPILYSLVSPKKCERPVESTESSPSHNKYTQDSPSKFCCKSVNT
KLSDRPSGLSVDCTATACEPLSSQELSNLPSKEYLSRMVNNCDEIQSSSNVSHKIDFTSH
GPVTPSMTASPDRHRRTSSTPLLSNLDPNTSKRSIKMDRTSIPSMTPGTSRTKGRGCIGG
VKMPIAGVEVEFPFQPYPTQIYMMNQVLQAIKKAENCLLESPTGTGKTMALLSSCLAWQQ
QELKLVKQLELEALDKAFEDTETAINKGESNIKKTPMRRETGQQETKNNTPSVHPSSESS
SDDDIFQAPKRTKRSLGSEEPKDTVTATKETGPSETCDIDIVKPIEHFSLIEKDYADPKK
FRATQIFYGTRTHKQIAQVVDQLKRSPYAKDINMTILAARDHTCVNDMVRGKPNVTELCK
AAIDPVMGVSCLYYGGSSKISNFESLSNYGLPIVYDIEDMVCVGKKRRVCPYFTLRNLVT
QAGIIFCPYNYLIDPRIRSSMNVNLTKSIVIMDEAHNIEDICREAGSLLLKQSDLEEAMS
ECRDNIKKDRNPEEYKIIEDFLQSLYSWLDSLGPTVQYSDMNEAKTTMTGEDVVNRLHLS
NVSQENFQIFQDNLEKIETTKAEQPDLNYGISGKIKLLCDDIVVVLNYLYNPKNISKYKA
YLNREVGSNERKEQKKNEWFTKPSGRRGQSGREEERVWKYSLHLLCLSPNIVFSELLGAR
TIVLASGTLSPLDSFQAELAVKFPWVVKGRHVVPGQNLFASTVSSGPQRVDLKGVFENVN
RYDYQDELGRTILETSKVVPHGVLCFFTSYSLMDRLQQRWTSTGLLEELSEVKEIFWEPR
RKQDMNSVMDDFNARIKISTEFPNEEVGAIMFGVFRGKIAEGIDFSDDSARIVIAVGIPY
QNRFVNETSLKIKFNDENKSLINGNRWYKIQAYRALNQALGRCIRHKNDWGAVILLDSRF
SNRDVQDNLPNWIQQQLQNYQSWDTYLKNLTAFCKRMQQSNEPKSSLL
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atggataagtttaagatggacaaaagtatttcacctgaaaaatacaacaggccaattctt
tattccttagtaagccccaaaaagtgtgaaagacctgtagaatccactgagagtagccct
agtcataacaaatatactcaagattctcctagtaaattttgttgtaaatcagtcaataca
aagttgagtgacaggccatcaggtctgagtgttgactgcactgcaactgcatgtgagcca
ctttcttctcaagaattatcaaatctaccatcaaaagaatatctgtcaagaatggttaat
aattgtgatgaaatacaaagttcatcaaatgtatctcataagattgattttacttctcat
ggccctgtaacacctagtatgactgcttcaccagacagacacagaagaacatcaagtaca
ccgttattgtcaaacttagacccgaacacttcaaagcgatctatcaagatggaccgaaca
tctatcccctccatgacaccaggcacgtcacgaaccaagggacgaggatgtattggagga
gtgaagatgcccatagctggtgttgaagtagagtttccatttcagccgtatccaactcag
atatatatgatgaaccaggtcttacaggcgatcaagaaagctgagaactgtctactggag
agcccaacgggtactggcaaaactatggcactcctctcttcgtgtttagcctggcagcaa
caagaacttaagctggtgaaacagcttgagttggaagcactggacaaagcttttgaagac
acagaaacggctataaacaaaggtgaaagcaatattaaaaaaacacctatgagaagggaa
acaggacaacaagaaacaaaaaacaacactccttcagtacatcctagtagtgagagttct
tctgatgatgacatatttcaagcaccgaaaagaacaaaaaggagtttgggcagtgaggag
cccaaggatacagtgactgcaaccaaagaaactggcccctccgaaacctgtgatattgac
atagtaaaaccaatagaacatttttcactaatagaaaaagattatgctgatccaaagaaa
ttcagggctacacaaatattttatgggacaagaactcacaaacaaattgctcaagtggta
gaccagctcaagagatctccatatgctaaggacatcaatatgaccatcttagcagctaga
gaccacacctgtgttaatgacatggtgagaggtaaaccaaatgtcaccgaactctgcaaa
gctgccattgaccctgttatgggtgtaagctgtttatattatggtggatcttcaaagatt
tcaaattttgaatccctgtcaaattatggtcttcccatagtttatgacattgaagatatg
gtctgtgtagggaagaaaaggagagtctgtccttactttacacttcgcaacttagttact
caagcgggcattatcttttgtccttataactatctaatagatcccaggattcgatcatct
atgaatgtaaacctaaccaagagcattgtgataatggatgaagctcacaatattgaagac
atctgtagagaggcaggaagccttctactgaagcaatcagacctggaagaggctatgtcg
gaatgcagggataacattaagaaagatagaaatcccgaagagtataaaatcattgaagac
tttctacagagtttatactcttggttggattcattaggacccactgttcagtactcggac
atgaatgaagccaaaacaaccatgacaggagaagatgttgtaaacagactacacttaagc
aacgtttcacaagaaaatttccaaatatttcaggataatttggagaaaatagaaactact
aaggctgaacaacctgatttgaattacggaattagtggaaaaattaaactactatgtgat
gacattgtggtggtactaaattatctgtataatcccaagaacattagcaagtataaagct
tacctgaaccgagaagtagggagcaatgaacgaaaggagcaaaaaaagaatgaatggttc
acaaagcccagcgggaggagaggacagtcagggagggaggaggagagggtatggaagtac
tcccttcacttgttgtgcctaagtccgaatatagtgttcagcgaacttttgggagcgaga
actatagtgctagcatctggtaccctgtcacctctcgactcctttcaagctgaactggca
gtcaagttcccctgggttgtcaagggaagacatgtggtaccagggcaaaatttatttgct
tcaactgtgtcttctggtccacaaagagttgatctgaaaggtgtatttgagaatgtaaac
aggtatgattaccaagatgagttagggaggactatcctggaaacttcaaaagttgttccc
catggtgttttatgttttttcacatcttactctttaatggacagactacaacaaagatgg
acgtcaactggactcttggaagaattaagtgaagtaaaagaaatattttgggagcccaga
agaaaacaagatatgaactctgtaatggatgacttcaatgcaagaataaaaatttccact
gaatttcctaatgaagaagttggtgcaattatgtttggggttttccgtggaaaaatagct
gaaggaatagacttcagtgatgacagtgcacgaattgttatagcggtgggaataccgtac
caaaatagatttgtaaatgaaacaagtctaaaaataaaattcaatgatgagaataaaagt
ttgattaatggaaatcggtggtataaaatccaggcatacagggccttaaatcaagctctt
ggaaggtgtattaggcacaagaatgactggggagctgtgattttgttggactctagattc
tcaaacagagatgtgcaggataatctgcccaattggatccagcagcagttgcagaattat
cagagctgggacacatatttgaagaacttaacagctttttgcaaaaggatgcagcaaagt
aatgaaccaaaatctagtcttttataa
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