Homalodisca vitripennis (glassy-winged sharpshooter): 124369105
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Entry
124369105 CDS
T09217
Name
(RefSeq) laminin subunit beta-1 isoform X1
KO
K05636
laminin, beta 1
Organism
hvi
Homalodisca vitripennis (glassy-winged sharpshooter)
Pathway
hvi04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
hvi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124369105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
F5_F8_type_C
PAH_ZNF598
JAG1-like_EGF2
Motif
Other DBs
NCBI-GeneID:
124369105
NCBI-ProteinID:
XP_046682807
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Position
X:complement(66395576..66505212)
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AA seq
1797 aa
AA seq
DB search
MESYRMEKVLSGVEMAVGGPRSSLCLLTLIIIITFTSINAQAPWDRQQSFSKGHQRHSPC
ERSSCYPATGNLLIGRENRLSASSTCGLKGHRERYCIVSHLEERKKCFWCDSSSQASTQS
ALSHRIENIVYRMNPWTNKPTWWQSENGVENVTIQLDLEAEFHFTHLIITFKTFRPAAML
IERSYDFGKTWQVYRYFAHDCDTSFPGVSKEPQRTLTDVVCDTRYSSVAPSTEGEIIMRV
LAPNLQNLYNDLYSQEVQNLLKMTNLRINFTKLHTLGDDLLDDRQEIQEKYYYAIYEMVV
RGSCSCYGHASRCLPQEGVASKADMVHGQCECTHNTKGLNCEQCEDFYNDLPWKPAGKET
NACRRCNCNNHATSCHFDAAVFELTGRVSGGVCDGCQHNTMGRNCEQCKQFFYREPSLEF
SDPNVCQPCNCDPGGSLDEGICDSYTDEASDLVSGRCHCKANVEGRRCDTCKNGYWNFDE
YNPDGCQPCTCNTLGTINNEGCNQVTGECTCKRYVVGRDCNQCLPEYYDLSDSQDGCKPC
ECDLGGAFDNNCDVINGQCRCRPHLTGRSCSTPDQSFFVAQIDHLTLEAEAANCSSNCQV
EIREPYRDGQETTWTGPGFMLARPGSDLEFIVDNIKTSMEYDIVIRYEPKIAGDWRQVEV
TIERPSPVDPNGPCANARPQDDYKPVSLSSDARYIAIPPTCLEAGKTYKIKLMFKPDPPQ
PSSPTASILVDSIVLLPSLESIPFFVGSPIADNRKKEYMHYQCGTAFFTVIKGPVSDICK
KYHYSIGYYVYGGAFSCSCDPTGSLSSLCDPMGGRCQCKPNVVGRRCDRCAPGTYGFGPE
GCKACDCNSVGALDNFCDVSSGQCKCQAQTYGRACDQCQPGSWNYPKCQRCQCNGHADTC
NSATGACDSCRDFTVGHNCDRCIEGYYGDPSLAGDIPCRPCPCPGTLESGHSYADHCELD
PQSQDVVCECDEGYAGSRCDVCADNYYGNPEQVGGSCNLCNCSNNMDISRPGNCDPHSGK
CLQCLFNTEGFNCERCKENYFGDAINQLCTECVCSILGTNNSAGPCDGITGQCPCLPNVI
GAECDACKENHWKIASGMGCEACDCDPNGSYSDQCNQYDGQCQCKSGFGGRQCNQCQTNH
WGDPNVECKPCECNPEGSATLQCNRDNGSCICLQGIGGYNCDVCARGYLGSAPNCSPCGE
CFDNWDAILNNLSEETDKVIQAAREIKRTGATGAYTQEFDIMEKELKDVKQLLQNTTKST
IDLGHIDTYIDKLRVGLKESHDSLNGVGKELENATQRIYLSNLALADLRVKVNVLKETAS
ALKANATHLQESNVEGALNLTREAADHSHQIQAKGSETQDEIAKAERQCKRTEALVGRTS
TQFTQGQQDNSRAVDKLDQELTQLERNIPELNNQVCHKMGDPCDQLCGGAGCGFCGGISC
EDGAYTKSSKAFSFATDAENKIYEKEAKAEELFRGISQAKQETSSAKDVASEALLAASVA
QNRSETSVQQSSDLIKRLQGFLTTDGATALEIQNLASQAQQKNIQLQPEQITELAKNINT
TIASLTDINTILADTAEDLQLAQESKDQADRAKAEAENILTTAQTFLDTLEEAEEIQEKI
KTAVDTANSNIEQAKIDLTQITSETGEAQQKANETVTEVNQLQEQVKTLQTGFLKNGKDA
QEVKAEAESMTEEVKQAKDRAREMQSEYNLAVNTLREHSDDSLLAQTRAQKLLEKASQLS
LNTTDKLKQLKDAETQYREQKNELTSLTDAIKKLNERMGVYLIDINKKSVTYRNCLN
NT seq
5394 nt
NT seq
+upstream
nt +downstream
nt
atggagtcatacaggatggaaaaggtcctgtcaggggtagagatggcagtcggtgggcca
agatcatcactctgcctgctaaccctcataattatcattacattcaccagtattaatgca
caagctccatgggacagacaacaaagcttttcaaaaggtcaccagaggcattcaccttgt
gagaggagttcgtgttatccagcaacaggaaacctgctgattggtcgagagaatagactc
tctgcgtcgtcaacatgtggtttaaaaggacacagggaacgctactgtattgtgtcacat
ttagaagagaggaagaagtgtttttggtgcgattcaagttctcaggcaagcacgcaatca
gctctcagccacagaattgagaatattgtatacaggatgaacccatggacaaacaaaccg
acatggtggcagtcagagaacggagtagaaaatgtcaccattcaattagacttggaggct
gaatttcattttacacatctcataataactttcaaaacattccgtccagcagcgatgtta
attgaacgttcatacgactttggaaaaacatggcaggtctatagatattttgcccatgac
tgtgatacctcttttcctggagtttccaaggaaccacaaagaactttaacagatgtggtt
tgtgacacaaggtattcctcagtggccccttctacagaaggagagattataatgcgagtg
ttagcaccaaatttacaaaacttgtacaatgatctgtattcacaagaggtgcaaaatctg
ttaaaaatgacaaatttgaggataaattttacaaaacttcacacattgggtgatgaccta
ctggatgatagacaagaaattcaggaaaagtattactatgctatctacgagatggtggtg
cgaggttcgtgttcttgttatggacatgcgtctcgttgtctccctcaagagggtgttgcg
tccaaggcagacatggttcatggtcagtgtgaatgcactcacaacactaaaggattaaac
tgtgaacaatgtgaagatttctacaatgacctaccttggaaacctgcaggaaaagaaacc
aatgcttgtagacgatgtaactgcaacaaccatgcaactagttgtcactttgacgcagca
gtgtttgagctgactggtcgtgtgagtggtggtgtgtgtgatggttgccaacacaacacc
atgggacgaaactgtgaacaatgcaagcagtttttctacagggaacctagtctggaattc
tctgatcccaacgtttgccagccatgcaactgtgaccctggtggttctctggacgagggc
atctgtgactcatataccgatgaggccagtgatttggtgtcagggcgatgtcactgcaaa
gccaatgtggagggccgccgctgtgatacctgtaaaaatggctactggaattttgatgag
tacaatccagatggctgccaaccttgcacctgtaacactctggggacaatcaacaatgag
ggctgcaaccaagtaactggtgaatgtacatgcaaacgctatgtggttggacgagactgc
aaccaatgtctgccggagtactatgacctctcggactcacaggacggctgcaagccatgt
gaatgtgatttgggcggagcctttgacaacaactgtgatgtcatcaatggccagtgcagg
tgtcggccacatttgacaggacgcagttgtagcaccccagaccaaagcttctttgttgcc
cagattgaccatctgacactagaagctgaggcagccaactgtagctctaattgtcaagtg
gaaattagagaaccgtatcgtgatggccaagaaactacttggacaggtcctggtttcatg
ttggctcgaccaggctcagatcttgagttcattgtggacaacataaagacatcaatggag
tatgacattgttatacgatatgagcccaagattgctggagactggagacaggtggaagtg
acaatagaacggccatcccctgttgaccctaatggaccgtgcgcgaatgctagacctcaa
gatgactacaagcctgtttcattatcatctgatgctcgttatatagcaataccaccgact
tgtcttgaagcaggcaaaacctacaagatcaaacttatgtttaagccggaccctcctcaa
ccttcctcaccaacagcatcaattcttgtcgattctattgtattgctcccgagtttggaa
agtattcccttctttgtgggaagtcctatcgcagacaatcgcaagaaagaatatatgcac
taccagtgtggcactgcatttttcactgtaatcaaaggccccgtgtctgacatatgcaaa
aaataccattatagcattggctactatgtatatggaggagcattttcgtgcagttgtgac
cctacgggctctctgagcagcctatgtgacccaatgggtggtcgatgtcaatgtaagccc
aatgtggtggggcgcaggtgtgatcggtgtgctcctggaacctacggatttggaccagaa
ggctgtaaagcgtgtgactgcaattcggttggagctctggacaacttttgtgatgtaagc
agtggacaatgcaagtgccaagcgcaaacttatgggcgggcctgtgatcagtgccagccc
ggctcctggaactatcccaagtgccagcgatgtcagtgtaatggccatgccgacacctgt
aactctgccacaggagcatgtgacagctgccgtgattttactgttggccacaattgtgac
aggtgtatagagggatactacggtgatcccagcttggcgggagatattccatgtcgtcca
tgtccttgccccgggactctcgagtcaggccattcctatgccgaccactgtgaactggat
cctcagtctcaagacgtagtctgcgagtgcgatgaaggctatgctgggtcaagatgtgat
gtgtgtgccgataactactacggaaaccctgagcaggttggaggcagttgtaacttgtgt
aactgtagcaacaacatggacatatcacggcctggcaattgtgaccctcactctggcaaa
tgtctgcagtgtctcttcaatactgaagggtttaattgtgaacgctgtaaagaaaattat
tttggtgacgctatcaaccagctttgcacagaatgcgtttgcagtattctggggacgaac
aattcagcaggaccatgtgatgggatcacaggtcagtgtccatgcctgcccaatgtaatt
ggagccgaatgtgatgcctgtaaagagaaccactggaagattgccagcggcatgggttgt
gaggcatgtgactgtgatcctaacgggtcatactctgaccaatgcaatcagtatgacggg
cagtgtcaatgcaagtcaggcttcggagggcgacagtgcaatcagtgccagaccaaccac
tggggagatcctaatgttgagtgcaaaccttgtgagtgtaacccagagggatcagctaca
ctacagtgtaaccgtgacaatggttcctgcatttgcctccagggcataggtggctacaac
tgtgacgtatgtgctcgtggttaccttggatctgccccaaattgcagtccttgtggagaa
tgttttgacaactgggatgccatcctcaacaatctatcagaggaaacggataaggtgatt
caagccgctcgtgaaataaagcgaaccggagctactggtgcctatactcaagaatttgac
ataatggagaaagaactgaaggatgtgaaacaacttctgcagaataccaccaaaagtacc
atagatcttggtcatattgatacttacattgataagctgagagtaggcctaaaggaatct
cacgacagtctaaatggagtgggaaaagaactggagaacgcaactcagcggatatatttg
tcaaacctggctctagcagacttgcgtgttaaagttaatgtactcaaggaaactgcctct
gcactcaaagctaatgccactcatcttcaagagagtaatgttgaaggtgccttgaacctg
actcgggaggctgcagatcattctcaccagattcaggccaagggctcggagacacaagat
gagatagccaaggctgagcgtcagtgcaaacgaaccgaggcacttgtgggccgcacttcc
acccaattcacccaaggtcaacaggacaactctcgagctgttgacaaactggaccaagag
ctcacccagctggaacgcaacattcctgagctcaacaatcaggtatgccacaagatgggg
gatccatgtgaccagttgtgtggtggagcaggctgtggcttctgcggtggcatctcctgt
gaagatggagcgtacaccaagtctagcaaagctttcagtttcgccactgatgccgaaaat
aagatctatgaaaaggaagctaaagcagaggagctttttagaggtatatctcaagctaag
caggagacatcttcagctaaagatgttgcctcagaagcattattagcagcaagtgttgcc
cagaatcgctctgagacctcagtacaacagagttcagacctgataaagcgattacaaggt
tttctgacgacggacggtgccacagctcttgaaatacagaacttagcgtcacaggcacaa
cagaagaatatccagcttcagccagagcaaataacagaattggctaaaaacataaataca
actattgcctctctgactgacatcaacacgattctcgcagatacagcagaggacctacag
cttgcacaggagtcaaaggatcaggcagacagagccaaagcggaagctgaaaatatactg
accacagcgcaaacatttttggatacattagaggaggcagaagaaattcaagaaaagatt
aaaactgctgtagatactgcaaattctaatatagaacaagcaaagattgatttgactcaa
atcacaagtgagactggagaggctcagcagaaagccaatgaaaccgtaacagaagtaaac
caacttcaagaacaggtgaaaactctacagacaggatttttaaagaatggaaaggatgcg
caagaagtaaaagcagaggcggagagtatgacagaggaagtgaagcaagctaaagatcga
gctcgagagatgcagtctgagtataaccttgcagtaaatacattacgtgaacactccgat
gattcactactagctcagacgcgagctcagaaactgctcgaaaaggctagtcagctctcg
ctcaacacaactgacaaactgaaacaactcaaagatgcagaaacacagtatcgtgagcag
aaaaatgagctgacatcactaacagatgccatcaagaaattaaatgaacggatgggcgtg
tatctcatcgacattaacaaaaagagtgtaacctacagaaattgtctaaactag
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integrated database retrieval system
