Homalodisca vitripennis (glassy-winged sharpshooter): 124369221
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Entry
124369221 CDS
T09217
Name
(RefSeq) muscle calcium channel subunit alpha-1-like isoform X1
KO
K04851
voltage-dependent calcium channel L type alpha-1D
Organism
hvi
Homalodisca vitripennis (glassy-winged sharpshooter)
Brite
KEGG Orthology (KO) [BR:
hvi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hvi04040
]
124369221
Ion channels [BR:
hvi04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
124369221
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
CAC1F_C
PKD_channel
DUF2975
T4SS_pilin
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
124369221
NCBI-ProteinID:
XP_046683026
LinkDB
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Position
X:complement(75817775..76230953)
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AA seq
1992 aa
AA seq
DB search
MDAAPRSPVATSGIHYELPQTGKPLSSAWQTALSATAMSATNNNNNNNNNNNANKQTPKR
PVRRGVKPPPERPQRALFFFTLKNPLRKLCIDVVEWKPFEWLILFTIFANCVALAVFTPY
PNSDSNITNAYLEKIEYIFLVIFTVECVMKIIAYGFIAHSGAYLRNGWNLLDFTIVVIGM
LSTLLQSLLKEGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSILRAMVPLLHIALLVIFV
IIIYAIIGLEMFSGTLHKSCYNKTTGQLMDKPHPCADPGSAGFQCSVYGSDMICHEGWEG
PNHGITNFDNFGLAMLTVFQCITLEGWTDVLYNIEDALGNTWQWIYFISMVILGAFFVMN
LILGVLSGEFSKEREKAKARGDFHKLREKQQIEEDLRGYLDWITQAEDIEPEGEDQGNNQ
DGKNKNDRETESADRLEGDEGEIQESWFRRKKKDFDRVNRRMRRACRKAVKSQAFYWLII
ILVFLNTGVLATEHYGQPNWLDDFQEATNMFFIALFTLEMLLKMYSLGFQGYFVSLFNRF
DCFVVIGSISEMILTRTHWMPPLGVSVLRCVRLLRVFKVTKYWRSLSNLVASLLNSIQSI
ASLLLLLFLFIVIFALLGMQVFGGKFNFEKAVEDKPRQNFDSFWQSLLTVFQILTGEDWN
AVMYDGIQAYHGVGGFGILACIYFIILFICGNYILLNVFLAIAVDNLADAESLTAIEKEA
DEEAEKQAEMDQMGEGGENTSQLEGEEHMDDDQRDYDGNIDEENEEMSVKDEDTRSHTKV
CLEVGDSEDYYEEQNDNQVVTGEPGESKNGEDNQRKRSALPRRVSDTSQKTEKKPLPEGS
SFFVFSHTNRFRVFCHWFCNHSHFGNVILVCIMVSSALLAAEDPIHQDSQRNQILNYCDY
FFTSVFTIEICLKMISYGFVIHDGAFCRSAFNLLDLLVVCVSLVSIYWKSGAISVVKILR
VLRVLRPLRAINRAKGLKHVVQCVIVAVKTIGNIVLVTCLLQFMFAVIGVQLFKYVVKCV
IVAIKTIGNIMLVTYLLQFMFAVIGVQLFKGKFYKCNDGSKMSKEECRGHFLTFADGDIN
KPSIEKREWERNRFHFDDVAEAMLTLFTVSTFEGWPGLLYVSIDSNAENRGPIHNFRPIV
AAYYIIYIIIIAFFMVNIFVGFVIVTFQNEGEQEYKNCELDKNQRNCIEFALKAKPVRRY
IPKHRFQYKVWWFVTSQPFEYTIFVLIMINTITLAMKFNEQPEFYTKTLDILNIVFSVVF
AAEFIFKVAAFRFKNYFGDPWNVFDFIIVLGSFIDIVYDRLNDETPGKERPGSSLISVNF
FRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQALPYVALLIIMLFFIYAVIGMQVFGRIRL
GSSAEESHIHRNNHFHTFPQAVLVLFRSATGEAWQEIMLDCSHRPNIVLCDEETGEGDNK
EGCGSDIAFPYFISFYVLCSFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFIRLWSEY
DPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFA
VVRTSLHIKTEGNIDDANEELRAVIKKIWKRTSPKLLDQVVPPPGVDDEVTVGKFYATFL
IQDYFRRFKKRKEQELKDGDKESHNTVTLQAGLRTLHDAGPELKRAISGNLEELIDDNPE
PMHRRNHSLFGSVWSSVRRGRGSFHRAKSLKTNATNIKMNHLDIPGRNLRKVSPTNSIDY
LPYNSLQRAVTDGMNHLNSLVKPAVPGEKSMQDIGQTAEDESMIPLRHLTVSNGDADMTY
HPYQIIDMPDGRRNMEVSGPTPPPRRMLGCIGGGGPLSPSFPRIAGGLKLAQTQAMAVAV
GFMPEPQLGFGKRSPLLHRASFHGRGSKPGESNGSLTMDRLSHSLPGSPADRRPIFPEVV
GSAESLVGRVLVEQGLGKFCDPEFVRYTSREMQEALNMTQEEMDRAAHRLLLQEQQGRPI
SFQGQSGPDPHL
NT seq
5979 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgccccccgctccccagttgctacttcaggaatacactatgagttgcctcag
accggcaagcccctgtccagcgcttggcaaactgctctgagcgccacagccatgagtgcc
accaacaataacaacaacaataacaataacaacaatgccaacaagcagacgcccaagcgg
ccggtgcggagaggggtgaaaccaccaccagaacgtccgcaacgggcgctatttttcttc
acactaaaaaatcctttgcggaagttgtgcatagatgtcgtcgaatggaaacccttcgaa
tggttaattctattcacaattttcgcgaattgcgtggcactcgcggttttcaccccttac
cccaacagtgattccaacatcacaaacgcttatttggaaaagattgaatacattttttta
gtgatatttacagtagaatgcgtaatgaagataatcgcatatggatttattgctcattct
ggtgcatatttgcgaaacggctggaacttactagattttacaatagtagttataggtatg
ttaagcacattactacaaagtttgttgaaggagggattcgatgtgaaggcgttgagagcc
ttcagggtattgcgacctctacgactcgtttctggggtcccaagtttgcaagttgtgcta
aactctatccttcgtgccatggtgcctttgttacatattgctcttctagttatctttgtc
attattatttacgcgattattggtttggagatgttctcgggtacactgcacaaatcatgc
tacaataagactacaggccagctgatggacaagccacatccctgtgcagatcctggatct
gcaggcttccagtgctctgtctacggcagtgatatgatctgtcatgaaggctgggaagga
ccaaaccatggcatcacaaattttgataactttggtctcgccatgttaactgttttccaa
tgtatcactctagaaggatggactgatgttttatacaatatagaggatgcacttggaaat
acatggcaatggatttatttcatttctatggtcatacttggtgctttttttgtgatgaat
ctaattcttggtgtcctcagtggagagttttccaaagaaagagaaaaagctaaagcgaga
ggtgatttccataagttaagagaaaagcaacaaatagaagaggatctgagggggtatcta
gactggataacacaagcggaagacatagaaccagagggagaggaccaaggcaacaatcag
gatggaaaaaacaaaaacgaccgtgaaacggaatctgctgataggttagaaggagacgag
ggagaaatccaggaatcgtggttcagaagaaagaaaaaagattttgatagggtcaacagg
aggatgcggcgtgcttgcagaaaggcagtcaaatctcaggcattttactggctcatcatc
attttagtttttctcaacacaggagtacttgcaactgaacattacggacaaccaaattgg
ttagatgattttcaagaggccacaaatatgttcttcatagctctcttcactcttgagatg
cttttaaaaatgtacagtttaggttttcagggatattttgtttcattattcaatcgtttt
gattgttttgttgttattggaagcatatcagaaatgattttaacaagaacacactggatg
ccaccattaggtgtttctgttttgcgttgtgtcagattgctcagggtttttaaagttacc
aaatactggcgatctttatcaaacttggtcgcatcattgctgaactcaatacaatctatt
gcatccctgctgctcttgctctttctgtttattgtcatctttgctttacttggaatgcaa
gtatttggtgggaagttcaactttgagaaagcagtggaagacaaacctcggcaaaacttt
gatagcttctggcagagtctgctcacagtgttccagatacttacaggtgaagactggaat
gcagtgatgtatgatgggattcaagcgtaccatggagtgggaggttttgggattctagct
tgcatttatttcatcatccttttcatctgtggtaactatatcctgctaaatgtcttcttg
gccattgctgtagacaacttggctgatgcagagtcccttactgcaatcgaaaaagaagct
gatgaagaggcagaaaagcaagcagaaatggatcaaatgggagaaggtggagaaaatact
tctcaactagaaggtgaagagcacatggatgatgatcaaagagattatgacgggaatatt
gatgaggaaaatgaagaaatgtctgtcaaggatgaagacacaagaagtcacactaaagtc
tgtttggaggtgggtgatagtgaggactattacgaggaacaaaatgataatcaagtggta
acaggcgaacccggtgagtcaaaaaatggagaggacaaccagaggaaaaggtctgctttg
ccaaggcgtgtttcggacaccagccagaaaactgagaaaaaacccctccctgaaggaagc
tccttttttgtatttagccatacaaacaggttcagagttttctgccactggttttgcaat
cacagccactttggaaatgtaatcctagtttgtattatggtctcctcagcccttctagca
gcagaagatccaatacatcaagattctcagcgcaatcagatactgaactattgtgattat
ttcttcacttcagtttttaccattgaaatatgtttaaaaatgatctcctatggtttcgtg
attcacgatggagcattttgtcgatctgcatttaacctgctcgatctcctagttgtgtgc
gtctctttggtctctatatattggaagtcaggagctatctcagttgtcaagattctcagg
gtgttgagagttcttaggcctctgagagccatcaatagagcaaaaggattgaagcatgta
gtccagtgtgtgatagtcgcggtaaaaacaatcggcaacattgtgctggttacctgtctg
cttcagttcatgtttgcagttattggagtgcaattgttcaagtacgtagtgaaatgcgtg
atagtagcgataaagaccatcgggaatatcatgctggtaacatacctactccaattcatg
tttgctgtcataggagttcaactttttaaggggaagttctataaatgtaatgatggatca
aagatgtccaaagaagaatgccgaggccattttctcacttttgccgatggagacatcaat
aaaccatcaatagaaaaaagagaatgggaacgaaacagatttcactttgatgatgtggcg
gaagcaatgctcactttattcacagtttctacatttgaaggctggcctgggcttttgtat
gtttctatcgattcaaatgcagagaacagaggacccattcacaactttcgaccaattgta
gcagcttactacattatctacatcattataattgctttcttcatggtcaatattttcgtt
ggtttcgttattgttacatttcaaaatgaaggtgaacaagagtacaaaaactgtgaactt
gataagaatcagaggaactgtattgagttcgccctcaaagcaaagcctgtgcgaagatat
attcctaaacaccggttccagtacaaagtgtggtggtttgtgacatcacagccatttgag
tacacaatcttcgtcttgatcatgatcaatacaatcactcttgccatgaaattcaatgaa
caaccagaattctataccaaaactcttgacatactcaacattgtcttcagtgttgttttt
gctgcagagttcatattcaaagtagctgcatttagatttaagaactattttggtgatcct
tggaatgtgtttgatttcatcatagtgctgggcagtttcattgacatagtatacgacaga
ctaaacgatgaaactccgggaaaggagcggccaggttccagtctaatatcagtaaacttc
tttcggctgtttcgtgtgatgcgtctggtgaagcttctcagtcgaggagagggtatccga
acgttgctgtggacattcataaagagttttcaagctctgccttatgtagctctgcttatc
atcatgcttttcttcatctatgctgtcattggaatgcaggtttttgggaggattagacta
ggttcttcagcagaggaatcgcacatccacaggaacaatcacttccatacattccctcaa
gccgttttggtcttgttccggtcagctacaggtgaagcttggcaagaaatcatgctggac
tgctcccaccgccccaacattgtgttgtgcgatgaggagacaggggaaggggataacaag
gaaggatgtggatctgatatagcctttccttacttcatttcattttatgtactctgttct
tttttgatcattaatttgtttgttgctgttattatggacaactttgactatttaacacgt
gattggtcaatcttgggtcctcatcatttggatgaatttattcggttgtggagtgaatat
gacccagatgccaaaggcagaatcaaacatctagatgttgttacactgttgcggaagatt
tcaccacctcttggttttggaaaactttgccctcatcgagtggcttgcaagcggttagtg
tcaatgaatatgcctctaaacagcgatggcacagtgctgttcaatgctactctctttgct
gtggtacgcacatctctccatataaaaacagaaggcaacattgatgatgcgaatgaggaa
cttcgtgcagtgataaagaagatttggaaaagaaccagtcctaagctcctggatcaagta
gtccctcctcctggcgttgacgatgaagttactgttggaaagttttatgccacattcctt
attcaagattatttcaggcgatttaagaaaagaaaagaacaggaacttaaagatggagac
aaggagtcacacaatacagttactttacaggctggtttacggacattgcacgatgcagga
ccagaactgaaacgagcgatttcaggcaacttggaagagctcattgatgacaacccagaa
cccatgcacagacgaaatcactctttgtttgggagtgtttggtcctcagtgagacgtggt
cgtgggagcttccatcgagctaaatctctgaaaaccaatgccactaatatcaagatgaat
catctggacatccctggaagaaatcttagaaaggtgtcaccaacaaactcaatagactac
ttgccttacaactctctccagagagctgtcacagatggcatgaaccacctcaacagcttg
gtcaaacctgctgtccctggtgaaaagtcaatgcaggacatcggccaaacagcagaagat
gagtctatgattccattacggcatctaacagtttccaatggggatgctgacatgacttat
cacccgtatcaaatcatagacatgccagacgggcgccggaacatggaagtgagtgggccc
accccacctccacgccgcatgctcggctgtatcggtggtggcggtccgctctcaccgagt
ttccctcgcattgctggaggcctcaagctcgctcaaactcaggccatggcagttgctgtc
ggctttatgccagaaccccaactgggttttggcaaacgatcccctttgctccacagagct
tcctttcatggcagaggcagcaaacctggggagtccaacggcagcctgaccatggacaga
ttatcccactcactgccagggagtccagctgaccgaaggccaatcttcccagaagtcgtc
ggctcagccgaaagcctggttggcagggtactggtggaacaaggactaggtaaattctgt
gatccagagtttgtgcgatacacgtcacgtgagatgcaggaagctctcaacatgacgcaa
gaggagatggatcgcgcggcgcaccgtttgctgctccaggagcaacaaggccggcccatc
tcgttccagggacagtcaggacccgatcctcacttatag
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