Homalodisca vitripennis (glassy-winged sharpshooter): 124369302
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Entry
124369302 CDS
T09217
Name
(RefSeq) nuclear valosin-containing protein-like isoform X1
KO
K14571
ribosome biogenesis ATPase
Organism
hvi
Homalodisca vitripennis (glassy-winged sharpshooter)
Pathway
hvi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
hvi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
124369302
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hvi03009
]
124369302
Ribosome biogenesis [BR:
hvi03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
124369302
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Nucleolin_bd
RuvB_N
AAA_16
AAA_22
AAA_5
Vps4_C
AAA_14
AAA_33
TIP49
NPHP3_N
AAA_2
nSTAND3
Mg_chelatase
RNA_helicase
AAA_28
AAA_18
AAA_17
ABC_tran
Rad17
NACHT
IstB_IS21
TsaE
Zeta_toxin
ATPase
AAA_7
Viral_helicase1
Sigma54_activ_2
THAP
Motif
Other DBs
NCBI-GeneID:
124369302
NCBI-ProteinID:
XP_046683198
LinkDB
All DBs
Position
1:111736218..111786228
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AA seq
926 aa
AA seq
DB search
MNSFGKNKVLLSTPNQSRSFGPYGRGGNRNFVPQNGRPDRPNNDCRPYFSDQLILSRVAQ
YLQNTGKNAFIDFDLMVDDLQREFREYRRKKRSAFKHLLKKAVEVITFENALNQHGSVPI
DEVDEDENGYAVERSPDYAFEGDGDVNSTLEDSYLQQNAKRSRKTSDPGTQELISIVTSD
EDDAEGNPAKAAEGKSSEPPPQRTELVPPEVSPVARPVGGETQTTKKRRAEARLASSKKF
KTSLEPLRPSVSFKDIGGNEKVLQEVTQLLIHMRHPEVYRVLGVSPPRGFLLHGPPGSGK
TLLAHAISGELKFPLLKVAAPELVGGLSGQSEERIRELFEEAVALAPCILFIDEVDAITP
NRETAQREMERRIVAQLLSSMDELANNEKGDQVLVIGATNRPDSLDPALRRAGRFDREVC
LGIPDRESRLSILQTLCHSLRLTPDLQLSEVAMMTPGYVGADLKSLVTESAMAAVNRLFK
TLRVPDTKTSPAEVVQTTSSTSGETSNATALIVANEDAGQEATKKSEDSDKKPDNPEGAT
TEVEEMEVQVVPLDNEDTSDDVQVLDEQTSPPQGEERKSAEPEPEPEPEPKPETTPPSLL
HSTPLTKEQLEEVYITMEDFRVALKSVQPSAKREGFATVPDVKWEDIGSLQDIRHDLEMA
ILAPVKFPQQFSQMGLHTPTGVLLCGPPGCGKTLLAKAVANEAGINFISVKGPELLNMYV
GESERAVRQCFQRARSSQPCVIFFDEIDALCPKRTNMENGASRVVNQLLTEMDGVEARPG
VFLMAATNRPDIVDPAVMRPGRLDKVLYVGLPAAEDRMDILRALTKGGKTPLLGEDVDLT
EVARNPCCEGYSGADLAALVREASIEALKEFMASRDQNQDQMAGEIKVCGRHFTAALSKI
RPSVSDRDKMRYEQLRLQYAAVPSKG
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgaacagttttggtaaaaataaagtgttattaagcactcctaatcaaagtagatctttc
ggcccctatggtaggggtggcaataggaactttgtaccccaaaatggaaggcctgacaga
cctaataatgattgccggccctatttttctgatcagttaattcttagtcgagtggcacag
tatcttcagaatactggaaaaaatgcgttcattgattttgacctcatggttgatgacctc
caaagagaattcagagaatacagaagaaagaagcggtcagctttcaaacatcttctcaaa
aaagctgttgaggtgataacattcgaaaatgctttgaaccaacatggtagtgttccgatt
gatgaagttgatgaagacgagaatgggtatgcagttgagaggtctccagattatgctttt
gagggtgatggtgatgtgaattctactctagaagacagttacttacaacaaaatgcgaaa
agaagcaggaaaacatcagaccctggcactcaagagttgattagcattgtaaccagtgat
gaagatgatgctgaaggcaaccctgctaaagctgctgagggtaaaagcagtgagccacca
cctcaaagaacagagctggtcccaccagaagtgtccccagtagctaggcctgtgggaggg
gagactcagaccacgaagaagcggcgggccgaggctaggttggcaagtagcaagaagttt
aagacctctctggagcctttgcgacccagtgtttctttcaaggacatcggtggtaatgaa
aaggttttacaagaagttacacagctgctgatccacatgcgccatccagaggtctaccgt
gtgctaggagtgtctcctccaagaggatttctactgcacggacctccaggttcgggcaag
actctgctggcccacgccatatctggggagctgaagttcccactgctgaaggtggcagct
cctgaactggtaggggggctgtcaggacagtcggaggagaggatccgggagctgtttgag
gaggcagtggcactggctccttgcatcctgttcatagatgaggtggacgccatcacaccc
aaccgtgagacggctcaacgtgagatggaacggcgtatcgtagctcagttactctcctct
atggatgaactggcgaacaatgagaagggggatcaggtgctggtgataggagccacgaac
cggcctgactcactggaccctgcactacgccgcgcaggcaggttcgaccgggaggtctgt
ttgggtatcccggacagagagtcccgcttgtctatcctgcagacgttgtgtcactctcta
cggctgacaccagacctacaactgtcagaggtagccatgatgacacctggctatgtgggg
gctgacctcaaatctctggtcaccgagtctgctatggctgctgtcaacaggctgttcaag
actctgagggtgcccgacacaaagacctctccagcagaagtagtgcagacgacatccagt
acatctggtgagaccagcaatgcaactgccctgatagtggctaatgaggatgcaggtcaa
gaagccactaaaaaatctgaagactctgacaaaaaaccagacaatcctgaaggagccacc
actgaggtagaagagatggaggtacaggtggtgcctctggacaatgaagatacatcagat
gatgttcaggtgctggatgagcagacctcaccacctcaaggagaggaaaggaaatcagct
gagcctgagcctgagccagagccagagccaaagccagagaccactcctccctccttactc
cactccacacccctcacaaaggaacaacttgaagaagtgtacatcacaatggaggatttc
cgagtagctctcaagtctgtgcagccatcagctaagagggaagggttcgcaactgtccca
gatgtcaagtgggaagacatcggctccttgcaggacatccgacatgacctcgaaatggct
atattggctccagtaaagttcccgcagcagttctctcagatgggtctccacacgcctact
ggagtgctgctatgcggacctcccggctgcggcaaaaccttgctggccaaggcggtggct
aatgaggctggaatcaacttcatctctgtcaagggccctgaactgctgaacatgtatgtt
ggagagagtgagcgtgcggtgaggcagtgcttccagcgtgcacgcagttctcagccctgc
gtgatattctttgatgagatcgatgcgctgtgccccaagcgaaccaacatggagaacgga
gccagtcgagtggtcaatcaactgctcaccgagatggatggcgtagaggcgagacctggc
gttttcctcatggctgcaaccaaccgacccgatattgttgaccctgctgtgatgagacca
ggaagactggacaaggtactttatgtagggttgccggctgcagaggatcggatggacatt
ctcagagctcttaccaagggaggcaaaacaccactgttaggtgaggatgtggatttgact
gaggtagcacggaacccttgctgtgagggctacagtggagcagacttggcagccttggtg
cgagaggccagcatagaggctctcaaggagttcatggcatcaagagatcaaaaccaggat
cagatggcaggagaaattaaggtgtgtggacgacacttcactgcagctctcagcaagata
cggccctctgtttccgacagggacaagatgaggtatgagcaactacggctgcaatatgct
gcagtaccttccaaaggataa
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