Homalodisca vitripennis (glassy-winged sharpshooter): 124369586
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Entry
124369586 CDS
T09217
Name
(RefSeq) 3'-5' RNA helicase YTHDC2-like isoform X1
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
hvi
Homalodisca vitripennis (glassy-winged sharpshooter)
Brite
KEGG Orthology (KO) [BR:
hvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hvi03041
]
124369586
Enzymes [BR:
hvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
124369586
Spliceosome [BR:
hvi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
124369586
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Helicase_C
HA2_C
HA2_N
OB_NTP_bind
Ank_2
wHTH-PRTase_assc
tRNA_bind_2
Motif
Other DBs
NCBI-GeneID:
124369586
NCBI-ProteinID:
XP_046683583
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Position
X:complement(94498561..94645555)
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AA seq
744 aa
AA seq
DB search
MSLMFVSISFLQPCSVSITRYGLRLSNRTLSLSILFDILSIFDVKDCLLCLSFLMLNCCS
EDFLKNNQHSTTGVTALMAASAVYKYEVVEDLVHKHAPSIEIVCKDNKTALDYACHSEEK
SGLLEAYHKTEEIHEKENNQADNLEEGQVTISSTDLKRLEQYEKYFEKLLDVIDYHLTVK
LLLHIHLNEPEGAILVFLPGFEHISAVQCELSKLLSDSENRKIAIHFLHSQMQTTEQKKA
FVPAPPGIRKIILSTNIAETSITITDIKYVVDTGKFKEKSFNPENGVHSLQCEWVSKASA
RQRRGRAGRVQNGTCYRLFSRRLFQQMKEYETPEILREPLDEICLNATQLIPSGMKMSEF
FSRAIDPPKQESVTNAIECLKMMKAINDNEQLTPLGKQMIKVPLEPQCSKIILYGVMLKC
LEPALILACCISQGDLFKIPAGQLLKQRAASCKKQFINKGYSDDLISIKIFETLQKATEK
SSFFNPFKWCFDNFISCDKVNKIIQMKEQILSHLTNNGWVNEKDDLNQYSKRWAVVKAAL
TSGLYPNVARINIPTRQIQTPYLSSAIVHSKSVLINKLSKKSIVKGETVPSSWMVYGEAL
RVGNSVCLYENTLVSPLTMCLCVGSTPKNGSAHIVIRDGGDGHLTCVPADTEVELHFDSL
VIIRTDIELAVLITDLRRKWDAVVERRLLDPRRRLNKEENAILQTVVNVLVDQDKILNLD
QQLFLKPGLSLTRLNCGRGRHSNN
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgatgtttgtgagtatttccttcttacagccatgttctgtaagtattaccagg
tatggtttgagattgtctaatagaacattgagtctgtctattttatttgacattctatct
atatttgatgtaaaagattgtttactttgcctttcatttttaatgctgaattgctgctct
gaggattttctaaaaaataatcagcactctacaactggtgtaaccgccctaatggcggct
tccgctgtgtacaaatatgaagttgttgaagatctcgtgcacaagcatgcaccttcaatt
gaaattgtgtgtaaggataataaaaccgctcttgactatgcttgccacagtgaagaaaag
agtggattgttggaggcatatcacaaaactgaagaaatccatgagaaggaaaataaccaa
gctgataacctggaagagggccaagtgacaatcagcagcacagatttgaagcgtcttgaa
cagtatgagaagtattttgaaaaactattagacgttatagactatcatctaaccgtcaaa
cttttgctacatattcaccttaatgaaccagaaggtgctatacttgtctttttgccggga
tttgaacatatttcggcagtacagtgtgaactttccaagcttttgtctgatagtgaaaat
cgaaaaatagcaattcattttctacattcccaaatgcagaccactgaacagaagaaggct
tttgtgccagcacccccggggattaggaagatcattctgtcaaccaacattgcagaaaca
agcataacgatcacagatattaagtatgtggtagacacaggaaaatttaaagaaaaaagc
ttcaacccagaaaatggggtccattcactacaatgtgagtgggtgtcaaaagcttcagcc
agacagcgtaggggtcgagcaggcagggttcagaatggaacctgctaccgcctcttttcg
cggagactattccaacagatgaaggaatacgagacaccagaaatattaagggagcctctt
gacgaaatatgtttgaacgcaactcagttgatcccttctggtatgaaaatgtctgagttt
ttctccagggccattgatccaccaaaacaagaaagtgtaacaaacgccattgagtgcctg
aagatgatgaaagcaatcaacgacaatgaacaacttacgccgttggggaaacaaatgata
aaagtgcctttggaacctcagtgtagtaaaattattttgtatggggtaatgcttaagtgc
ttggagcctgcacttatcctagcctgctgtatttctcaaggagatctctttaaaatacca
gcgggccagttgttgaaacaaagagcagcatcctgtaagaaacagtttattaataaaggc
tacagtgatgacttgatatccatcaaaatttttgagacgttgcagaaagctacagaaaag
agttctttttttaatccatttaaatggtgttttgataacttcataagctgcgacaaagtc
aacaaaataatccaaatgaaggaacaaattctttcccacttaactaataatggctgggtg
aatgaaaaagatgacttaaaccagtactccaaacgatgggctgttgttaaggcagctttg
acgtctggactttacccaaatgtcgctaggatcaatatacctactcgacaaattcaaaca
ccatatttgagtagtgcaatagtccactctaagtctgtcttgatcaataaattatccaag
aagtcaattgtcaaaggggaaactgtaccttctagttggatggtctatggcgaggcactg
agagtgggcaactctgtctgcctgtatgaaaacacattggtgtcaccattaaccatgtgc
ttatgcgtagggtcaacacctaaaaatggttctgcacacattgtaatcagagatggaggg
gatgggcaccttacctgtgttccagcagacacagaagtagagctccactttgactccttg
gtgataattagaactgacattgaattggcagttctaattacagatctcaggcgcaagtgg
gatgctgtggtagaaagacgtctgctggatccaagaagacgactcaacaaggaagaaaat
gccattctacagacagttgtcaatgtcctggtagatcaggacaaaatcctcaatctggat
caacaattgtttctaaaacctgggctttcactaaccagactcaattgtggaagaggcagg
cattccaataactga
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