KEGG   Homalodisca vitripennis (glassy-winged sharpshooter): 124369970
Entry
124369970         CDS       T09217                                 
Name
(RefSeq) collagen alpha-1(I) chain-like
  KO
K19719  collagen type II alpha
Organism
hvi  Homalodisca vitripennis (glassy-winged sharpshooter)
Pathway
hvi04512  ECM-receptor interaction
hvi04518  Integrin signaling
Brite
KEGG Orthology (KO) [BR:hvi00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    124369970
   04518 Integrin signaling
    124369970
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:hvi00536]
    124369970
Glycosaminoglycan binding proteins [BR:hvi00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   124369970
SSDB
Motif
Pfam: Collagen COLFI VWC VWC2L_2nd TILa
Other DBs
NCBI-GeneID: 124369970
NCBI-ProteinID: XP_046684160
LinkDB
Position
X:complement(145084946..145195221)
AA seq 1576 aa
MAARAVFLLILVLNLGWSVSGRVRRSQVRKTRAQESAGESATTSYEYEDYNPEYDGTVYE
EYDEANNITTPRASTTTAATSSPEDVGSRLGENLPTAPGIPASAPAAPENYNREVKPCQF
EGRFYAEGDSWNPDSCTSCSCQRGNVHCQQLESCIRGKGDECAGVVCIEKQCATQHYIPL
GECCPVCADNLDVPPGLSSRPSGYAQEGTVAEAVPVPGPRGDTGTPGDRGQPGDIGPPGS
PGNPGIPGNPGPPGPVPDVSSYYNQLALVNAGNDKGPSDAEPYMGYPDAFHYLQAQVGPA
GPRGMPGPSGSAGPQGFQGVRGEPGEPGPPGSPGIPGPRGPPGVPGKDGEQGEDGEPGTS
GSGGPPGPRGLPGMPGLPGIKGHRGFPGLDGAKGEQGQPGEKGSLGPSGPMGPIGPVGPV
GPRGERGREGPPGPPGLRGIDGIAGTPGAPGAIGKPGSPGFPGSPGAKGDQGSQGPKGSQ
GLQGPRGESGRPGISGESGLPGQPGKDGYPGEKGNPGANGIPGPPGFPGARGPPGLSGSV
GPQGPKGQQGTPGERGYKGENGMKGEGGAPGPRGLPGLQGADGKRGKRGQVGPAGPTGPV
GERGSTGPRGLPGADGAAGPKGQTGDRGPEGPQGTKGATGDSGRPGPPGLQGLRGPVGRT
GAPGKSGNPGERGIQGADGKPGDQGIQGLQGLPGPLGPPGEKGMPGEPGKDGDQGPQGSV
GPRGDPGKDGPPGIQGPPGPPGLDGERGAVGSPGPTGFQGLPGISGNPGAPGKDGEPGVQ
GPPGQSGPAGLRGERGFPGERGAVGPMGPSGQRGEPGVQGSDGAPGPPGVRGEKGHSGPL
GLVGLPGLRGMPGPPGDKGDRGSVGPMGPEGPEGRQGERGPPGPLGSQGPPGEPAERGDP
GQPGPPGEVGATGNPGERGPVGPQGLQGFPGPQGLVGLPGVKGERGLTGLKGEQGNPGPS
GSPGEQGPPGLVGLTGAKGARGEAGSRGDQGLMGPPGRPGEPGQAGQSGPTGPPGPAGVP
GIKGIPGDSGRPGNPGPMGQPGPQGLDGIKGERGGEGPPGGPGPAGPQGSPGDRGLPGLP
GSTGPPGLSGQRGAPGETGPAGKPGSDGAPGPQGVQGNPGPPGPLGEQGPEGPSGKMGPP
GISGRPGDKGPVGIPGNPGAPGAPGLMGPPGSSGPPGPAGERGQRGETGPQGVEGPIGQR
GKPGPPGPEGARGERGEVGAKGVKGHRGLNGLQGLPGLQGPPGDKGMTGPPGLPGKDGEP
GVRGTPGRDGNPGPPGVSGPHGLRGPQGEPGKDGTPGIPGPPGPPGPAGEPLGYDAAALA
ALLEQGTNKGPDPLSGDEPPRLFGNDVTEEERRALLQKAYQQLKASFERFKKPDGSKSAP
AKTCRDLSVAYPTLANGEYWLDPNEGDIKDAILVYCDMENKLTCLLPQPAASPQISHVGR
EQELWLSEIKPGFKINYKADSNQIGFLQLLSSSASQNLTYHCRNSVGYFDLQHKTYRRGL
KLLGWNDAEITPRGNIKFRYTVTEDECRARKPEWGRTTISYSTDKSLRLPITDIALRDIG
KSDQSFWLEIGMACFK
NT seq 4731 nt   +upstreamnt  +downstreamnt
atggctgcaagagctgtcttcctgctcatccttgtgttaaatctaggatggagtgtctct
gggagagtgaggcggtctcaggtgcgtaagacgcgtgcccaggagtctgcaggggagagc
gcgaccaccagctacgagtacgaagattacaacccggagtatgacggaacagtatatgag
gaatacgacgaagcaaacaatattacaactcctagagcgtcgacgacaaccgctgctact
tcatctcctgaggatgtcggcagtcgcctgggggagaacttacctacggctccaggtata
ccggcctccgctccggctgctccagaaaattacaacagagaagttaagccttgccagttc
gaaggccggttctacgccgagggcgactcctggaatcctgactcttgtacatcgtgctca
tgtcagcgggggaacgtgcactgccagcagctggagtcctgtatcagggggaaaggagac
gagtgtgctggagtagtctgtattgagaaacaatgtgccacccagcattatatcccgctg
ggagaatgctgtcctgtttgtgctgataacttagacgtaccacccgggttatcatctagg
cctagtggatacgctcaggaaggtacagtagcggaggcagtccctgttcctgggccaagg
ggagacacaggtacgccgggagacagaggacaaccaggggatatcggtcctccaggaagc
cccggcaatcctgggataccgggcaatcccgggcctccaggacccgtacctgacgtgtct
tcatactacaaccagttggcattagtgaatgcaggcaatgacaagggacccagcgacgcg
gagccatacatgggttatcctgacgcatttcactaccttcaggcccaagtaggaccggcg
gggcccagaggcatgccgggaccatcaggatctgcgggtcctcaaggatttcaaggtgtc
aggggtgagccaggagagcctggccctccaggatcccctggtatcccgggtcctaggggt
cccccaggagtgccaggaaaagatggagagcaaggtgaggatggcgaacctggaacgtca
ggatctggaggtcctccagggcctaggggccttccgggcatgccaggactcccaggcatt
aaaggccaccgtgggtttccgggtctggatggggctaagggtgaacagggccaaccgggg
gagaagggatcactagggccctcgggccccatggggcccatcggaccagtgggtcccgtc
gggcccagaggagaaagaggaagagaaggtcctccgggtcctccaggactcaggggaatc
gacggcatcgcaggaactcctggagccccgggtgcaatcggtaaaccaggatcaccagga
ttccctgggtctcccggagctaaaggagatcaaggatcgcagggtccgaagggcagtcag
ggtttacaagggcctagaggtgagtctggacgtccaggaatatccggtgagtcaggtcta
ccagggcaacccggcaaggatggatacccaggagagaagggaaatccaggggctaacggc
attccaggtcctccgggctttccaggagctcgaggaccccctggactctctggcagtgtc
ggccctcaaggccctaaaggacaacagggtacgccaggagagaggggctacaagggagaa
aatggaatgaaaggagaaggaggagcaccaggacctcgaggcttgccgggcctgcaagga
gctgatggcaagagagggaagcgtggccaggtagggcccgccggaccgactggaccagtg
ggcgagagggggtccaccgggccgaggggtctccccggggcggacggtgctgctggacct
aaaggccaaacaggagacagaggaccggaaggaccccaggggacgaaaggagccacagga
gattcaggcaggcctggtcctccaggacttcagggtctgagaggtccagtaggacgtaca
ggagcaccgggaaaatctggaaatccaggcgagcgaggaatccagggggcagatggaaaa
cccggcgatcaagggatccagggactccagggacttccaggaccccttgggccaccaggg
gaaaagggaatgccgggagaaccagggaaggatggtgatcaaggaccacaaggatcagtg
ggaccgcgaggagaccctggcaaagacggaccaccaggcatacaaggacctccaggacca
ccaggactggacggggaacgaggagctgtcggatcgcctggaccaactgggtttcaggga
ctaccaggaatatcgggaaaccctggagcaccaggtaaagatggtgagccgggagtacag
ggtcctccaggacaatcaggacccgcaggacttcgaggagaaagaggattcccgggtgag
aggggagcggttgggcctatgggaccgtcaggacaacgtggggagcctggagttcaaggc
agtgacggcgcaccgggacctcctggggttagaggtgaaaagggacattctggaccactt
ggacttgtgggcttgcccggactgagggggatgcccggccctccaggggacaaaggagat
agaggatccgtgggtccaatgggaccggaaggcccagaaggaagacaaggtgaaagagga
cctccaggtccgttggggtctcaaggacctcccggagaaccggctgagagaggggatcca
ggacaaccggggccgccgggagaagtaggtgcgacgggcaacccaggagagagaggtccc
gttggaccccaaggccttcaagggttcccagggccgcaggggttggtaggactaccaggg
gtcaagggcgaaagaggactcaccgggctgaaaggagagcaaggcaacccagggccttca
gggagtcctggggagcagggtccaccagggcttgtgggattgaccggagctaagggagcg
agaggagaggcggggtctcggggggaccagggactgatgggcccacctggacgaccgggc
gagccgggacaagcgggtcaatcaggaccaacaggacctccggggccagcaggggttcct
ggcatcaagggaatcccaggagactccggtcgacctggcaatccggggccaatggggcaa
ccgggacctcaggggttggacgggatcaagggagagcgaggaggcgagggccctcctgga
ggaccaggacccgcaggacctcagggttctcccggtgacagaggattaccaggacttcct
ggatctacaggacctcccggtctcagcggccaacggggagctccgggagaaacaggacct
gctggtaaacctgggtcggatggagctccaggaccacagggtgttcagggcaacccagga
cctccaggacctctcggcgaacaaggtcctgaaggtcccagtgggaagatgggaccccca
gggatatcaggtcggcctggagacaagggtcctgtaggaattcctggcaatcctggagca
cctggagcacctggccttatgggtcctccaggctcttcgggtcccccaggacctgctggc
gagaggggtcaaagaggagaaacaggacctcaaggagtcgagggtccgattggacaaaga
gggaagccaggacctccgggaccggaaggggccaggggtgagagaggggaggttggtgcc
aaaggagttaagggccatagaggcctgaatggacttcagggactgcccggtctgcaggga
cctcctggagacaaaggaatgacaggacctcctggattgcctggcaaggatggagaaccc
ggtgttaggggtactcctggaagagacggaaatcctggacctccgggtgtatcgggaccg
catggacttaggggaccacaaggagagccgggcaaggatgggacccccggtatccctgga
ccaccaggaccaccaggaccggctggggaaccactggggtacgacgccgcggctctggca
gcccttctggaacaggggacaaacaaaggtccggatccactcagcggggatgaaccaccg
agactgtttggcaatgatgtcacagaagaagagcgacgtgccctcttacagaaggcttat
cagcaactgaaagcaagttttgagagattcaagaaaccggatggatctaagagtgcccca
gcaaagacttgcagagacctttcagtagcctatcccaccttggccaatggtgagtattgg
ctggatcctaatgaaggagacatcaaggacgccattctggtatattgcgacatggagaac
aaactaacctgtctcctgccgcaacctgccgctagtcctcagatttcccatgtcggtaga
gagcaagagctgtggctatctgagatcaaacctggatttaagatcaactacaaggcagac
agcaaccagatagggttcctgcagttgctgtcctccagtgcttcccagaatttgacgtac
cactgccgtaactccgtgggctactttgatctacaacacaagacctaccggcgagggctg
aagctgctggggtggaatgatgctgagatcaccccacgggggaacatcaaattccgctat
accgtcaccgaggacgaatgtcgagcccggaagccagaatggggacgtactacgatcagc
tactccacggacaagtcactgaggctgcccatcaccgacatcgctctcagagacatcggc
aagtccgaccagagcttctggctggagataggaatggcctgcttcaagtag

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