Homalodisca vitripennis (glassy-winged sharpshooter): 124370424
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Entry
124370424 CDS
T09217
Name
(RefSeq) exosome complex component MTR3-like
KO
K12587
exosome complex component MTR3
Organism
hvi
Homalodisca vitripennis (glassy-winged sharpshooter)
Pathway
hvi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hvi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124370424
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hvi03019
]
124370424
Messenger RNA biogenesis [BR:
hvi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
124370424
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
AdoHcyase_NAD
Med14
Motif
Other DBs
NCBI-GeneID:
124370424
NCBI-ProteinID:
XP_046684666
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Position
1:118723875..118742814
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AA seq
293 aa
AA seq
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MPTDSRRVPGPDNTLQYYLYSKQKKTYEECEKDLLSSENIRKDGRKPETPRKIYIKTGVV
SQAKGSAYIEVGNTKVICSVFDPREIPNKSEFSVNGELYCEFKFATFSCKKRRNFVRDPE
EKELSVSLKRALEPAVCRHEFPNFQVDVYALVLQNDGSALAAAINCAGLALADASVPMYD
LVSAVSVAIHGESRLMDPTIEEENICSSVNPQVTGNRGLATLSYLGNLKQVTEFCQIGTM
DSDIVIDVIDLLETQVMEVYPVIQHSMVAKVQKHIKEKNQEPMKHSRSTAGSV
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgccaactgattccagacgtgtgccaggacctgataatactcttcaatattacttatat
tctaaacaaaaaaagacttatgaagaatgtgaaaaggacctgttgagttcagaaaatatt
agaaaggatggacgtaaaccagaaacacctagaaagatttatatcaagacgggggttgtc
agccaagctaagggctcggcgtatatcgaggtgggaaacaccaaggtgatatgctcagtg
tttgatccgagagaaataccaaacaagtccgagttcagtgttaatggtgaactctactgt
gagttcaagtttgcaactttctcttgtaagaagagaagaaattttgtgcgggacccggaa
gagaaagagcttagtgtcagtctgaagagagctttagagcccgcagtatgtaggcacgag
tttccaaacttccaagtggatgtatatgctctggtgctacagaatgacggctctgcacta
gccgctgctatcaactgtgccggactagccttggcagacgcaagtgttcctatgtatgat
ctggtcagcgctgtctctgtcgcaattcatggagagtcaaggctgatggatcctactatt
gaagaggaaaacatctgcagtagtgtaaacccacaagtaacaggaaacagaggattggcc
acactctcatatcttggcaaccttaaacaggtgacggaattctgccagatcggcacaatg
gactctgacattgttattgatgtgattgacctcctggagacccaggtgatggaggtgtat
ccagtcattcagcactccatggtagctaaagtgcaaaagcacatcaaagagaagaatcaa
gagccaatgaaacattctagatcaacagctggtagcgtgtga
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