Homalodisca vitripennis (glassy-winged sharpshooter): 124371189
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Entry
124371189 CDS
T09217
Name
(RefSeq) coatomer subunit alpha
KO
K05236
coatomer subunit alpha
Organism
hvi
Homalodisca vitripennis (glassy-winged sharpshooter)
Brite
KEGG Orthology (KO) [BR:
hvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hvi04131
]
124371189
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hvi04147
]
124371189
Membrane trafficking [BR:
hvi04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
124371189
Exosome [BR:
hvi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
124371189
Exosomal proteins of bladder cancer cells
124371189
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
TPR_COPA_B
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
WD40_Gbeta
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
WD40_RFWD3
Beta-prop_WDR41
Beta-prop_SPT8
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
Beta-prop_Aladin
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Zn-C2H2_12
GATase
Motif
Other DBs
NCBI-GeneID:
124371189
NCBI-ProteinID:
XP_046685474
LinkDB
All DBs
Position
1:127799574..127803837
Genome browser
AA seq
1221 aa
AA seq
DB search
MLTKFETKSARVKGLSFHPKRPWVLSSLHNGVIQLWDYRMCTLLDKFDEHDGPVRGICFH
NQQPIFVSGGDDYKIKVWNYKQRRCIFTLLGHLDYIRTTVFHHEYPWILSASDDQTIRIW
NWQSRTCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTVRVWDISGLRKKNVAPGPGGLD
EHLKNPSATDLFGQADAVVKHVLEGHDRGVNWACFHPTLPLIVSGADDRQIKLWRMNEAK
AWEVDTCRGHYNNVSCVLFHPRQELILSNSEDKSIRVWDMTKRTCLHTFRREHERFWVLA
AHPTLNLFAAGHDSGMVIFKLERERPAYAVHANMLLYIKDRFLRKLDFTTSKDMPIMQLR
GGGKTPVYSIGYNMAESALLVCCRNSNVDNSTYDLYSVPREHTDGHTVETAESKRSTGVT
AIWVARNRFAVLDRSHSLVIKNLKNEVTKKVDQPSCDEIFYAGTGMLLLRDPDNVTLFDV
QQKRTLAQVKISKCRYVVWSSDMSNVALLAKHTVIICNRKMEGLCSIHENTRVKSGAWDE
SGVFIYTTSNHIKYAICNGDHGIIRTLDLPIYITKVKGNQVFCLDRECRPMVLSIDPTEY
RFKLALINRKYDEVLHMVRNARLVGQSIIAYLQQKGYPEVALHFVKDDKTRFALALECGN
IEVALESARALEDKNCWERLGQAALMQGNHQVVEMCYQRTKNFDKLTFLYLITGNLDKLR
KMTKIAEIRKDLSGQYQGALLLGDVAERIKILKNCGQNSLAYLTAATHGMDEEMNALKSV
CDGNLPQVPQNARLLKPPIPIAQAETNWPLLTVSKGFFEGAIMGVGKGSAALASTALAAD
DAGGEGWGEDAELGMDDRMPGDEDPEEVAASAPEEGGGWDVGDEDVELPPDLAGSSPSVE
EGYFVAPTIGVSQSKVWATNSQLPIDHVMAGSFETAFRLLHDQVGVTEFSQFQHLFMAAF
SQSRTSYSCLPSCPSQFAYPHRNWKEAGPKGGHPAVWIKLSDLVVRLQQCYQLTTAGKFS
EAIEKLRSLLLSIPLLVVDTRQDIAEAQQLLQICREYILGLQMETTRKELPKNTLEEQKK
VCELAAYFTHCNLQPVHQILTLRTAINLFFKLKNYKSAASFARRLLELGPRPEVAAQARK
MLQACDKNLVDEHSLAYDEHNPFSICGKSYSPIYRGKPEEKCPLCGASFQPQYKGNVCNV
CGVAEIGRDVMGLRISPLQFR
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atgcttactaaatttgaaacgaaatcggctcgtgtaaagggtctttctttccaccctaaa
agaccatgggttttgtcaagtttgcataatggtgttatacagttatgggactaccgtatg
tgtacattactggacaagttcgatgaacatgatggaccagtgagaggtatatgttttcat
aaccagcaacccatatttgtatcaggaggagatgactacaaaatcaaggtatggaactat
aagcaacgaaggtgcatttttacacttctgggtcacttagattatattcgtacaactgtg
tttcatcatgaatatccatggattcttagcgcatctgatgaccaaacaatccgtatttgg
aattggcaaagtcgcacttgtatctgtgtcttaactggccataatcattatgtcatgtgt
gcacaatttcatcctacagatgacattgtggtgtctgcgtctctagatcagactgtaagg
gtatgggatatctctggcttaagaaagaagaatgtagctccaggacctggtggtcttgat
gaacatttgaaaaatccttcggcaacagatttatttggtcaggcagatgctgttgtaaaa
catgttcttgaaggtcatgatcgtggtgttaattgggcttgttttcacccaactctaccc
ttgatagtttcaggtgctgatgataggcagataaaactgtggcgaatgaatgaagcaaaa
gcttgggaagttgatacctgcagagggcactataacaatgtatcttgtgtccttttccat
ccacgtcaagaattaattttgtccaacagtgaagacaaaagcatcagagtctgggacatg
actaaaagaacttgtttacatacgttccgaagggaacatgaacgattttgggtcctagct
gctcatccaacccttaatctctttgctgcaggtcatgattctggtatggttattttcaaa
ttggaaagagaacgcccagcttatgcagttcatgctaacatgcttctttacatcaaagat
agatttctacgtaaacttgactttactacaagtaaggatatgcccataatgcaattacga
ggtggagggaaaactccagtttacagcattggatataacatggctgagagtgcacttctg
gtttgttgtcgaaatagcaatgttgataattcaacctatgacttgtatagcgttccaaga
gaacacactgatggtcatactgttgaaacagcagagagtaaacggtctacaggtgttact
gcaatttgggtagctagaaacagatttgcagttcttgatagaagtcactcattagttatc
aaaaacttgaaaaatgaagtaacaaagaaagtagatcagccttcctgtgatgaaattttt
tatgctggtacaggtatgctacttctgagagatccagataatgtcacactgtttgatgtt
caacaaaagagaaccttggctcaagtaaaaatttcaaagtgccgttatgttgtttggtca
tcggacatgagtaatgtagctttgctagccaaacacaccgttattatttgcaatagaaaa
atggagggtctttgctcaattcatgaaaatacccgagtcaagtctggagcttgggatgag
tctggcgtatttatctatactacaagtaatcatattaagtatgcaatttgcaatggagat
catggaattattcgtactctagaccttcccatatatatcaccaaggtaaagggaaatcaa
gtcttttgcttagatcgtgaatgccgtccaatggttctcagtattgacccaactgagtat
cgctttaaattagccctcatcaataggaaatatgacgaagttctacatatggtccgtaat
gcacgtttggttggccaatctattattgcatatttacagcaaaaaggctatcctgaagtt
gcattacattttgtcaaggatgataagacaaggtttgctttagctttggagtgtggtaac
attgaagttgctttagaatcggctcgtgctctagaagacaaaaactgttgggaacgactt
ggacaagctgctctgatgcaaggaaaccatcaagttgtggaaatgtgctatcaaagaaca
aagaattttgacaagctcacatttttgtatttgataactggaaacttagacaaactgcgg
aaaatgacaaaaattgcagaaattcgcaaagatctctcaggtcagtatcaaggagcactt
ctgttaggtgatgtagctgaacgaataaaaattttgaagaattgtggtcaaaactcatta
gcttatttgactgcagcaacacatgggatggatgaagaaatgaatgccttaaaaagtgtt
tgtgatggtaaccttcctcaggttccacaaaatgcccgattgctaaagccacctatacct
attgctcaagctgaaaccaactggccattgctaacggtatctaagggattctttgagggt
gcaataatgggagtagggaaagggagtgctgctcttgcaagtacagctctagctgctgat
gatgcaggtggtgagggttggggagaagatgcagaattgggaatggatgatagaatgcct
ggtgatgaagacccagaagaagttgctgcatctgcccctgaggaaggtggaggctgggat
gtaggtgatgaagatgttgaactaccacccgaccttgcaggaagttctccatctgtagaa
gaaggctactttgtggctcccactattggagtgtcccaaagcaaagtttgggcaaccaac
tcgcaactacctatcgaccacgttatggcaggtagttttgaaacagctttccgtcttttg
catgaccaagtgggagtcacagagttttcacagttccaacatctgttcatggctgcattc
agtcagtctcgaaccagttattcatgtctacctagttgtccttcacagtttgcctatcct
catcgtaactggaaagaggcaggtcctaaaggaggtcatcctgcagtttggattaagtta
agtgacttggtagttcgtttgcagcaatgttatcaacttactactgcaggaaaattttcc
gaagctatagaaaaactcagaagccttcttttgagcattcctctccttgttgtagacact
agacaagacatcgctgaagctcaacagcttttgcaaatatgtagagagtacatattgggg
ttacaaatggagactactcgtaaagaactgcccaagaatacacttgaagagcagaagaaa
gtttgtgaactggctgcttacttcacacattgcaatcttcaaccggtccatcagattttg
actcttcgcacagccatcaatctcttcttcaagctaaagaactacaaatcagcagcatca
tttgcacgccggcttttggaacttgggccacgtccagaagtagctgcacaggctcgtaag
atgttgcaagcttgtgacaagaatctagttgacgagcactctcttgcctatgatgaacat
aaccccttcagcatctgtggaaaaagctacagtccaatttaccgagggaaaccagaggag
aaatgtccactttgtggtgcttcattccagcctcaatacaagggcaacgtttgtaacgtc
tgtggtgtagcagagattggccgagacgtcatggggctgagaatcagccctttgcagttc
agataa
DBGET
integrated database retrieval system
