Homalodisca vitripennis (glassy-winged sharpshooter): 124371466
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Entry
124371466 CDS
T09217
Name
(RefSeq) LOW QUALITY PROTEIN: fibril-forming collagen alpha chain-like
KO
K19719
collagen type II alpha
Organism
hvi
Homalodisca vitripennis (glassy-winged sharpshooter)
Pathway
hvi04512
ECM-receptor interaction
hvi04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
hvi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124371466
04518 Integrin signaling
124371466
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
hvi00536
]
124371466
Glycosaminoglycan binding proteins [BR:
hvi00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
124371466
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
Motif
Other DBs
NCBI-GeneID:
124371466
NCBI-ProteinID:
XP_046685754
LinkDB
All DBs
Position
Unknown
AA seq
1338 aa
AA seq
DB search
LSLASSKAGSTPRATPGNPDSCTSCSCQRGNVQCQQLESCNQGERRRVCAGVVCIERNNV
PPSIISLWENAVPFVLSRPGGYAQEGTVAEALPVPGPRGDTGSPGDRGQPGDIGPPGSPG
NPGIPGNPGPPGPVPDVSSYYNQLALVNSGNDKGPSDAEPYMGYPDAFHYLQAQVGPAGP
RGMPGPSGSAGSQGFQGVRGEPGEPGPPGSPGIPGPRGPPGVPGKDGEQDXDGEPGTSGS
GGPPGPRGLPGMPGLPGIKGHRGFPGLDGVKGEQSQPGEKGSLGPSGPMGPIGPVGPVGP
RGERGREGPPGPPGLRGIDGIAGTPGAPGAIGKPGSPGFPGSPGAKGDQGAQSPKGSQGL
QGPRGESGRPGISGESGLPGQPGKDGYPGEKGNPGANGIPGPPGFPGARGPPGLSGSVGP
QGPKGQQGTPGERGYKGEHGMKGEGGAPGPRGLPGLQGADGKRGKRGQVGPVGPTGPVGE
RGSTGPRGLPGADGAAGPKGQTGDRGPEGPQGTKGATGDSGRPGPPGLQGLRGPVGRTGA
PGKSGNPGERGIQGADGKPGDQGIQGLQGLPGPLGPPGEKGMPGEPGKDGDQGPQGSVGP
RGDPGKDGPPGIQGPPGPPGLDGERGAVGSPGPTGFQGLPGISGNPGAPGKDGEPGVQGP
PGQSGPAGLRGERGFPGERGAVGPMGPSGQRGEPGVQGSDGAPGPPGVRGEKGHSGPLGL
VGLPGLRGMPGPPGDKGDRGSVGSMGPEGPEGRQGERGPPGPLGSQGPPGEPAERGDPGQ
PGPPGEIGATGNPGERGPVGPQGLQGFPGPQGLVGLPGVKGERGLTGLKGEQGNPGPSGS
PGEQGPPGLVGLTGAKGARGEAGSRGDQGLMGPPGRPGEPGQAGQSGPTGPPGPAGVPGI
KGIPGDSGRPGNPGPMGQPGPQGLDGIKGERGGEGPPGGPGPAGPQGSPGDRGLPGLPGS
TGPPGLSGQRGAPGETGPAGKPGSDGAPGPQGVQGNPGPPGPLGEQGPEGPSGKMGPPGI
SGRPGDKGPVGIPGNPGPPGAPGLMGPPGSSGPPGPAGERGQRGETGPQGVEGPIGQRGK
PGPPGPEGARGERGEVGAKGVKGHRGLNGLQGLPGLQGPPGDKGMTGPPGLPGKDGEISV
RGTPGRDGNPGPPGVSGPHGLRGPQGEPGKDGTPGIPGPPGPAGEPLGYDAAALAALLEQ
GTNKGPDPLSGDEPPRLFGNDVTEEERRALLQKAYQQLKASFERFKKPDGSKSAPAKTCR
DLSVAYPTLANGEYWLDPNEGDIKDAILVYCDMENKLTCLLPQPAASPQISHVGREQELW
LSEIKPGFKVSSYEGLCK
NT seq
4015 nt
NT seq
+upstream
nt +downstream
nt
ttaagccttgccagttcgaaggccggttctacgccgagggcgactcctggaaatcctgac
tcttgtacatcgtgctcatgtcagcgggggaacgtgcaatgccagcagctggagtcttgt
aatcagggggaaaggagacgagtgtgtgctggagtagtctgtattgagagaaacaatgtg
ccacccagcattatatccctttgggagaatgctgtcccgtttgtgctgtctaggcctggt
ggatacgctcaggaaggtacagtagcggaggcactccctgttcctgggccaaggggagac
acaggttcgccgggagacagaggacaaccaggggacatcggccctccaggaagccccggc
aatcctgggataccgggcaatcccgggcctccaggacccgtacctgacgtgtcttcatac
tacaaccagttggcattagtgaattcaggcaatgacaagggacctagtgacgcggagcca
tacatgggttatcctgacgcatttcactaccttcaggcccaagtaggaccagcagggccc
agaggcatgccgggaccatcaggatctgcgggttctcaaggatttcaaggtgtcaggggt
gagccaggagaacctggccctccaggatcccctggtatcccgggtcctaggggtccccca
ggagtgccaggaaaagatggagagcaagattaggatggcgaacctggaacgtcaggatct
ggaggtcctccgggacctaggggccttccgggcatgccaggactcccaggcatcaaaggc
caccgtgggtttccgggtctggacggggttaagggtgaacagagccaaccaggggagaag
ggatcactaggtccctcgggccccatggggcccatcggaccagtgggtcccgtcgggccc
agaggagaaagaggaagagaaggtcctccgggtcctccaggtcttaggggaatcgacggc
atcgcaggaactcctggagccccgggtgcgatcggtaaaccaggatcaccaggattccct
gggtctcccggagctaaaggagatcaaggagcacagagtcccaagggcagtcagggtctg
caaggtcctagaggtgagtctggacgtccaggaatatccggtgagtcaggtcttccaggg
caacccggcaaggatggatacccaggagagaagggaaatccaggggctaacggcattcca
ggccctccgggctttccaggagctcgaggaccccctggactctctggcagtgtcggccct
caaggccctaaaggacaacagggtacgccaggagagaggggctacaagggagaacatgga
atgaaaggagaaggaggagcaccaggacctcgaggcttgccgggcctgcaaggagctgat
ggcaagagagggaagcgtggccaggtagggcccgtcggaccgactggaccagtgggcgag
agggggtccaccgggccgaggggtctccccggggcggacggtgctgctggacctaaaggc
caaacaggagacagaggaccggaaggaccccaggggacgaaaggagccacaggagattca
ggcaggcctggtcctccaggacttcagggtctgagaggtccagtaggacgtacaggagca
ccgggaaaatctggaaatccaggcgagcgaggaatccagggggcagatggaaaacccggc
gatcaagggatccagggactccagggacttccaggaccccttggaccaccaggggaaaag
ggaatgccgggagaaccagggaaggatggtgatcaaggaccacaaggatcagtgggaccg
cgaggagaccctggcaaagacggaccaccaggcatacaaggacctccaggaccaccagga
ctggacggggaacgaggagctgtcggatcgcctggaccaactgggtttcagggactacca
ggaatatcgggaaaccctggagcaccagggaaagatggtgagccgggagtacagggtcct
ccaggacaatcgggacccgcaggacttcgaggagaaagaggattcccgggtgagagggga
gcggttgggcccatgggaccgtcaggacaacgtggggagcctggagttcaaggcagtgac
ggcgcaccgggacctcctggggtcagaggtgaaaagggacattctggaccacttggactt
gtgggcttgcccggactgagggggatgcccggccctccaggagacaaaggagatagagga
tccgtaggttccatgggaccggaaggcccagaaggaagacaaggtgaaagaggacctcca
ggtccgttggggtctcaaggacctcccggagaaccggctgagagaggggatccaggacaa
ccggggccgccgggagaaattggtgcgacgggcaacccaggagagagaggtcccgttgga
ccccaaggccttcaagggttcccagggccgcaggggttggtaggactaccaggggtcaag
ggcgaaagaggactcaccggactgaaaggagagcaaggcaacccagggccttcagggagt
cctggggagcagggtccaccaggacttgtgggattgaccggagctaagggagcgagagga
gaggcggggtcccggggggaccagggactgatgggcccacctggacgaccgggcgagccg
ggacaagcgggtcaatcaggaccaacaggacctccgggaccagcaggtgttcctggcatc
aagggaatcccaggagactctggtcgacctggcaatccggggccaatggggcaaccggga
cctcaggggttggacgggatcaagggagagcgaggaggcgagggccctcctggaggacca
ggacccgcaggacctcaaggttctcccggtgatagaggattaccaggacttcctggatct
acaggacctcccggtctcagcggccaacggggagctccgggagaaacaggacctgctggt
aaacctggatcggatggagctccaggaccacagggtgttcagggcaacccaggacctcca
ggacctctcggcgaacaaggtcctgaaggtcccagtgggaagatgggacccccagggata
tcaggtcggcctggagacaagggtcctgtaggaattcctggcaatcctggaccacctgga
gcccctggccttatgggtcctccaggctcttcgggtcccccaggacctgctggcgagagg
ggtcaaagaggagaaacaggacctcaaggagtcgagggtccgattggacaaagagggaag
ccaggacctccgggaccggaaggggccaggggtgagagaggggaggttggtgccaaagga
gttaagggccatagaggcctgaatggacttcagggactgcccggtctgcagggacctcct
ggagacaaaggaatgacaggacctcctggattgcctggcaaggatggagaaatcagtgtt
aggggtactcctggaagagacggaaatcctggacctccgggtgtatcgggaccgcatgga
cttaggggaccacaaggagagccgggcaaggatgggacccccggtatccctggaccacca
ggaccagctggggaaccactggggtacgacgccgcggctctggcagcccttctggaacag
gggacgaacaaaggtccggatccactcagcggggatgaaccaccgagactgtttggcaac
gatgtcacagaagaagagcgacgtgccctcttacagaaggcttatcagcaactgaaagca
agttttgagagattcaagaaaccggatggatctaagagtgccccagcaaagacttgcaga
gacctttcagtagcctatcccaccttggccaatggtgagtattggctggatcctaatgaa
ggagacatcaaggacgccattctggtatattgcgacatggagaacaaactaacctgtctc
ctgccgcaacctgccgctagtcctcagatttcccatgtcggtagagagcaagagctgtgg
ctatctgagatcaaacctggatttaaggttagttcctatgaaggattatgcaaaa
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