Homalodisca vitripennis (glassy-winged sharpshooter): 124372083
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Entry
124372083 CDS
T09217
Name
(RefSeq) LOW QUALITY PROTEIN: cleavage and polyadenylation specificity factor subunit 4-like
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
hvi
Homalodisca vitripennis (glassy-winged sharpshooter)
Pathway
hvi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hvi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124372083
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hvi03021
]
124372083
03019 Messenger RNA biogenesis [BR:
hvi03019
]
124372083
Transcription machinery [BR:
hvi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
124372083
Messenger RNA biogenesis [BR:
hvi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
124372083
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_3
zf-CCCH_2
zf-CCCH_4
zf-CCHC
zf-CCCH_10
Nab2-like_zf-CCCH_
Motif
Other DBs
NCBI-GeneID:
124372083
NCBI-ProteinID:
XP_046686405
LinkDB
All DBs
Position
Unknown
AA seq
284 aa
AA seq
DB search
MEFIVASVENMKFNIEIALEEQHGALPLPFPGMDKSIAGVCEFFPKGTCIKGTACPLRHV
KGDRTIVCKHWLRGLCKKGDLCEFLHEYDMTKMPECYFYSRFNACHNKECPFLHIDPESK
IKDCPWYDRGFCRHGPNCRHRHVRRVLCMNYLAGFCTDGPDCKYMHPRFELPATDVMQKE
GKKVVIVCHFCGESGHKAIYCHKMPQEMKDAEAKQPTKTTQLITKTGEDGKEIVVAVKPT
LKPLEEVTCFKCGCKGHYANKCPKGHLAFLALSQNQNAPPPYKR
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggaatttatcgtagcaagtgtggaaaatatgaagtttaacattgaaatagccttagaa
gaacaacatggagcattgcctctaccttttcctggaatggacaaatcaattgctggagtg
tgtgaatttttccccaaaggaacttgtatcaaaggaacagcttgccctctgcgacatgtc
aaaggagatcgaactatcgtgtgtaaacattggctcagagggctctgtaagaaaggagat
ctttgtgaatttctccatgaatacgacatgacaaaaatgcctgagtgttacttctattcc
agattcaatgcttgtcacaacaaggagtgtccattccttcacatcgaccccgaaagcaag
atcaaagactgtccatggtatgaccgaggtttctgccgccatggacccaactgccgacac
cggcatgtgcggagggtgctgtgcatgaactatcttgctggattttgcacagatggacct
gattgtaaatatatgcatccaaggtttgagctgccggcaacagatgtcatgcagaaggaa
ggcaagaaggtggtgattgtctgtcacttctgtggagagtcaggacacaaggccatctac
tgtcataagatgccacaggagatgaaggacgcagaagctaaacaaccgactaaaacaact
caattgatcaccaagacaggagaagatggcaaggaaattgttgttgctgtcaaacctaca
ttgaaacctctggaagaagtcacatgctttaagtgtggatgcaaaggtcactatgcaaac
aaatgccctaaaggacatctcgctttcctagccctaagtcaaaatcagaacgccccgccg
ccatacaaaagataa
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