Homalodisca vitripennis (glassy-winged sharpshooter): 124373256
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Entry
124373256 CDS
T09217
Name
(RefSeq) pre-mRNA-splicing factor Slu7
KO
K12819
pre-mRNA-processing factor SLU7
Organism
hvi
Homalodisca vitripennis (glassy-winged sharpshooter)
Pathway
hvi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hvi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124373256
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hvi03041
]
124373256
Spliceosome [BR:
hvi03041
]
Complex C
Other components
Step II factors
124373256
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Gene cluster
GFIT
Motif
Pfam:
Slu7
SR-25
IMUP
SDA1_HEAT
zf-CCHC_4
FAM199X
Motif
Other DBs
NCBI-GeneID:
124373256
NCBI-ProteinID:
XP_046687599
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Position
1:145622153..145649606
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AA seq
584 aa
AA seq
DB search
MAATVNLTVSEILRSKASSEDEPKKKSREDWRKAKELEEARKAGTAPAAVDEEGRDINPH
IPQYISAAPWYFSSQGPTLKHQRIQPESVKKPTPIDLWYKRGVNTEVKHTKYRKGACENC
GALTHKRKDCMERPRKVGAKYTNAEIAPDEFVQPVIDADYDGKRDRWAGYDPAQHRTIVE
QYHKIEEAKRQLRAEKLNAAGEGQGNELDDEEDEDKYVDEVDMPGTKVDSKQRITVRNLR
IREDTAKYLRNLDPNSAYYDPKTRSMRDNPHEDLAKQGEEIDYGGENFVRWTGDTRKHAK
AQLFAWEAYEKGVDVHLLAEPTKLELLQKDYEQKKEQFKDRVQQDVLERYGGGEHLQAPP
KQLLLAQTEDYVEYSRYGKVIKGQEKSIARSKYEEDVFPNNHSSVWGSYWHNGAWGYKCC
HSFIKGSYCTGEAGKIAGADLPLPSEVDKTITKTADSSSGEESSSSSSSSSSSSSSSESE
SEAEEKKKGTSSKKKKKNKKKLRKEKLRQKRKEKKKEESSEDKLKAALKRVDEEREAADR
LLNMDERKRPYNSMFDVKKPTDEEMEAYYMKRKREDDPMAYFKS
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaccgtaaacttaacagtttcagaaattctcagaagcaaagcttcatcggaa
gatgaaccaaagaaaaagtccagagaagactggagaaaagcaaaagagttggaagaagca
agaaaggctggaacagcccctgcagcagtggatgaagagggaagagacatcaatcctcac
attccccagtacatctcagcagctccctggtacttcagcagtcagggacccaccctcaaa
catcagcggatacagccagagagtgtcaagaaacccacccccatagacctatggtacaaa
aggggtgttaatactgaagtgaaacataccaaataccgtaaaggggcctgtgagaactgt
ggcgcactgacacataagcgcaaggactgcatggaacgtccacgcaaggtcggggccaag
tataccaatgcggagatagcacctgatgaatttgtgcagcctgtaattgatgctgactat
gatggcaagagggaccgctgggctggttatgatcctgcacaacaccgtaccatcgttgaa
cagtaccacaagatagaagaggccaagcgacaacttcgagcagagaagttaaatgctgct
ggagaaggacaaggaaatgaattggatgacgaagaagatgaagataaatatgtagatgaa
gtagatatgcctggaactaaagttgacagtaagcagagaattacagttaggaatctgaga
atccgagaagacacagcaaaatatttacgcaaccttgatcctaattcagcctactatgat
ccgaaaactcgttccatgagagacaatcctcacgaggacttggccaaacaaggagaagaa
attgactacggtggggagaactttgtgcggtggacgggtgacacacgcaaacacgccaag
gcacagctcttcgcatgggaagcgtacgagaagggtgtagatgtacacttgctagccgaa
cccacgaaacttgagctactgcagaaggactatgagcagaagaaagaacagttcaaggac
cgggtgcagcaggatgtgctggagcgctacggaggcggagagcatctgcaggcaccaccc
aaacagcttctgctggcacaaactgaggattatgtggagtactcccgctatggcaaggtc
atcaagggtcaggagaagagcattgctagatccaaatatgaggaagatgtattccccaac
aaccactcctctgtctggggctcatactggcacaacggggcatggggatataagtgctgt
cattccttcatcaagggttcatattgcactggagaggctggcaagatagctggtgctgat
cttcctttgccatcagaagttgataaaactataactaaaactgctgattcaagttcaggt
gaagaaagttcttcttcgtcatcttcatcatcatcgtctagttcgtccagtgaatctgaa
agtgaagcagaagagaagaagaagggaacttcatcgaagaaaaagaagaaaaataaaaag
aagttacgaaaagaaaaattgagacagaagaggaaagaaaagaaaaaagaagaatcctca
gaggataaactaaaagcagctctgaaacgagtggacgaggagcgagaggcagcagatcgt
ttgttgaacatggacgagaggaagaggccgtataacagcatgtttgatgtcaagaagcct
actgatgaagagatggaggcttattacatgaaacgaaagcgagaggatgatcctatggct
tattttaagagttga
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