KEGG   Homalodisca vitripennis (glassy-winged sharpshooter): 124373956
Entry
124373956         CDS       T09217                                 
Name
(RefSeq) exosome complex component CSL4-like
  KO
K07573  exosome complex component CSL4
Organism
hvi  Homalodisca vitripennis (glassy-winged sharpshooter)
Pathway
hvi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hvi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    124373956
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hvi03019]
    124373956
Messenger RNA biogenesis [BR:hvi03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     124373956
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     124373956
SSDB
Motif
Pfam: EXOSC1 ECR1_N RRP4_S1 ECR1_N_2
Other DBs
NCBI-GeneID: 124373956
NCBI-ProteinID: XP_046688221
LinkDB
Position
Unknown
AA seq 195 aa
MEGKDLICIPGQRLCLADSTHSVGSGTYERQGYIYSSQTGVVHVIKQEKGNIIEVRSIND
QSIVPAPGNIVTAKVMVVNQRFAKCLITCIGDTVLTRPYRGILRKEDVRSFEKDRVEMYK
CYRPGDIILARILPISEMHTYQLTTAENELGVVIAYSEAGVALIPISWTCMQCPKTYNKE
ERKVAKVVPEKIILD
NT seq 588 nt   +upstreamnt  +downstreamnt
atggaaggcaaagatcttatttgtataccaggtcagcgtctttgtctagcagacagcaca
cattctgtgggctccggcacatatgagcgtcaaggatacatttactcttcacaaaccggt
gtcgttcatgttatcaagcaagagaagggaaacatcattgaagtaagaagtatcaatgat
caaagtatagtgcctgctccgggcaatattgtaacagccaaagtgatggttgtcaatcag
aggtttgccaagtgcctgatcacttgtattggagacactgtcttgacgaggccgtaccga
ggcatactgcggaaggaggatgtccgcagcttcgagaaggaccgagtggaaatgtacaag
tgctatcgacctggtgatatcatcctggcaagaattttaccgatttcagaaatgcacact
taccaactgacgacagctgagaatgagttgggtgttgttatagcatatagtgaagcaggt
gtagcattgattcctataagctggacttgtatgcagtgtcctaagacttacaacaaagaa
gagaggaaagttgccaaagtggttcctgaaaaaattatccttgattga

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