Homalodisca vitripennis (glassy-winged sharpshooter): 124375107
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Entry
124375107 CDS
T09217
Name
(RefSeq) ATP-dependent RNA helicase p62-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
hvi
Homalodisca vitripennis (glassy-winged sharpshooter)
Pathway
hvi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hvi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124375107
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hvi03041
]
124375107
03009 Ribosome biogenesis [BR:
hvi03009
]
124375107
Enzymes [BR:
hvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124375107
Spliceosome [BR:
hvi03041
]
Complex A
U1 snRNP components
U1 related factors
124375107
Complex B
124375107
Ribosome biogenesis [BR:
hvi03009
]
Eukaryotic type
Pre-60S particles
Helicases
124375107
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
124375107
NCBI-ProteinID:
XP_046689175
EnsemblRapid:
LOC124375107
LinkDB
All DBs
Position
Unknown
AA seq
563 aa
AA seq
DB search
MESRWDKDNNFPSLDSRYMGEQAVLLPSYNNQNGSNSRPSYGSGRPGGKFGGGSGSGGRF
ASKTGGGGGGGRFGGNSGRGGGGGSFKDKQPGGGLRKPEWDFNSLSPFAKDFYNPHPNVV
NRPFNEVQHFLTSKEITIKGRAPKPIQFFEEANFPEYIMEEVRKQGFDFPTAIQAQGWPI
AMSGMNMVGVAKTGSGKTLAYVLPACVHINNQEPLKRGDGPIALVLAPTRELAQQIQTVA
RDFGSSTFVRSTCIFGGAPKGPQARDLMRGVEIVIATPGRLIDFLEQGQTNLKRCTYLVL
DEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKEVRKLAEDFLHDYIQINIGSLEL
SANHNIVQIVNICRDTEKDEKLSTLLQELSEEEGKTIVFAETKRKVDAITRTIQRGGWRA
MGIHGDKNQNERDYVLREFRKSSAGILVATDVAARGLDVDDVKYVINYDYPNSSEDYIHR
IGRTGRSDQTGTAYTFFTPNNSRQAKDLVNVLQEARQEVDPELNKMAMRGGGGGGNWRGN
NKWGYQRNRNFGGSNSHKKFNEY
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggagagcaggtgggacaaagataacaatttcccgtccttggactcgagatatatgggt
gagcaggctgtgttattgccgtcttataataaccaaaacggatcaaatagtcgaccaagc
tatggcagcggaagaccaggtggcaaatttggaggaggaagcggtagtggaggacggttt
gctagcaaaactggaggaggtggtggtggtggcagatttggtggaaactctggcagagga
ggcggtggtgggagtttcaaggacaagcagcctggcggtggactgaggaagccagaatgg
gatttcaacagcctgtctccgtttgcaaaggacttctacaatccacaccccaatgttgtc
aaccgacctttcaatgaagtgcagcattttcttacaagcaaagagatcaccattaaagga
agagctcccaagcccattcagttctttgaagaggccaactttccagagtacataatggaa
gaagtcaggaagcaagggtttgacttccccactgcaattcaagcccaagggtggcctatt
gcgatgagtggaatgaacatggtgggtgtggcaaagacgggatcagggaagactttggca
tacgtgctaccagcctgtgtacacatcaacaatcaagagccattgaagcgaggggatggt
cccatagccttggtgttggctccaacgagagagttggctcaacagattcagacagtggct
cgggactttggctcttcgacatttgtccgcagcacttgcatcttcggaggagcccccaag
ggaccacaggctcgcgacctgatgcgtggtgtggagattgtgattgctactcctggtcgg
ctcatagacttcctagaacagggccagaccaatctgaagcgctgtacctacttggtgttg
gacgaggcagatcgcatgttggacatgggctttgagccacagatccggaagatcattgaa
cagatcaggccggacagacaggtgctgatgtggtcggcgacttggcccaaagaagtgcgg
aagttggctgaggattttctccacgattatatccagataaacatcggctccctggaactg
tcagccaaccacaacattgtacaaattgtcaacatttgtcgagatacagaaaaagatgag
aagttgagtacactgttacaagagctcagtgaagaagaaggaaagaccattgtatttgcc
gagaccaagaggaaagtagacgcgatcaccagaacaatccagcgaggcgggtggcgtgca
atgggtattcatggagacaagaaccaaaatgaaagagattatgtgttacgagagttccgt
aaatcatcagcgggaattctggtggcaactgacgttgctgcccgaggtctagatgttgac
gatgtgaagtacgttatcaactatgactaccccaactcgtcagaggactacatccaccgt
atcggacgcacggggcggtccgaccagacaggcacggcgtacacattcttcacaccgaac
aactcccgccaagccaaggaccttgtcaacgtcttgcaggaggcgagacaggaggtggac
ccagaactcaacaagatggcgatgcgaggtggaggtggcggaggcaactggagaggtaac
aacaaatggggctaccagcgcaacagaaactttggaggctctaactcacacaagaagttc
aatgaatactaa
DBGET
integrated database retrieval system
