KEGG   Hymenobacter volaticus: MUN86_03230
Entry
MUN86_03230       CDS       T09412                                 
Name
(GenBank) RtcB family protein
  KO
K14415  tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
Organism
hvl  Hymenobacter volaticus
Brite
KEGG Orthology (KO) [BR:hvl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:hvl03016]
    MUN86_03230
Enzymes [BR:hvl01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.8  3'-phosphate/5'-hydroxy nucleic acid ligase
     MUN86_03230
Transfer RNA biogenesis [BR:hvl03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing ligase complex
    MUN86_03230
 Prokaryotic type
   tRNA splicing ligases
    MUN86_03230
SSDB
Motif
Pfam: RtcB
Other DBs
NCBI-ProteinID: UOQ68438
UniProt: A0ABY4GC11
LinkDB
Position
complement(729224..730306)
AA seq 360 aa
MPDAHQGYGLPIGGVLAVDNAVIPYGVGMDIGCRMALSVFDLPAHYLEQRTQELKKLLHN
HTRFGNKEVFKNPANDPVLDRPEFKEIPVVKGKREAAINQLGSSGSGNHFVEWGIVDITI
EDNDLDLPLGKYMGLLSHSGSRGLGAAIAQHYTKIAMSKCPLPPEARYLAWLGLDSQEGQ
EYWRAMNLAGDYASACHHDIHRRLSLALGAKPVAKVENHHNFAWKETLPDGREAIVHRKG
ATPAGQGVLGVIPGSMTAPGFIVRGRGERDSIQSASHGAGRRMSRTQAKQNISEGDLRRH
LRDQGIELIGGGLDEAPMAYKDIHQVMAHQRDLVNVLGSFTPRIVRMDAGGGSKSRYGGE
NT seq 1083 nt   +upstreamnt  +downstreamnt
atgcccgatgcgcaccaaggctatggcctgcccattgggggcgtgctagccgtcgataat
gctgtgataccctacggcgtaggtatggatatcggctgccgcatggccttgtcggtgttt
gatttgccggcgcactatctggagcagcgcacgcaggagctgaaaaagctgctgcacaac
cacacgcgtttcggcaacaaagaagtgtttaagaacccagccaacgacccggtgctagat
cggccggaattcaaggaaataccggtggtgaagggcaagcgcgaagccgccatcaaccag
ctaggctcctctgggtcgggcaaccattttgtggagtggggcatagtggacattaccatc
gaagacaacgacctggacctaccactcggcaagtatatggggctgctctcacacagcggg
tcgcgggggctaggggccgccattgcacagcattacaccaaaatagccatgagcaagtgc
ccactaccgcccgaggcgcgctacttggcttggctgggcctcgatagccaggaaggacag
gaatactggcgcgccatgaatctggctggcgactacgcttccgcctgtcaccacgatatt
caccggcgcctaagcttggccttgggggcaaagccggtagcaaaggtggaaaaccatcac
aacttcgcttggaaagagaccctacccgatggccgcgaagctattgtacaccgcaaaggc
gccacgccggccggccaaggtgtactcggcgtgattccggggtctatgacggcacccggg
tttattgtgcggggccggggcgagcgggattccattcagtcggcttcgcacggggccggg
cgtagaatgtcgcgcacgcaagccaagcagaacatatcggagggcgaccttcgccgccac
ctccgcgaccaaggcatcgaactcattggcggcggcctagatgaagcaccgatggcctac
aaagacattcatcaggtaatggctcaccagcgcgatttggtgaatgtgctaggctcgttc
acgccccgcatcgtgcgtatggacgccggcggtggcagcaaaagcaggtacggcggcgaa
taa

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