Hymenobacter volaticus: MUN86_07005
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Entry
MUN86_07005 CDS
T09412
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
hvl
Hymenobacter volaticus
Pathway
hvl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hvl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MUN86_07005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hvl03019
]
MUN86_07005
03400 DNA repair and recombination proteins [BR:
hvl03400
]
MUN86_07005
Enzymes [BR:
hvl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MUN86_07005
Messenger RNA biogenesis [BR:
hvl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MUN86_07005
DNA repair and recombination proteins [BR:
hvl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MUN86_07005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
TFIIE_alpha
FeoC
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
UOQ67610
LinkDB
All DBs
Position
1615117..1617036
Genome browser
AA seq
639 aa
AA seq
DB search
MPVPTDDILHVLNQTWGHMAFRPLQEDIIRTVLAGQDVLALLPTGGGKSICFQVPALARD
GLCLVISPLIALMKDQVENLRKRGIKAEAVYAGMSHQEIDQTLDNCVYGPVKFLYVSPER
LLTDMFRARVGKMKVSLLAVDEAHCLSQWGYDFRPPYLRIAELRELLPGVPCIALTATAT
EKVRQDIVENLRFRSGYQVFQQSFARPNLSYSVLATEDKLRRLLEVVRGVGIGKTSIVYA
RTRRQTEDTAAYLQQHGLRAAAYHAGLLSDQRTRIQQDWMQNKVHCIVATNAFGMGIDKP
DVRLVVHLEAPDTLEAYYQEAGRAGRDEKYAFAVLLEGPNDADELRRRTQQAYPPLDTVR
RVYQALANYSRTAVGGGELVAFDFDIQQFAETYRIKALEAHNSLRTLAREGYVLLNEAVN
DPARVYIPIDHTDLYRFQVANAQHDQLIKSLLRFHGGELFAGFQRISENSLAQHLKMSVT
DLRKMLLFLHRSGIIQYQPRHDSPQAQFTTPRFDADKLPLDQKRLLQARELATRKTESVI
QYVTGGRCRQQLLLEYFGELNAPACRVCDFCLARKKAKQDAVAPASLREQLLTLLRTTPQ
TPREVLAHFAPGQATSITEQLRELVELGELRYAPDGRLQ
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
ttgcctgtacccaccgacgatatactgcacgtactgaatcagacgtgggggcatatggcg
tttcggccgttgcaggaagacatcatacggacggtattagccggtcaggatgtactagct
ttgttgccaactggtggaggaaagagcatctgctttcaagtacccgctctggctcgcgac
ggattatgcctagtcatatcgccgctgattgcgctaatgaaggatcaggtggaaaaccta
cgcaagcgtggcatcaaagccgaagccgtgtacgcgggcatgagccaccaggaaatcgac
cagacactggacaactgcgtgtacgggccggtgaagtttctgtacgtatcgccggaacgc
ttactgacggatatgtttcgggcccgagtgggcaagatgaaagtaagcttgctcgccgtc
gacgaagcgcactgcctttcgcaatggggatacgattttcggcccccttatctgcgaatt
gcggaattaagggaactgctgccgggagtgccctgcattgccctcacggcaacagctacc
gagaaagtgcggcaggatatagtcgaaaatctacgttttcggtccggctatcaggtattt
cagcagagcttcgctagacccaatctgtcgtattcggtactagccacagaagacaaactg
cgtcgcctgctggaagtggtgcgcggcgtaggaataggaaagaccagcatagtgtacgcc
cgtacccgccgccaaaccgaagacaccgctgcctacttgcagcagcacggtctgcgggct
gctgcgtaccatgcaggcttgcttagcgaccaacgcacccgcattcagcaggactggatg
caaaacaaagtgcattgcattgtggccaccaacgcgtttggcatgggcatcgacaagcct
gatgtgcgcttggttgtgcacttagaggctcctgataccttggaagcatactaccaggaa
gcaggccgggccggccgcgacgaaaagtatgcctttgccgtgctcctcgaagggcctaat
gatgccgacgagctgcgccgccgcacccagcaggcctatccgccactcgatacggtacgc
cgcgtgtaccaagcccttgccaattactcgcgcacggcagttggcggcggcgaattagtg
gccttcgattttgatattcagcagttcgcagaaacctaccgaatcaaggcgctggaagca
cacaatagcctgcgcaccttggcgcgtgaaggatacgtgctgctcaacgaggccgtcaac
gacccggcccgggtctacatccccatcgaccacactgacctctaccgttttcaagtggcc
aatgcccagcacgatcaactaatcaagagcttattgcgctttcacgggggcgaattattc
gcaggctttcagcggatttccgaaaacagccttgctcagcacctgaagatgagcgtaacg
gatctgcgcaagatgctcttgtttctacaccgctcgggcattattcagtaccaaccccgc
cacgattcaccgcaggcgcaatttactacgccccgcttcgatgccgataagctcccgctc
gaccaaaagcgtctgcttcaggctcgcgaacttgctacgcgaaaaactgagtcagtcatc
cagtacgttaccggcgggcgttgccgccagcagcttctgctcgaatatttcggtgagttg
aatgcacccgcgtgccgggtctgcgacttttgcttagccaggaagaaagcaaaacaggat
gcagtagctccggcgtcgctacgcgaacagcttctaacgctgcttcgcaccacgccgcaa
acgccccgcgaagtacttgcccatttcgcgcctggccaagccacttccataaccgagcaa
ctgcgggaactagtagagctaggggagttgcgttacgcgcccgatggccgtttgcaataa
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