Hymenobacter volaticus: MUN86_09435
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Entry
MUN86_09435 CDS
T09412
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hvl
Hymenobacter volaticus
Brite
KEGG Orthology (KO) [BR:
hvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hvl03032
]
MUN86_09435 (topA)
03400 DNA repair and recombination proteins [BR:
hvl03400
]
MUN86_09435 (topA)
Enzymes [BR:
hvl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MUN86_09435 (topA)
DNA replication proteins [BR:
hvl03032
]
Prokaryotic type
DNA Topoisomerases
MUN86_09435 (topA)
DNA repair and recombination proteins [BR:
hvl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MUN86_09435 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
PadR
Motif
Other DBs
NCBI-ProteinID:
UOQ68046
LinkDB
All DBs
Position
complement(2201492..2203993)
Genome browser
AA seq
833 aa
AA seq
DB search
MVKNLVIVESPAKAKTIEGYLGKDYVVKSSFGHVRDLPKDNNAIDIANGFKPTYVVSADK
REIITQLKKLAKEAETVWLASDDDREGEAISWHLAETLNLSGTDKTRRIVFREITKNAIL
NAIATPREIDLNLVNAQQARRVLDRLVGFELSPVLWKKVKAGLSAGRVQSVAVRIVVERE
REINQFKVSSAYRVTARFDAGRGAVLEAELPTRFKTRDEAEAFLARCVGADYRIENLEKK
PGKRSPAPPFTTSTLQQEASRKLGFSVAQTMSVAQKLYEAGKISYMRTDSVNLSQDALDA
ARVEISRAYGPEYAQTRVYKTKSASAQEAHEAIRPTDFALAKAGSDSQEQRLYDLIRKRA
MASQMADAVIERTVASIGISTQPGVLLTATGEVITFEGFLKAYAESKDEEELDEANNTDS
SFSRGLPPLSVGQQLPLQLLRAMERFASPPARYTEASLVKKLEEMGIGRPSTYAPTISTI
QKRGYVEKDSREGKERKFHVLTLDGSEVKTEVKTETFGADKAKLFPTDTAMVVNDFLVEH
FPVIVDFQFTAKVEDEFDQIANGHELWTDMLSGFYSTFHATVERGQDIERSTLGSTRVIG
IHPETGQKLTARLGRYGPYVQIEPKEGAPEGEKAVYASLRKGQFIENITLEEALDLFKLP
RIVGQYEDKDMTAALGRFGPYIRHDSKFYSLTKEQDPHTITATEAIELIENKRKTDAERL
IKEFPENPDVQVLNGRFGPYIVAGKKNVKIPKGEEPAGLTLERCLELAAATPDKPAKGGR
FAKKTAPEADAADAADKPAKKKPAATAKKPAAKKPAAKKAAGTTAKKATAKAK
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaaaacctagtcatcgtcgagtcgcctgccaaagccaaaaccatagaaggttac
ttgggcaaagactatgtcgttaagagttccttcggccacgtccgcgacctgccgaaggac
aataatgctattgacatagccaatggcttcaaacctacctacgtggtatcggccgacaag
cgagagataatcacgcagcttaagaagttagcgaaggaagcggaaaccgtatggttagcg
agtgacgatgaccgggaaggcgaggcaatttcctggcacttggccgaaacgcttaaccta
agcggcaccgacaaaacgcgtcggattgtgtttcgtgaaatcactaagaacgccattctc
aacgctattgccaccccgcgggaaatcgacctaaacctggtaaatgcgcagcaagctcgc
cgcgtactcgaccgactggttggcttcgagttgagcccggtactttggaaaaaggtgaag
gctggtttatcggcgggccgcgtgcaaagcgtggccgtgcgcattgtggtggagcgggaa
cgagaaatcaaccagttcaaagtatcgtcggcgtaccgcgtaacggcgcgcttcgatgcg
ggccgcggggcggtgctagaggctgagcttccaacccgtttcaagacgcgggatgaggca
gaagccttcctggcccgctgcgtaggcgccgattatcgcattgaaaacctcgagaaaaag
ccaggcaagcgcagccctgcgccgccgtttactacgtctactttgcagcaggaagcctcg
cgtaagctgggattttcggtagcgcagacgatgagtgtagcacagaagctatatgaagcc
ggcaaaatcagttacatgcggactgactcggtgaacctctcgcaggacgctcttgatgcg
gctcgtgtagaaattagccgtgcctacggtcctgaatacgcacaaactcgcgtttataaa
acaaagtcagcctccgcacaggaagcccacgaagctattcgccccaccgattttgcgttg
gctaaagcggggtccgattcgcaagagcaacggctctacgacctgatccggaagcgggct
atggcttcgcaaatggcggatgcggtgattgagcgcacggttgccagcatcggtattagc
acgcagccaggtgtattactgacggctacaggcgaggttattacgtttgagggcttcttg
aaagcatacgcggagagcaaagacgaagaagaactcgacgaagcaaacaatacagattcg
tcgttctcacgcggcttgccgcccctgagcgttggccagcagttgcctttgcaactgctg
cgggctatggagcgctttgcgtcgccacccgctcgctacactgaggcttcgcttgtgaag
aagctggaagagatgggaattggccggccatctacctatgctccgaccattagcaccatt
cagaagcggggctacgtggagaaggactcgcgtgaaggcaaggagcgcaagttccatgtg
ctaacactcgacggaagtgaggtgaaaacggaagtgaaaactgaaactttcggcgccgac
aaggccaagctcttccccactgacacggccatggtagtcaatgacttcctggtagagcac
ttcccggttatcgtcgacttccagtttacggcgaaggtggaagatgaattcgaccagata
gccaacggccatgagttgtggacggatatgctgtcgggtttctacagcaccttccatgct
accgtggagcgcggccaggatatcgagcgtagtaccttgggcagcacccgcgtcattggc
attcaccccgaaacgggccaaaagcttacggcacgtttgggtcgctatggtccatacgtt
cagatcgagccgaaagaaggcgcgcctgaaggagaaaaagcagtatatgccagcttgcgc
aaaggccagttcatcgagaacatcacgctggaagaggccctagatttgtttaagctgccg
cgcattgtgggtcagtacgaagacaaggatatgacggctgctttaggacgctttggcccc
tatatccgccacgacagcaaattctactcgctcactaaggagcaggacccgcacaccata
acggcgactgaggctatcgaactgattgagaacaagcgcaagacagatgcagagcgactc
attaaggagttccccgaaaatccagatgtgcaggttctgaacggccgctttggtccctac
atcgtggcaggtaagaagaacgtgaaaattccgaaaggcgaagagccggccggcctcaca
ttagagcgttgcttggaactagctgctgctactcccgacaaacccgccaaaggtggccgt
ttcgccaaaaaaaccgctcctgaagccgatgcagccgacgcggcagataagccagccaag
aagaaacctgctgctaccgctaagaagcccgctgcgaaaaaacctgctgccaagaaagct
gctggtaccaccgctaaaaaagctacggcaaaagcgaaatag
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