Hymenobacter volaticus: MUN86_10860
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Entry
MUN86_10860 CDS
T09412
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hvl
Hymenobacter volaticus
Brite
KEGG Orthology (KO) [BR:
hvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hvl03032
]
MUN86_10860
03400 DNA repair and recombination proteins [BR:
hvl03400
]
MUN86_10860
Enzymes [BR:
hvl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MUN86_10860
DNA replication proteins [BR:
hvl03032
]
Prokaryotic type
DNA Topoisomerases
MUN86_10860
DNA repair and recombination proteins [BR:
hvl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MUN86_10860
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
XRCC4
Motif
Other DBs
NCBI-ProteinID:
UOQ68301
LinkDB
All DBs
Position
2501540..2502670
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AA seq
376 aa
AA seq
DB search
MSTIAQPRPKTKKKRLAPLEDSHELYKDPARQAELAGLRYRTDTKPALTRQPGPDGTFTY
HKANGELITDEKTLERIKSFVIPPAWTDVWISDTANSHLQVTGRDAKGRKQYRYHVAWDQ
ARSLTKFSRLRAFGEKLADLRRQMQKDLARPELDKAKVMALVLTLMDRSYIRIGNKEYAK
ENKTYGLTTLRDKHVQVTGSDVRFAFVGKKGVAHDLTIHDRKLARLVQKCKEIPGQHLFQ
YYTPDGKRAELESGDVNEYLQQVTGLALSAKDFRTWGGTVKMVECLETVINEEPDFPKPK
SLKRALQDVAHELGNTPTVCSKYYIHPQVVELFNTDKLIDYLRRHDADPSENDLLTPTEH
MVLDMLAELEGDAVKQ
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgtctactattgcccagccgcggcccaaaaccaagaagaagcgcctcgcgcccctagaa
gattcgcacgagctatacaaagaccccgctcggcaggccgaattggcgggcttacgctac
cgcaccgataccaaacccgcccttacgcgccagcccggccccgacggtacgttcacttat
cacaaagccaacggcgaactaataaccgacgagaaaaccttggagcgtatcaaaagcttc
gtgattccgccagcctggactgacgtttggatttccgatacggccaacagccacttgcaa
gtaaccgggcgcgatgccaaaggccgcaagcagtaccgctatcatgttgcctgggaccaa
gcgcggagccttaccaagttcagcaggttgcgtgctttcggcgaaaagttagccgacctg
cgccggcaaatgcaaaaagacttggctcgcccggaactcgataaagccaaagtaatggct
ttggtactcacgctcatggaccgttcttatatccgcattggcaacaaagagtacgctaag
gaaaacaaaacctacggcctcaccaccctccgcgacaaacacgtgcaggtaactggctcc
gatgtgcgatttgcgtttgtgggtaagaaaggggtagcccacgacctcaccattcatgac
cggaagctggcccggctggtgcagaagtgtaaggagataccaggccagcacttgtttcag
tattacactcccgatggcaaacgggccgagctggaatctggcgatgtaaacgaataccta
cagcaggtaactggcctcgcactatcggccaaggacttccggacctggggcggcaccgtg
aagatggtggagtgcctggaaaccgttatcaacgaggagcccgactttccgaagccgaaa
agcttgaaacgggcgttgcaagacgtagcgcacgaactcggcaacacgcccacggtttgt
tctaaatactacattcatcctcaggtggtcgagcttttcaataccgacaagctcatcgac
tacttgcgccgtcacgacgccgatccatccgaaaacgacctgcttacgcccaccgaacac
atggtgctcgatatgctagcagaactagaaggcgacgcggtgaagcaatag
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