Hymenobacter volaticus: MUN86_10885
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Entry
MUN86_10885 CDS
T09412
Name
(GenBank) GIY-YIG nuclease family protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hvl
Hymenobacter volaticus
Pathway
hvl03030
DNA replication
hvl03430
Mismatch repair
hvl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hvl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MUN86_10885
03430 Mismatch repair
MUN86_10885
03440 Homologous recombination
MUN86_10885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hvl03032
]
MUN86_10885
03400 DNA repair and recombination proteins [BR:
hvl03400
]
MUN86_10885
Enzymes [BR:
hvl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MUN86_10885
DNA replication proteins [BR:
hvl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MUN86_10885
DNA repair and recombination proteins [BR:
hvl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MUN86_10885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DEDDh_C
DNA_pol_A_exo1
DUF7508
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
UOQ68306
UniProt:
A0ABY4GBY7
LinkDB
All DBs
Position
complement(2507108..2508628)
Genome browser
AA seq
506 aa
AA seq
DB search
MYAIIDLETTGGQPTQDRITEIAIFIHDGEKVVDQYETLLNPGRSIPFFITQLTGITDDM
VREAPKFHEVARKVVEMTEGCVFVAHNVRFDYSFLKKEFADLGYNYSRKTLCTVRLSRSL
MPGQPSYSLGKLCQNIGIPLNGRHRAAGDAAATAILFDRLLKISQQDETIRDPSISAADT
LAAVDATAPSGRRPVTGTSDTTVATKQPSARKIKAVQDAIRTALLPPNITPTKVATLPHE
AGVYYFHNEQGEVIYVGKSINIYKRIQQHFAIDYKSRKSIEFKNSIADITWELTGSELVA
LLYESHEIKRLKPLYNRAQRRSVFPAGIFLRTDEQGYKHLYYGRADDHAESHPLIALGNQ
YKAKGFLFHKVAKFNLCQKLCDLYKTTGSCFDYQVHRCKGACIGLEPPDEYNVRVEQAIE
SFTYEHGSFVVVGKGRTELEKTVVLVENGRYLGFAYVDESFTARTLADFKAVITRYNDNK
DVQQIIRQYLRTKHKDKVKLFKNTNA
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
ttgtacgccatcatcgaccttgaaaccacagggggccagcctacgcaggaccgcatcacc
gaaatagccattttcattcatgatggcgaaaaggtggtagatcagtacgaaaccctactg
aaccctggccggtcaattcctttttttattacccagctcaccggcatcaccgatgatatg
gtgcgcgaggcacccaagtttcatgaggtagcacgcaaagtggtggaaatgacagagggc
tgcgtatttgtggcgcacaacgtacgtttcgattatagctttctgaaaaaggaatttgct
gacttaggctacaactattcgcgcaaaacgttgtgcacagtgcgcctgagccgttctctc
atgcctggtcagccaagctatagcttaggcaagctgtgccagaacattggcattccgctc
aacggccggcaccgcgccgccggcgacgccgctgctactgccatcctcttcgaccgactg
ctgaaaatcagccaacaagacgaaaccatacgcgacccaagtatttccgccgctgacact
ctagcggccgtagatgctaccgccccgagtggccgacgcccggttacgggcaccagtgac
accaccgtagcgaccaagcagccttcggcgcgcaagataaaagcggtgcaggatgctatc
cgcacggccttgctgccgccgaatatcacgccgactaaagtagcaacgctgccgcacgag
gcgggcgtttattacttccacaacgagcaaggggaggtgatttatgttggtaaaagcatc
aacatctataagcgcattcagcagcactttgccattgactacaagtcgcgcaagagcata
gaattcaagaattctattgccgacatcacctgggagctaacaggttcggaattggtggcg
ctgctttatgagtcgcacgaaatcaagcggctgaaaccgctttacaaccgtgcgcagcgc
cgttcggtgtttccggctggcatcttcctgcgcaccgacgagcaaggctataagcacctc
tactacggccgagccgatgaccacgccgaatcgcacccgcttattgcgctcggcaaccag
tacaaggccaagggctttctgtttcacaaagtagctaagttcaacctgtgccagaagcta
tgcgacctatacaaaaccaccggttcgtgcttcgactatcaggtacaccgctgcaaaggc
gcctgcattgggctagagccgccggatgaatataacgtacgagtcgagcaagccattgag
tcgtttacgtacgagcacggctcatttgtggtagtaggcaaaggccgaaccgagttggaa
aagaccgtggtgttggtggagaatggccggtatctgggttttgcctacgtagacgagagt
tttacagctcgtaccctcgctgatttcaaggcggttatcacgcgctataacgacaacaaa
gacgtacagcaaattatcaggcaatacctgcgcaccaaacacaaagacaaggtgaagcta
ttcaaaaacacgaacgcctga
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