Hymenobacter volaticus: MUN86_11120
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Entry
MUN86_11120 CDS
T09412
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
hvl
Hymenobacter volaticus
Pathway
hvl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hvl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MUN86_11120 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hvl03019
]
MUN86_11120 (pnp)
03016 Transfer RNA biogenesis [BR:
hvl03016
]
MUN86_11120 (pnp)
Enzymes [BR:
hvl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
MUN86_11120 (pnp)
Messenger RNA biogenesis [BR:
hvl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MUN86_11120 (pnp)
Transfer RNA biogenesis [BR:
hvl03016
]
Prokaryotic type
tRNA degradation factors
MUN86_11120 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
KH_1
RNase_PH_C
PNPase
KH-I_KHDC4-BBP
S1_RRP5
KH_2
Motif
Other DBs
NCBI-ProteinID:
UOQ68488
UniProt:
A0ABY4GC25
LinkDB
All DBs
Position
2556298..2558460
Genome browser
AA seq
720 aa
AA seq
DB search
MPNYNAVTKHITLPDGRQISIETGKLAKFADGAVVVRLGDAMLLATVVSQPSSRGDVDFL
PLSVDYQEKFGGAGKIPGSFQRREGRISDYEILVSRLVDRILRPMFPKDYHYEVQVLVTL
ISADKEVQPDALAALAASAALSVSDIPFAGPISEVRVARIDGKLQINPKTADIARADIDL
IVGATADSVAMVEGEMNEVSEEEMVEAIAYAHEAIKEQVRVQSELAAEIEKSHVKREYPK
YEENEELKQRITEAVYQRAYEVAKSGNTSKAGRKESFGAIKKPLLEELLTENPELDQKMF
GRYYGSAEKKAIRDMMIKERTRLDGRQLTEIRPIWSEVNYLPGAHGSALFTRGETQSLTT
VALGTKLDEQIIDSAMQSGYSKFMLHYNFPAFSTGEVKPNRGPGRREVGHGNLAMRSLKR
VLPAEEENPYTIRIVSDILESNGSSSMATVCAGSLALMDAGVKVRAAVSGIAMGLVQDKE
TGEYAVLSDILGDEDHLGDMDFKVTGTEKGIVACQMDIKIQGLSSEIMTAALHQAREGRL
HILGEMAKTINTPAADLKPHTPRSHKMLIDKEYIGAVIGPGGKVIQQIQKDTNATVIIEE
KDEKGHVSIYASNKEDMQAAISRIQAIAATPEVGETYKGKVRSIQPYGAFVEIMPGKDGL
LHISEVSHERLSALEGVLEVGQEIDVKLLDIDKKTGKYRLSRKVLLPKPERATEQNGTVQ
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgcccaactacaacgcggttaccaaacacattaccctgccggatggccggcagatttcc
attgaaactggcaaattggccaagttcgctgacggtgccgttgtggtacggctcggcgat
gccatgctcctggccacggtagtatcgcagccgagttcgcgcggcgacgtagacttcctg
cctttatcagttgattaccaggaaaaatttggtggtgctggtaagattcccggttcgttt
cagcgccgcgaaggtcgcatttccgactacgagattctggtgagtcgcctcgtagaccgc
attttgcgcccgatgttccctaaagactatcactacgaagtacaagtactcgttacgttg
atttcggccgataaagaagtgcaacccgacgcactcgctgctttggctgcttcggctgcc
ctgtcggtttccgatattccttttgctggtcctatctctgaagtacgggttgctcgtatc
gatggtaaactgcaaattaaccccaagacggcggacattgctcgcgctgatatcgacctg
attgtaggtgccaccgccgattcagtggccatggtagaaggggagatgaatgaagtgagc
gaggaggaaatggtagaagccattgcctacgcccatgaagcaattaaggagcaagtacgc
gtccagagcgaattggctgctgaaattgagaagtcgcacgttaagcgcgagtatccgaag
tacgaggaaaacgaagagctaaagcagcgtattaccgaagctgtttatcagagagcttac
gaggttgccaagtcgggtaataccagcaaagcaggccgcaaagagtctttcggggctatc
aagaagccactactggaagaattactaactgaaaatccggagctcgatcagaagatgttt
ggccgttactacggttcggctgagaagaaggcaatccgcgatatgatgatcaaggaacgc
acgcgtctcgatggtcgtcagctcacggaaattcgccctatttggtctgaagtcaactat
ctgcccggtgcgcacggttcggccttgtttacccgtggcgaaactcaatctttgaccacg
gtagcccttggtactaagctcgacgagcagattatcgactcggctatgcaatcggggtac
agcaagtttatgctgcattacaacttcccggccttctcgaccggcgaagtgaagccaaac
cgcggccctggccgccgcgaagttggccacggtaacttggctatgcgctcgttgaagcgg
gtgttgcctgccgaagaagaaaacccttacaccatccgcatcgtgtcggacatcttggag
tcgaacggctcttcgtcgatggccacggtatgcgctggctcgctggcgctgatggacgcg
ggcgttaaagtgcgcgctgccgtttcgggtattgccatgggcttggtgcaagacaaggaa
accggtgaatacgctgtactgagcgacattctcggcgatgaggaccacctcggtgacatg
gacttcaaagtaacgggcaccgaaaagggtatcgtagcttgccagatggacatcaaaatc
cagggcttgagcagcgaaatcatgacggcagctttgcaccaggcccgcgaaggccggttg
cacatcctcggtgagatggccaaaaccatcaacaccccggcagccgacttgaagccacat
acgccccgctcgcacaagatgctcatcgataaagaatatatcggtgctgttatcgggccc
ggcggcaaggttattcagcagattcagaaggataccaacgccacggttatcatcgaagag
aaggacgagaaaggccacgtgagcatctacgcttccaacaaggaagatatgcaagccgct
atcagccgaattcaagccattgccgctacgccagaagtaggcgaaacctacaaaggcaaa
gtgcgcagcattcagccctacggtgcttttgtagagattatgccgggtaaagatggcctg
ttgcacatctcggaggtatcgcacgagcgcctttcagcgctggaaggcgtactcgaggta
gggcaggagatagacgtgaaactgctcgacatcgacaagaaaacgggcaagtaccgctta
tcgcgtaaggttcttttgccgaagccagaacgggcaaccgaacagaacggtacggttcaa
taa
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