Hymenobacter volaticus: MUN86_14075
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Entry
MUN86_14075 CDS
T09412
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
hvl
Hymenobacter volaticus
Brite
KEGG Orthology (KO) [BR:
hvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hvl03016
]
MUN86_14075
Enzymes [BR:
hvl01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
MUN86_14075
Transfer RNA biogenesis [BR:
hvl03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
MUN86_14075
Prokaryotic type
tRNA splicing ligases
MUN86_14075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
UOQ64696
UniProt:
A0ABY4G1L7
LinkDB
All DBs
Position
complement(3215435..3216838)
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AA seq
467 aa
AA seq
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MGNLLRGNDLRQLGFPEGRAIGLALAQLQRKHLKKLSQTDQLALLQRLLATPNDFLTDLD
WSHTAAALLPPPSRHIALAERKEYAVFGAEHIEHGAIHQMETAMKLPVTVAGALMPDAHH
GYGLPIGGVLATDNAVIPYAVGVDIGCRMALSVFALPPKHLEQRIQELRKLLLDNTRFGN
KQGFQRGQKLDHAVLDRAEFQDIGFLRNKQATAAEQIGTSGGGNHFVEWGIVNITDSSND
LGVPVGEYLGLLSHSGSRGLGASVANHYTKLAKDVCQLPSEAQHLAWLSLDSEAGQEYWA
AMNLAGDYASACHHQIHQRLAKALGERPLAKVENHHNFAWKERLADGRAAIVHRKGATPA
GEGVLGIIPGSMTAPGFIVRGRGNPASLASASHGAGRAMSRTRAKQELGEAEVKRYLQQH
NIELIGGGLDEAPQAYKDIRTVMASQTELVDVLGSFSPRIVRMEGGA
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgggcaatcttttacgcggcaacgaccttcggcagcttggcttcccggaaggtcgggcc
atcggactggcgctagcacaattgcagcgcaagcatctcaaaaaactctcgcaaaccgat
caactagcgctgttgcagcgcctactcgcaacacccaacgatttcctcaccgacctcgac
tggagccatacggccgccgcgttgctgccacctcctagccgccacattgccttagccgag
cgcaaggagtacgccgtatttggggctgagcacatagagcatggggccattcatcaaatg
gaaacggccatgaagttgcccgtgacggtggctggcgccctcatgcccgatgcgcaccac
ggctacggcttgcctattgggggcgtattagccaccgataacgccgttattccctacgcc
gttggcgtggatattgggtgccggatggcgctgtcggtgtttgccttgccgcccaagcac
ctagagcaacggatacaggaactgcgcaagttgctcctcgacaacactcgtttcggcaac
aagcaaggctttcagcgcggccagaagcttgaccacgccgtgctagaccgcgccgaattc
caggacatcggatttctgcgcaacaagcaagctacggcagccgagcaaattggcacctcg
ggcggcggcaaccactttgtggagtggggtattgtcaacattactgattctagcaacgat
ctaggcgtaccggtaggggagtacctaggtctgctttcgcactccggctctcggggcttg
ggcgctagcgtggccaaccactacaccaaactcgccaaagatgtgtgtcaactgccctcg
gaagcgcaacacctcgcgtggctttccctcgacagcgaagccgggcaagagtattgggcg
gctatgaatctggccggggactacgcttcggcctgtcaccaccaaatacaccagcgccta
gccaaagcccttggggagcggcccctagcgaaagtggaaaaccaccacaacttcgcctgg
aaagagcgcctagccgatggccgcgcagcaattgtgcaccgcaagggcgcgacgcccgcc
ggtgaaggcgtgctcggcatcatccccggctcgatgacggctcctggcttcattgtgcgc
ggccggggcaatccagcgtcgttggcttcagcttcgcacggggccggtcgggccatgtcg
cggacgcgggccaagcaagaactcggcgaggccgaggtgaaacgctacctccagcagcac
aacatcgagctgattggaggcggcctcgacgaagcaccgcaagcctacaaggatatccga
accgtcatggccagccagaccgaactggtagatgtgctcgggtctttctccccgcgcatc
gtgcgaatggaaggtggcgcttaa
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