Hymenobacter volaticus: MUN86_18395
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Entry
MUN86_18395 CDS
T09412
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
hvl
Hymenobacter volaticus
Pathway
hvl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hvl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MUN86_18395 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hvl03019
]
MUN86_18395 (recQ)
03400 DNA repair and recombination proteins [BR:
hvl03400
]
MUN86_18395 (recQ)
Enzymes [BR:
hvl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MUN86_18395 (recQ)
Messenger RNA biogenesis [BR:
hvl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MUN86_18395 (recQ)
DNA repair and recombination proteins [BR:
hvl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MUN86_18395 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RecQ-1-like_HTH
RQC
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
HTH_40
Motif
Other DBs
NCBI-ProteinID:
UOQ65494
LinkDB
All DBs
Position
4228012..4230213
Genome browser
AA seq
733 aa
AA seq
DB search
MSMPAVNNVISQGADLKGKLKEVFGYGQFRGTQEAIIQNVIEGHNTFVIMPTGAGKSLCY
QLPALVLPGTAIVISPLIALMKNQVDQLNAFGVNAQFLNSTLTKAEMNRVKKDVISGEVK
LLYVAPESLTKDETIDFLQKATVSFVAIDEAHCISEWGHDFRPEYRRIRGIIDNIGQVPI
IALTATATPKVQLDIQKNLQMDDASVFKTSFNRTNLYYEVRPKHNTKKQLIQYVKQRKGL
AGIIYCLSRKKVEEIAELLKVNDVRALPYHAGLDPHVRMANQDAFLNEDCDVIVATIAFG
MGIDKPDVRFVIHYDTPKSIEGYYQETGRGGRDGLDGDCLMFYSYDDIVKLEKFNKDKPV
TERDNSKLLLQEMANYADSAVCRRKQLLHYFGEHFEKDCGFCDNCKHPKERFEAQREVEL
ALKAVVQTEQRFGLDHIGTVLMGMNNAHVESYGHNGLPIYGQGKDHDAQYWHSLLRQCLI
FGLLEKDIENFGVVKISEKGMDFIENPYSMKLTKDHDYDEEVKEEQEQEEVQQAAGHDEA
LFEMLKALRKKIAKEKELPPYVLFQDPSLKEMATTFPTKLEELAHVGGVGQGKAQKFGPP
FLALIKKYVEENDIMTASDVVVKSAVNKSKIKIYIIQQIDKKMDLEEIASSKGIDMRELM
EEIEHICYAGTKLNLDYYINGILDEERQEEIYDYFMSANTDNIAVALKELGTDDYTEEDL
RLMRIKFLSEVAN
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatgccagccgtgaacaatgtaatcagccaaggagctgatttgaagggcaagtta
aaggaagtttttgggtacgggcagttccgcggtacgcaggaagccattatccagaacgtt
attgaggggcataataccttcgttataatgcctaccggagccggcaaaagcctttgctac
cagctcccagccctggtactgcccggcacggccattgttatctctccgcttatcgccctg
atgaaaaatcaggtggaccagcttaatgccttcggcgtgaatgcccagttcctgaactcg
accttaaccaaggccgaaatgaaccgggtgaagaaagacgtgattagcggcgaggtaaag
ctgctctatgtagcgcccgagtcgctgaccaaagacgaaaccatcgattttctgcagaaa
gctaccgtttcgttcgtcgccatcgacgaggcgcactgtatttcggaatggggccacgat
ttccggccggagtaccgccggattcgcggcatcatcgacaatattgggcaggtacctatt
attgccctcacggccactgccacgcccaaggtgcagctcgacatccagaaaaacctgcag
atggacgatgcgagtgtctttaaaacgtcgttcaatcgcactaacctctactacgaagtt
cggcccaagcacaacaccaaaaagcagctgattcagtatgtgaagcagcgcaaaggcttg
gccggtattatttattgcctcagccgcaaaaaggtagaagaaattgctgagctgctgaaa
gtcaatgatgtccgggccctcccctaccacgctggcctcgacccgcacgtgcgcatggcc
aaccaagacgctttcctcaacgaggactgcgacgtgattgtggcgaccattgcctttggt
atgggcatcgacaaacccgacgtgcgcttcgtgattcactacgacactccgaagagcatc
gagggctactatcaggaaaccggccgcggcggccgcgacggcctcgatggcgactgcctg
atgttctacagctatgatgacatcgtgaagctggagaaattcaacaaagacaagcccgta
acggagcgcgacaacagcaagctgctgctccaagaaatggccaactatgccgactcggcg
gtgtgtcggcgcaagcagttgctgcattacttcggcgagcatttcgagaaagattgcggc
ttctgtgacaactgcaagcacccaaaggaacggtttgaagcgcaacgcgaggtggaacta
gccttgaaagcagttgtgcagaccgagcagcgtttcggcctcgaccacatcggcactgtg
ctgatgggcatgaacaatgcccacgtagaaagctacggccacaatggcttgcccatctac
ggtcaaggaaaggaccacgacgcgcagtattggcattcgctgttgcggcagtgtttgatc
tttggtttattagagaaagacatcgagaatttcggtgtcgtaaaaatctccgaaaaggga
atggacttcattgaaaatccttattcaatgaagctcacgaaggaccacgactacgacgaa
gaagtgaaagaagagcaggagcaagaagaggtgcagcaagccgctggccacgacgaagcc
ctgttcgagatgctgaaagcccttcggaagaagattgccaaggaaaaggaactgccaccc
tacgttctctttcaggatccgtcgctcaaggaaatggctactacgttcccaactaagctg
gaggaactagcccacgtgggaggtgtcggccaaggcaaggcgcagaagtttgggcctcca
tttttggcgctcatcaagaaatacgtcgaggaaaacgacatcatgacggcctccgacgtg
gtagtgaagtcagccgttaacaagtcgaaaatcaagatttatatcattcagcagatcgat
aagaagatggacctagaggaaattgcttcctcgaagggcatcgatatgcgcgagttgatg
gaagaaatcgagcatatctgctacgctggcaccaagctcaacctcgactattatatcaac
ggcattctggacgaagagcgccaagaggaaatctacgactacttcatgtctgctaatacc
gacaacattgcggtagccctcaaagagctaggcaccgacgactacaccgaagaggaccta
cgcctgatgcgtatcaagtttctaagtgaagtagctaactag
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