Hymenobacter volaticus: MUN86_21315
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Entry
MUN86_21315 CDS
T09412
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
hvl
Hymenobacter volaticus
Pathway
hvl02020
Two-component system
hvl02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
hvl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MUN86_21315 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MUN86_21315 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hvl03021
]
MUN86_21315 (rpoN)
Transcription machinery [BR:
hvl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MUN86_21315 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
HTH_12
SF3b1
Motif
Other DBs
NCBI-ProteinID:
UOQ66021
LinkDB
All DBs
Position
4880787..4882361
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AA seq
524 aa
AA seq
DB search
MKQLLSQKLSPQQIQFIKLLQIPTAELEARIKEELEANPALEEGDDADDEVEDQERDDDS
ADEADDFDDPDAEFDNPDNTLDEDFDNDNQIEEQPEIDLSAKDEPTEQTETSNDDLDLSD
YLNDDEIAGYKMQGDGPGEDEDDREMPLADTSGSLIDSLIDQLGFADLDEKQEAIGRQLV
GSIDNDGYIRRDLSAIANDLAFSQNIEASVQEIEAVLHLVQSFDPPGIGARDLQECLLLQ
LERRPQDEATEHAERILNEMFDEFTKKHYQRIQQRLDLEDDELKDAIALILKLNPKPGGS
GPVGGGKVQYVIPDFILTNDNGVFNLTLNSRNAPDLRVSPAYTEMFRAYDKGAKKDKKLK
EAVTFVKQKLDSAKWFIDAIRQRQNTLLRTMDAIVRYQREFFQEGDESKLRPMILKDIAQ
EINMDISTVSRVANSKSVQTEFGIYPLKYFFSEGIATDSGEDASSREVKHILKEIIEGEK
KDRPLSDDKLEKMLNARGYNIARRTVAKYREQLNIPVARLRKEL
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagcttctctcgcagaagctgtcgccccaacagatacaattcattaagctgctg
caaattccgacggcggagctggaagcccgcatcaaggaagagctggaagctaaccctgct
ttggaggaaggcgacgatgccgacgacgaagtagaagatcaagagcgtgatgacgactcg
gctgatgaagctgatgatttcgacgaccccgatgccgagtttgataatccagacaacaca
ctggacgaggacttcgacaacgacaaccaaatcgaagagcaaccggaaatagatttgtct
gccaaggacgagcccacagagcaaaccgaaaccagcaacgacgacctcgacctgagcgac
tacctcaacgacgacgaaatagcgggttacaagatgcagggcgacggcccgggcgaagac
gaagacgaccgggaaatgcccctggccgataccagcggttcccttatcgacagcttgatc
gaccagctaggttttgccgaccttgatgaaaaacaggaagccattggacgccagctggtt
ggctccatcgacaacgacggctacattcgccgcgacttatcggctattgctaacgacttg
gctttctcgcagaacatcgaagcttcagtgcaagaaattgaagcggtactgcacttggta
caaagcttcgatccaccgggcattggcgcacgagacttgcaggaatgtctactgctgcaa
ctcgagcgccgtccgcaggacgaagcaaccgagcacgccgaacggattctgaacgagatg
ttcgatgagttcaccaagaagcattatcaacgcattcagcagcggctggacctagaagac
gacgaactcaaggatgctattgcgctcattctgaagctgaaccccaagcccggcggcagt
ggtccggtaggcggcggcaaggtgcaatacgtcattcctgactttatcctgaccaacgac
aacggcgtattcaacctcacgctcaactcgcgtaatgcccccgatttgcgggtatctccg
gcgtacacagaaatgttccgggcttacgataaaggcgccaagaaagacaagaagctaaag
gaggccgtcacgtttgtaaagcaaaagctggattcggccaagtggtttattgatgccatc
cggcagcgccagaacacgttgctccggaccatggatgccattgtgcgctaccagcgggaa
ttctttcaagagggcgacgaaagtaagttacgtcctatgattctgaaggatattgcgcag
gaaatcaatatggatatcagtaccgtgagccgggtagccaactcgaaatcggtgcaaaca
gagttcggcatttaccccctcaagtatttcttctccgaaggcattgccaccgactcaggc
gaagatgcatcgagccgagaggtgaagcacattctgaaggaaattatcgaaggcgagaag
aaagaccgtcctctctccgacgataagctggaaaagatgcttaacgcccgcggctacaat
attgctcgccgcacagtcgccaaataccgcgaacagctgaacattccggtggctcgcctg
cgtaaggagctgtaa
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integrated database retrieval system
