Hymenobacter volaticus: MUN86_29420
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Entry
MUN86_29420 CDS
T09412
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
hvl
Hymenobacter volaticus
Pathway
hvl02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
hvl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MUN86_29420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hvl03021
]
MUN86_29420
Transcription machinery [BR:
hvl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MUN86_29420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
UPF0122
GerE
HTH_20
HTH_5
HTH_10
DUF6680
HTH_40
Motif
Other DBs
NCBI-ProteinID:
UOQ69625
LinkDB
All DBs
Position
unnamed6:121755..122351
Genome browser
AA seq
198 aa
AA seq
DB search
MSSSLRFYASWTDAALLEALAMDNRGAFAEIYERYWYRVFALAYRKLKSRETAEELVQEL
FATLWHKRTQQTIEQLEHYLLVAINRRVIGYIRAHRIRTHYADYCRNLQVEETHETEDTL
AVADLSAAFLRGVEQLPEKSREVFRLSRLEHQSVEEIATRLDVTPKAVEYHLTKSLKLLR
TYLREFLVALLPLLFFIR
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
gtgagctcctctctccggttttatgcttcttggactgatgctgccttgctggaagcattg
gcaatggataaccggggggctttcgctgaaatatatgagcggtactggtatcgggtgttt
gcgttggcctaccgcaagttgaaatcgcgggaaacagcggaagaactagttcaggaactg
tttgctaccctctggcacaagcggacccagcagaccattgagcagttggagcattactta
ctggtcgcaatcaaccgccgggtgattggctacattcgtgcccaccggatacgaacgcac
tacgccgattactgccgcaacttgcaagttgaagagacgcacgaaaccgaagacacgctg
gctgttgccgacttgtcggccgctttcttgcggggcgtagagcaactgcccgagaagtcg
cgggaagtatttcgtttaagtcgattagagcaccagtcggtagaggaaatagctacccgg
cttgacgtgactcccaaagcagttgaataccacctaaccaaatcgttgaagttgctgcgc
acgtacttgcgagaattccttgttgcgttgctgccccttctcttttttatacgctga
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